Gene Details:
- Gene ID: AT3G16150
- Gene Symbol: ASPGB1
- Gene Name: asparaginase B1
- Description: N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11)
- TAIR Accession: locus:2093387
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0016540 — involved in — protein autoprocessing
- GO:0004067 — enables — asparaginase activity
- GO:0005737 — is active in — cytoplasm
- GO:0005737 — located in — cytoplasm
- GO:0008798 — enables — beta-aspartyl-peptidase activity
Germplasm Phenotype:
- CS67894 — increased sensitivity to inhibition of root elongation by exogenous asparagine
- CS67895 — increased sensitivity to inhibition of root elongation by exogenous asparagine
- CS67896 — Increased sensitivity to delay in root hair emergence in response to exogenous asparagine. Increased accumulation of asparagine in root when grown on medium containing asparagine as a single nitrogen source. Increased seed size under conditions of nitrogen deficiency. Increased concentration of free asparagine and other free amino acids in seed when grown under low illumination.
- CS67896 — increased sensitivity to inhibition of root elongation by exogenous asparagine
- CS67896 — increased sensitivity to inhibition of root elongation by exogenous asparagine; increased accumulation of asparagine in root on asparagine-containing medium; increased seed size under conditions of nitrogen deficiency; increased concentration of free asparagine and other free amino acids in seed when grown under low illumination.
- SALK_082112 — increased sensitivity to inhibition of root elongation by exogenous asparagine
- WiscDsLox382A10 — increased sensitivity to inhibition of root elongation by exogenous asparagine
Function-related keywords:
- fruit , vascular leaf , flower , pollen tube cell , pollen
Literature:
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- Large-scale analysis of mRNA translation states during sucrose starvation in arabidopsis cells identifies cell proliferation and chromatin structure as targets of translational control. DOI: 10.1104/pp.106.079418 ; PMID: 16632591
- Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field. DOI: 10.1007/s11103-006-9041-y ; PMID: 16941220
- The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance. DOI: 10.1105/tpc.108.059444 ; PMID: 18682547
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
- Response diversity of Arabidopsis thaliana ecotypes in elevated [CO2] in the field. DOI: 10.1007/s11103-006-9041-y ; PMID: 16941220
Sequences:
cDNA Sequence
- >AT3G16150.1
