Information report for AT3G16000
Gene Details
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Functional Descriptions
- GO:0009535 — located in — chloroplast thylakoid membrane
- GO:0019252 — acts upstream of or within — starch biosynthetic process
- GO:0005515 — enables — protein binding
- GO:0009534 — located in — chloroplast thylakoid
- GO:0009507 — located in — chloroplast
- GO:0042646 — located in — plastid nucleoid
- GO:0010581 — acts upstream of or within — regulation of starch biosynthetic process
- GO:0005829 — located in — cytosol
- GO:0003677 — enables — DNA binding
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation. DOI: 10.1242/jcs.00715 ; PMID: 12953064
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome-wide identification of Arabidopsis coiled-coil proteins and establishment of the ARABI-COIL database. DOI: 10.1104/pp.103.035626 ; PMID: 15020757
- Effectiveness of RNA interference in transgenic plants. DOI: 10.1016/j.febslet.2004.04.043 ; PMID: 15147899
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Coffee and tomato share common gene repertoires as revealed by deep sequencing of seed and cherry transcripts. DOI: 10.1007/s00122-005-0112-2 ; PMID: 16273343
- DNA demethylation in the Arabidopsis genome. DOI: 10.1073/pnas.0701861104 ; PMID: 17409185
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Putative Arabidopsis homologues of metazoan coiled-coil cytoskeletal proteins. DOI: 10.1042/CBI20100719 ; PMID: 21284606
- Two Plastidial Coiled-Coil Proteins Are Essential for Normal Starch Granule Initiation in Arabidopsis. DOI: 10.1105/tpc.18.00219 ; PMID: 29866647
- STARCH SYNTHASE5, a Noncanonical Starch Synthase-Like Protein, Promotes Starch Granule Initiation in Arabidopsis. DOI: 10.1105/tpc.19.00946 ; PMID: 32471861
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A654F9A6
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F9A6
- EnsemblPlants: AT3G16000.1
- Gramene: AT3G16000.1
- KEGG: ath:AT3G16000
- Orthologous matrix: NVKTHFI
- ExpressionAtlas: AT3G16000
- SUPFAM: SSF57997
- SWISS-MODEL: A0A654F9A6
Sequences
cDNA Sequence
- >AT3G16000.1
AAAAAAAGTTTCAGTCTTTGATACCCAATTTCGTAGGATTTGTAGATATTTTCTTCAGTAATCGAAGGATATAACTCTGAGATTTGTGTAAGCATTCTTCTTTGAGATTTTCCGAGGTCACAAGTCAGTACACAAAGGAAGTTCCTTTTTTGGGTTTTGGGGTCTGCTTTGTGTCAGTGATTTTAGGATTGCTTCATTTGCCACACATTTCCAATCTCTTAAGTAGTTGGCGGCGAAGATGGGTTTCCTGATAGGGGGCTCTTGCTTCGTCCCTTCTGTTCCTCTACACTCTCGATTCCTTTCATCTCCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCGTCTCAGTTTGGGCTTCTGTGTTCGAGTAATGTCGCCAAGTTCAAGCGCCGACGACCAACATTGGCTTCTTTAAACCAGGAAGATGGGTACGAGTATGACGTTGCTTCCGCCAAAAGGAGGGCTTTCCTTCTTGTGGGTATCTCTGTTCTTCCCTTTTTGCAGCTTCGATCACCCGCTTTGGCTGATGAAAGAGGCAATGAGATAAAGACATCGAAGGTTGATCTAGAAACTGAGGTTGCAGTAGTTAGTGAAGGAACATCCCCAAATCCATTTCTGGCTCTCCTGAATGGTCTTGGAATTTTTAGTGCTGGCGTTCTTGGTGCACTTTATGCACTGGCTCGGCAAGATACAAAAGCTGCTGAGGAAACCATCGAATCTCTAAAGAACCAGTTGAAAGACAGAGAAAGAGCATTGGTTTTGAAGGAGAAAGATTTCGAGGCAAAACTGCAGCATGAGCAGGAAGAGCGGAAAAAGGAAGTAGAAAAGGCAAAAGAGGAACAGTTGTCATTGATCAACCAGTTGAATTCTGCAAAGGACTTGGTGACAGAATTAGGCCGGGAGCTAAGTAGCGAGAAGAAATTATGTGAGAAGCTTAAAGATCAAATCGAAAGTCTGGAAAATAGTCTGTCAAAGGCTGGCGAAGACAAAGAGGCACTAGAAACAAAGCTCAGAGAAAAGCTTGATTTGGTTGAAGGACTACAAGATCGGATCAACTTGCTTAGTTTGGAGCTGAAAGATAGTGAAGAAAAAGCTCAACGTTTTAATGCATCGTTGGCAAAAAAGGAAGCAGAATTGAAGGAACTCAACTCTATTTACACTCAAACTAGCCGAGATCTTGCTGAAGCGAAGTTAGAGATCAAACAGCAGAAGGAAGAACTCATAAGAACTCAGAGTGAATTGGACTCGAAGAACTCTGCGATTGAGGAGTTAAACACAAGAATAACAACTTTAGTGGCTGAGAAAGAGAGTTATATCCAGAAGCTTGATAGTATTTCAAAAGATTATAGTGCTTTGAAATTGACTTCTGAGACGCAAGCAGCTGCAGATGCAGAGCTCATCAGCAGGAAAGAGCAGGAGATTCAGCAGCTAAATGAAAATCTGGATCGTGCGCTAGATGATGTTAATAAAAGTAAAGACAAAGTTGCTGACTTAACTGAGAAGTACGAAGACTCGAAGAGAATGCTGGATATAGAACTGACTACAGTAAAAAATTTGAGACATGAACTTGAAGGAACAAAGAAAACACTGCAGGCATCTAGAGATCGGGTCTCTGACCTGGAAACGATGCTTGATGAGTCAAGAGCTTTGTGTTCAAAGTTAGAATCAGAGCTTGCTATAGTTCACGAAGAATGGAAGGAAGCTAAGGAAAGATATGAAAGGAACCTCGATGCTGAAAAACAAAAGAATGAGATTTCTGCTAGCGAACTTGCACTGGAGAAAGATCTTCGGAGGAGAGTTAAAGACGAGCTTGAGGGAGTAACTCATGAACTCAAAGAGTCTTCTGTCAAGAACCAGAGCCTCCAGAAGGAACTTGTGGAGATTTACAAGAAAGTTGAAACCAGTAACAAGGAATTGGAAGAGGAGAAAAAGACTGTTTTGTCGTTGAACAAAGAGGTGAAAGGAATGGAAAAGCAGATCTTGATGGAAAGGGAGGCGAGAAAATCCCTTGAAACAGATCTCGAAGAAGCTGTAAAGTCTTTAGATGAGATGAACAAGAACACATCAATACTGTCACGAGAGCTTGAGAAGGTGAATACCCATGCTTCAAACTTGGAGGACGAGAAAGAAGTACTTCAACGATCACTAGGAGAGGCAAAGAATGCATCAAAAGAAGCTAAGGAAAATGTGGAAGATGCACATATCCTCGTGATGAGTCTAGGAAAAGAAAGGGAAGTGCTAGAGAAGAAAGTGAAGAAGCTCGAGGAGGACTTGGGCTCTGCAAAGGGCGAGATACTGCGCATGAGGAGCCAACCGGATTCTGTAAAAGCTGTGAATAGTACAGACAACAAAGAGAAGAGCGACAACACGGTTACTGTGAAGAAAGTTGTCAGGAGGAGAAAGAGCAGTACCAGTTCTTGAAGAGAGAAGGTGATAATGACCAGAGCTTGCTTCTCTAATCATATAACGCAGATTATTTGTAGCCAATATTAAACCTTTGTGTAAATTTTGACAAGAGGCAAAATGGTTCTAGAGTTTCATCATTGAGATAATCCCAACAGTGATTATAGAAAGTATAAAATGAGAAGATAAATGCTTTGCATAGGCTATTTATATCCAAATTATGTATACATACCGAATTGTTAAAAGATGAAATTACATTTATTCTACAATTAAAACAGAAACTCCCTCAAGGAGTTTTCAG
CDS Sequence
- >AT3G16000.1
