Information report for AT3G16140
Gene Details
|
|
Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0009535 — located in — chloroplast thylakoid membrane
- GO:0009409 — acts upstream of or within — response to cold
- GO:0009534 — located in — chloroplast thylakoid
- GO:0009507 — located in — chloroplast
- GO:0044255 — acts upstream of or within — cellular lipid metabolic process
- GO:0005829 — located in — cytosol
- GO:0009538 — part of — photosystem I reaction center
- GO:0019538 — acts upstream of or within — protein metabolic process
- GO:0015995 — acts upstream of or within — chlorophyll biosynthetic process
- GO:0003674 — enables — molecular_function
- GO:0009645 — acts upstream of or within — response to low light intensity stimulus
Functional Keywords
Literature and News
- Effects of leaf ascorbate content on defense and photosynthesis gene expression in Arabidopsis thaliana. DOI: 10.1089/152308603321223513 ; PMID: 12626114
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves. DOI: 10.1104/pp.104.044347 ; PMID: 15347792
- Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. DOI: 10.1074/jbc.M406358200 ; PMID: 15561727
- The MAP kinase substrate MKS1 is a regulator of plant defense responses. DOI: 10.1038/sj.emboj.7600737 ; PMID: 15990873
- Comparison of lignin deposition in three ectopic lignification mutants. DOI: 10.1111/j.1469-8137.2005.01496.x ; PMID: 16159327
- Protein profiling of plastoglobules in chloroplasts and chromoplasts. A surprising site for differential accumulation of metabolic enzymes. DOI: 10.1104/pp.105.076083 ; PMID: 16461379
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- DELAYED GREENING 238, a Nuclear-Encoded Chloroplast Nucleoid Protein, Is Involved in the Regulation of Early Chloroplast Development and Plastid Gene Expression in Arabidopsis thaliana. DOI: 10.1093/pcp/pcw172 ; PMID: 27818379
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: Q0WWU6
- EMBL: AK226239, BT028906
- AlphaFoldDB: Q0WWU6
- EnsemblPlants: AT3G16140.1
- Gramene: AT3G16140.1
- KEGG: ath:AT3G16140
- Orthologous matrix: DMENTTG
- ExpressionAtlas: AT3G16140
- InterPro: IPR004928
- PANTHER: PTHR34787, PTHR34787:SF2
- Gene3D: 1.20.5.220
- OrthoDB: Q0WWU6
- SWISS-MODEL: Q0WWU6
Sequences
cDNA Sequence
- >AT3G16140.1
CCTTATCCTACTAGATTCCACGTGGCATTTTCCAAGTGGCGTAAGAAAATCCCCGGGAGGAAATCAGTTGCCACGTGTCAGAAGAAGATCAAAACTCGACTCATTGTGACCAAAGGCTATTATTTCCTACACAAAATTCCCACTCACCACACACAACAAAAGAATAGTGATCGAAGCTCATGGCGTCTCTTGCAACCGTCGCCGCTGTGAAACCATCCGCCGCCATAAAAGGACTCGGCGGCAGCTCACTCGCCGGAGCTAAGCTCTCCATCAAGCCTTCCCGCCTGAGCTTTAAACCCAAATCCATCCGGGCTAATGGTGTGGTGGCTAAGTATGGAGACAAAAGTGTCTACTTTGACTTAGAAGATTTGGGTAACACAACAGGTCAATGGGACGTATACGGCTCTGATGCTCCTTCTCCTTACAATCCTCTTCAGAGCAAGTTCTTTGAGACATTCGCTGCCCCATTCACAAAGAGAGGATTGCTCCTCAAGTTCTTGATCCTTGGAGGAGGCTCTTTGCTTACTTATGTCAGCGCTACCTCTACCGGCGAAGTTCTTCCCATCAAGAGAGGTCCTCAGGAGCCGCCTAAGCTCGGTCCTCGCGGCAAGCTCTGATCTATATTCATGTTACCTTTCTCTTCTTCCTTCTAAAACTCATCAACATTTCTCAATACTGCAAACCCTTTTAAGTAATTTTATGTATATTCTGTTTATCTGTTACATTTGAAACGTTTTTTCTTCCCCTAATTTTACAAAAGAAATATTTTTTTTTTCAAGAGTATCGCCCCGCGGTTGGACTTCTTGTGGTTCCAAGAGATTCAAGATAAGTAGTCTTCTTGTTGTTAGACATGATCATGCTTGACACTCTGGTTAAAAGTTTCTTGTCGCTCTTTTCTTTCCTCGGTTCATTGGTTTCGATATTCCATTGCATTACCTCAGATAGTGAAATGGTAGGCTTCTGCTTTTTAGGTCTATCTTCTAAAAGACAAAAATTTGGCTCTTCTTCCTTCTCTGGACTCTCTGTTTCCTTCACTATATGGATCTTACACATCGCGAGCTCAGGGTTTTGTGTTAGCTGATCAGCTTCAAGAACATCTTCTATTCTTGACATTACCGTGTGAGCCAAGCTTTCAAGAATTCTCGAATAACTCTCCACTATAGCTAACCCTATATCCTGCAAAAAAAAACAAATTAATGATTTTCGTAAAACAGAAGACAAACAATTATATGTCTAATGTGACTTTAATATAAAGTTATATGATTGATTACTCTGTTGAATTGAATCTTGCTGATGTCAA
CDS Sequence
- >AT3G16140.1
ATGGCGTCTCTTGCAACCGTCGCCGCTGTGAAACCATCCGCCGCCATAAAAGGACTCGGCGGCAGCTCACTCGCCGGAGCTAAGCTCTCCATCAAGCCTTCCCGCCTGAGCTTTAAACCCAAATCCATCCGGGCTAATGGTGTGGTGGCTAAGTATGGAGACAAAAGTGTCTACTTTGACTTAGAAGATTTGGGTAACACAACAGGTCAATGGGACGTATACGGCTCTGATGCTCCTTCTCCTTACAATCCTCTTCAGAGCAAGTTCTTTGAGACATTCGCTGCCCCATTCACAAAGAGAGGATTGCTCCTCAAGTTCTTGATCCTTGGAGGAGGCTCTTTGCTTACTTATGTCAGCGCTACCTCTACCGGCGAAGTTCTTCCCATCAAGAGAGGTCCTCAGGAGCCGCCTAAGCTCGGTCCTCGCGGCAAGCTCTGA
Protein Sequence
- >AT3G16140.1
MASLATVAAVKPSAAIKGLGGSSLAGAKLSIKPSRLSFKPKSIRANGVVAKYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSATSTGEVLPIKRGPQEPPKLGPRGKL