CCATCATTCTCGGTTTAACTGTGAAACACATAAATAAAACAAAGAGAAAGAGAGAGAATATGGGTGGGTGGGCAATCGCAGTACACGGTGGTGCCGGTATCGACCCTAATCTTCCGGCGGAGAGACAAGAAGAGGCTAAACAGCTTTTAACTCGTTGTCTCAACCTCGGCATAATAGCTTTGCGTTCCAATGTCTCCGCCATTGACGTCGTTGAGCTCGTCATTAGAGAATTGGAGACGGATCCTCTGTTTAATTCAGGCCGTGGATCTGCTTTGACGGAAAAAGGAACGGTTGAGATGGAAGCTAGCATTATGGACGGTACGAAGAGACGATGCGGTGCCGTTTCGGGGATAACCACCGTGAAAAATCCTATATCTCTTGCTCGTCTCGTCATGGACAAATCTCCCCACTCTTACCTTGCTTTCTCAGGTGCAGAGGATTTCGCCCGCAAACAGGGAGTTGAAATTGTGGACAACGAGTACTTTGTCACGGACGACAACGTAGGAATGCTCAAGTTGGCCAAGGAAGCTAACTCCATCTTGTTTGATTACCGGATTCCGCCGATGGGATGTGCCGGTGCAGCTGCGACCGACAGTCCAATCCAAATGAACGGTCTTCCGATCAGCATTTACGCACCGGAGACAGTCGGGTGCGTTGTGGTTGACGGGAAAGGACATTGTGCCGCCGGGACATCCACGGGTGGTTTAATGAACAAGATGATGGGAAGGATTGGTGACTCGCCGCTGATAGGAGCCGGGACGTATGCGTCGGAGTTTTGTGGTGTGTCGTGTACCGGAGAAGGAGAAGCCATTATAAGAGCAACCCTAGCTCGTGATGTGTCAGCTGTTATGGAGTATAAAGGACTTAACCTCCAAGAAGCGGTTGATTACGTCATCAAGCATCGACTTGACGAAGGGTTCGCTGGACTCATTGCTGTCTCGAATAAAGGAGAGGTGGTTTGTGGTTTTAACTCTAATGGGATGTTCAGGGGATGTGCAACTGAGGATGGATTCATGGAGGTTGCTATTTGGGAGTGAGAAATATTTTAGATTAAGAAAATGTCTTACTAGTATTTAATCAGTCATCGCTCTATTAATTTGGTTATTCATTATCATAAAGCTGGAGGAGTAAATTTAGTTATGTCGTTATCACCAGTCCTATATTGATTTGTGTTTAATGCGGTTTCAAATGGTTAGTTCGTGTTTAAAATTGTTGATCTGTCTCAGCTCCATGCCTAATCAAGAAACTATGGTTCAGCTCTCTGTTTCTTGTATGAACCTTACCTGTCATAAATAGCAACAAAAAAGTGCAGTAATTGGATTTATTTGAGGATGGAGGGATTATCAAAATGAGATGGAATTATT
CDS Sequence
- >AT3G16150.1
ATGGGTGGGTGGGCAATCGCAGTACACGGTGGTGCCGGTATCGACCCTAATCTTCCGGCGGAGAGACAAGAAGAGGCTAAACAGCTTTTAACTCGTTGTCTCAACCTCGGCATAATAGCTTTGCGTTCCAATGTCTCCGCCATTGACGTCGTTGAGCTCGTCATTAGAGAATTGGAGACGGATCCTCTGTTTAATTCAGGCCGTGGATCTGCTTTGACGGAAAAAGGAACGGTTGAGATGGAAGCTAGCATTATGGACGGTACGAAGAGACGATGCGGTGCCGTTTCGGGGATAACCACCGTGAAAAATCCTATATCTCTTGCTCGTCTCGTCATGGACAAATCTCCCCACTCTTACCTTGCTTTCTCAGGTGCAGAGGATTTCGCCCGCAAACAGGGAGTTGAAATTGTGGACAACGAGTACTTTGTCACGGACGACAACGTAGGAATGCTCAAGTTGGCCAAGGAAGCTAACTCCATCTTGTTTGATTACCGGATTCCGCCGATGGGATGTGCCGGTGCAGCTGCGACCGACAGTCCAATCCAAATGAACGGTCTTCCGATCAGCATTTACGCACCGGAGACAGTCGGGTGCGTTGTGGTTGACGGGAAAGGACATTGTGCCGCCGGGACATCCACGGGTGGTTTAATGAACAAGATGATGGGAAGGATTGGTGACTCGCCGCTGATAGGAGCCGGGACGTATGCGTCGGAGTTTTGTGGTGTGTCGTGTACCGGAGAAGGAGAAGCCATTATAAGAGCAACCCTAGCTCGTGATGTGTCAGCTGTTATGGAGTATAAAGGACTTAACCTCCAAGAAGCGGTTGATTACGTCATCAAGCATCGACTTGACGAAGGGTTCGCTGGACTCATTGCTGTCTCGAATAAAGGAGAGGTGGTTTGTGGTTTTAACTCTAATGGGATGTTCAGGGGATGTGCAACTGAGGATGGATTCATGGAGGTTGCTATTTGGGAGTGA
Protein Sequence
- >AT3G16150.1
MGGWAIAVHGGAGIDPNLPAERQEEAKQLLTRCLNLGIIALRSNVSAIDVVELVIRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGITTVKNPISLARLVMDKSPHSYLAFSGAEDFARKQGVEIVDNEYFVTDDNVGMLKLAKEANSILFDYRIPPMGCAGAAATDSPIQMNGLPISIYAPETVGCVVVDGKGHCAAGTSTGGLMNKMMGRIGDSPLIGAGTYASEFCGVSCTGEGEAIIRATLARDVSAVMEYKGLNLQEAVDYVIKHRLDEGFAGLIAVSNKGEVVCGFNSNGMFRGCATEDGFMEVAIWE