ATGGGTTTCCTGATAGGGGGCTCTTGCTTCGTCCCTTCTGTTCCTCTACACTCTCGATTCCTTTCATCTCCTTCTTCTTCTTCTTCTTCTTCTCCTTCTTCGTCTCAGTTTGGGCTTCTGTGTTCGAGTAATGTCGCCAAGTTCAAGCGCCGACGACCAACATTGGCTTCTTTAAACCAGGAAGATGGGTACGAGTATGACGTTGCTTCCGCCAAAAGGAGGGCTTTCCTTCTTGTGGGTATCTCTGTTCTTCCCTTTTTGCAGCTTCGATCACCCGCTTTGGCTGATGAAAGAGGCAATGAGATAAAGACATCGAAGGTTGATCTAGAAACTGAGGTTGCAGTAGTTAGTGAAGGAACATCCCCAAATCCATTTCTGGCTCTCCTGAATGGTCTTGGAATTTTTAGTGCTGGCGTTCTTGGTGCACTTTATGCACTGGCTCGGCAAGATACAAAAGCTGCTGAGGAAACCATCGAATCTCTAAAGAACCAGTTGAAAGACAGAGAAAGAGCATTGGTTTTGAAGGAGAAAGATTTCGAGGCAAAACTGCAGCATGAGCAGGAAGAGCGGAAAAAGGAAGTAGAAAAGGCAAAAGAGGAACAGTTGTCATTGATCAACCAGTTGAATTCTGCAAAGGACTTGGTGACAGAATTAGGCCGGGAGCTAAGTAGCGAGAAGAAATTATGTGAGAAGCTTAAAGATCAAATCGAAAGTCTGGAAAATAGTCTGTCAAAGGCTGGCGAAGACAAAGAGGCACTAGAAACAAAGCTCAGAGAAAAGCTTGATTTGGTTGAAGGACTACAAGATCGGATCAACTTGCTTAGTTTGGAGCTGAAAGATAGTGAAGAAAAAGCTCAACGTTTTAATGCATCGTTGGCAAAAAAGGAAGCAGAATTGAAGGAACTCAACTCTATTTACACTCAAACTAGCCGAGATCTTGCTGAAGCGAAGTTAGAGATCAAACAGCAGAAGGAAGAACTCATAAGAACTCAGAGTGAATTGGACTCGAAGAACTCTGCGATTGAGGAGTTAAACACAAGAATAACAACTTTAGTGGCTGAGAAAGAGAGTTATATCCAGAAGCTTGATAGTATTTCAAAAGATTATAGTGCTTTGAAATTGACTTCTGAGACGCAAGCAGCTGCAGATGCAGAGCTCATCAGCAGGAAAGAGCAGGAGATTCAGCAGCTAAATGAAAATCTGGATCGTGCGCTAGATGATGTTAATAAAAGTAAAGACAAAGTTGCTGACTTAACTGAGAAGTACGAAGACTCGAAGAGAATGCTGGATATAGAACTGACTACAGTAAAAAATTTGAGACATGAACTTGAAGGAACAAAGAAAACACTGCAGGCATCTAGAGATCGGGTCTCTGACCTGGAAACGATGCTTGATGAGTCAAGAGCTTTGTGTTCAAAGTTAGAATCAGAGCTTGCTATAGTTCACGAAGAATGGAAGGAAGCTAAGGAAAGATATGAAAGGAACCTCGATGCTGAAAAACAAAAGAATGAGATTTCTGCTAGCGAACTTGCACTGGAGAAAGATCTTCGGAGGAGAGTTAAAGACGAGCTTGAGGGAGTAACTCATGAACTCAAAGAGTCTTCTGTCAAGAACCAGAGCCTCCAGAAGGAACTTGTGGAGATTTACAAGAAAGTTGAAACCAGTAACAAGGAATTGGAAGAGGAGAAAAAGACTGTTTTGTCGTTGAACAAAGAGGTGAAAGGAATGGAAAAGCAGATCTTGATGGAAAGGGAGGCGAGAAAATCCCTTGAAACAGATCTCGAAGAAGCTGTAAAGTCTTTAGATGAGATGAACAAGAACACATCAATACTGTCACGAGAGCTTGAGAAGGTGAATACCCATGCTTCAAACTTGGAGGACGAGAAAGAAGTACTTCAACGATCACTAGGAGAGGCAAAGAATGCATCAAAAGAAGCTAAGGAAAATGTGGAAGATGCACATATCCTCGTGATGAGTCTAGGAAAAGAAAGGGAAGTGCTAGAGAAGAAAGTGAAGAAGCTCGAGGAGGACTTGGGCTCTGCAAAGGGCGAGATACTGCGCATGAGGAGCCAACCGGATTCTGTAAAAGCTGTGAATAGTACAGACAACAAAGAGAAGAGCGACAACACGGTTACTGTGAAGAAAGTTGTCAGGAGGAGAAAGAGCAGTACCAGTTCTTGA
Protein Sequence
- >AT3G16000.1
MGFLIGGSCFVPSVPLHSRFLSSPSSSSSSSPSSSQFGLLCSSNVAKFKRRRPTLASLNQEDGYEYDVASAKRRAFLLVGISVLPFLQLRSPALADERGNEIKTSKVDLETEVAVVSEGTSPNPFLALLNGLGIFSAGVLGALYALARQDTKAAEETIESLKNQLKDRERALVLKEKDFEAKLQHEQEERKKEVEKAKEEQLSLINQLNSAKDLVTELGRELSSEKKLCEKLKDQIESLENSLSKAGEDKEALETKLREKLDLVEGLQDRINLLSLELKDSEEKAQRFNASLAKKEAELKELNSIYTQTSRDLAEAKLEIKQQKEELIRTQSELDSKNSAIEELNTRITTLVAEKESYIQKLDSISKDYSALKLTSETQAAADAELISRKEQEIQQLNENLDRALDDVNKSKDKVADLTEKYEDSKRMLDIELTTVKNLRHELEGTKKTLQASRDRVSDLETMLDESRALCSKLESELAIVHEEWKEAKERYERNLDAEKQKNEISASELALEKDLRRRVKDELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSLNKEVKGMEKQILMEREARKSLETDLEEAVKSLDEMNKNTSILSRELEKVNTHASNLEDEKEVLQRSLGEAKNASKEAKENVEDAHILVMSLGKEREVLEKKVKKLEEDLGSAKGEILRMRSQPDSVKAVNSTDNKEKSDNTVTVKKVVRRRKSSTSS