Information report for AT3G15850
Gene Details
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Functional Descriptions
- GO:0010205 — acts upstream of or within — photoinhibition
- GO:0102657 — enables — 1-18:1-2-16:0-monogalactosyldiacylglycerol palmitoyl-lipid 7-desaturase activity
- GO:0006636 — acts upstream of or within — unsaturated fatty acid biosynthetic process
- GO:0005789 — is active in — endoplasmic reticulum membrane
- GO:0009979 — enables — 16:0 monogalactosyldiacylglycerol desaturase activity
- GO:0102843 — enables — 1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity (SN2-16:1 forming)
- GO:0006636 — involved in — unsaturated fatty acid biosynthetic process
- GO:0009579 — located in — thylakoid
- GO:0031408 — involved in — oxylipin biosynthetic process
- GO:0009507 — located in — chloroplast
- CS206 — altered fatty acid metabolism, no other phenotypic effect.
- CS23879 — Leaves lack any detectable amounts of the unsaturated 16-carbon fatty acids, 16:1 delta 7, 16:2 and 16:3 fatty acid methylesters. The mutant leaves also have increased levels of 16:0 fatty acid methylesters. This phenotype is the fad5-2 mutation based upon similarity to the fad5-1 phenotype in the literature.
- fad5-3 — fad5-3 single mutant similar to other fad5 alleles. Altered fatty acid metabolism.
- fad5-3/crl — The suppressor of crl 4, spcrl4 (crl/fad5-3) shows pale leaves with improved morphology alongwith abrogation of cell deatrh phenotype of crumpled leaf mutnat (crl). Loss of CRL leads to altered leaf morphology, pale leaves, small stature and localized cell death. The FAD5 deficiency in crl, abrogates the cell death and improves leaf morphology and plant stature but have more paler leaves.
Functional Keywords
Literature and News
- The impact of alteration of polyunsaturated fatty acid levels on C6-aldehyde formation of Arabidopsis thaliana leaves. DOI: 10.1104/pp.111.3.805 ; PMID: 8754681
- Photoinhibition in mutants of Arabidopsis deficient in thylakoid unsaturation. DOI: 10.1104/pp.004341 ; PMID: 12068126
- Switching desaturase enzyme specificity by alternate subcellular targeting. DOI: 10.1073/pnas.0402200101 ; PMID: 15240892
- Role of salicylic acid and fatty acid desaturation pathways in ssi2-mediated signaling. DOI: 10.1104/pp.105.071662 ; PMID: 16306139
- A suppressor of fab1 challenges hypotheses on the role of thylakoid unsaturation in photosynthetic function. DOI: 10.1104/pp.106.080481 ; PMID: 16698898
- Altered rates of protein transport in Arabidopsis mutants deficient in chloroplast membrane unsaturation. DOI: 10.1016/j.phytochem.2006.04.008 ; PMID: 16759675
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Multidisciplinary approach to unravelling the relative contribution of different oxylipins in indirect defense of Arabidopsis thaliana. DOI: 10.1007/s10886-009-9696-3 ; PMID: 19798534
- Involvement of Arabidopsis ACYL-COENZYME A DESATURASE-LIKE2 (At2g31360) in the biosynthesis of the very-long-chain monounsaturated fatty acid components of membrane lipids. DOI: 10.1104/pp.112.202325 ; PMID: 23175755
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- ACYL-LIPID DESATURASE2 is required for chilling and freezing tolerance in Arabidopsis. DOI: 10.1105/tpc.113.111179 ; PMID: 23585650
- A mutant of the Arabidopsis thaliana TOC159 gene accumulates reduced levels of linolenic acid and monogalactosyldiacylglycerol. DOI: 10.1016/j.plaphy.2013.10.018 ; PMID: 24184455
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The toc132toc120 heterozygote mutant of Arabidopsis thaliana accumulates reduced levels of hexadecatrienoic acid. DOI: 10.1016/j.plaphy.2015.09.006 ; PMID: 26381195
- FATTY ACID DESATURASE5 Is Required to Induce Autoimmune Responses in Gigantic Chloroplast Mutants of Arabidopsis. DOI: 10.1105/tpc.20.00016 ; PMID: 32796124
- Ozone-induced lipid changes in the wildtype and toc132toc120 heterozygote mutant of Arabidopsis thaliana. DOI: 10.1016/j.plaphy.2020.11.050 ; PMID: 33291051
- Fatty Acid Desaturases in the Chloroplast and Endoplasmic Reticulum Promote Susceptibility to the Green Peach Aphid Myzus persicae in Arabidopsis thaliana. DOI: 10.1094/MPMI-12-20-0345-R ; PMID: 33596108
Gene Resources
- UniProt: A0A178VBZ6
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VBZ6
- EnsemblPlants: AT3G15850.1
- Gramene: AT3G15850.1
- KEGG: ath:AT3G15850
- Orthologous matrix: SCGESWH
- ExpressionAtlas: AT3G15850
- InterPro: IPR005804, IPR015876
- PANTHER: PTHR11351, PTHR11351:SF31
- OrthoDB: A0A178VBZ6
- SWISS-MODEL: A0A178VBZ6
- Conserved Domain Database: cd03505
Sequences
cDNA Sequence
- >AT3G15850.1
AAATGTAAGGTCTATGGAACATGTCCCTTTCACTCTTGGGATTTTTCCTTTAATGAATAAGAAAGAATGGGCTCAAAACCAAAATAAGCCCATTCAAGAGATCAATGAGCCCAATTGTTTGAAAGCAAATATTGGGGTGATTTGTTAACTTTCCAAGAAAAACACGGGCTTTTCAGCAAAACAACTCGAAAAATTGAAGAGAAGATCCGGGTTTTAGATAACTGCCCCAAATTGGCAATCCAAATCCCTAAAACCATCTTATCCTCTCTTTCCAAATCTAGCCGCAATGTAGTCCCGTGAACCACAAAAAAGATGAGATCTTGCACGTCTCTGTCATCACAACTAGTACTACTAATTGTGAAGCATACAAAAAAGACCGACCCTTATTTATACACGCACACATATTAACATATTTATACTACTAGTATATAAGTTAAGGGTTTAAGCCTCTTCTCTTCCTTCTTTCTCTTAGCCATCACATCGATAATGGCTTCTCTTCTAACAAAACCCAAACCCGTTTTCCTCTGTTCACCATCGTTATCTCCAAGAACTTTGAACACAGCAACACCGTCATTGAATTTCACCAGAATTTCATTCACCCATCACCAAAAGCTTGCTCCTTTCAAGCCTCCTAGTCTCGTTGTTGCATTCTCTGAAAAGGGTTTGAAGAGAGATGTCACCACAGCTGCTGCAGCGACGGAGGGAGATTACAGAAGGATAATGTTATCTGATGTGTTGGTGAAGAAGAAGGAAAAAGTAGTTTGGTGGGAGAGAGAATGGAAAGCTATGGACTTTGGAGCTGTTGCTGTCGTTTTGTCTATGCATTTGCTTAGTCTTTTGGCTCCGTTTCAATTCAATTGGAGAGCTGTTTCGGTTGCTTTTGGGCTTTATATCGTTACAGGTCTTCTGGGGATTACTCTGTCTTTCCATAGGAATCTTTCTCATAAAGCCTTCAAGCTACCTAAATGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAAGCTCTTCAGGGAAACCCAATTGATTGGGTGAGTACACATAGGTACCATCATCAGTTTTGTGATTCAGACAGAGACCCTCATAGCCCACTTGATGGGTTTTGGTTCAGTCACATGAATTGGATGTTTGATACCAATACAATCACCCAAAGGTGTGGAGAGCCTAATAATGTTGGGGACTTGGAGAAGCAGCCATTCTATCGATTCCTTCGAACCACCTACATTTTGCATCCGCTGGCTCTAGCGGTTGCTTTATACGCAATGGGTGGCTTTCCATTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATATCATATAACTTGGCTAGTGAACTCAGCTTGTCATGTATGGGGAAAACAAGCATGGAACACAGGCGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTAGCATTCGGGGAAGGATGGCACAACAATCACCATGCTTTTGAGTTCTCAGCTCGACACGGCTTAGAATGGTGGCAACTTGATATGACTTGGTACGTCGTTAAGTTCCTTCAAGCCATCGGTTTAGCAACTGATGTCAAGCTCCCATCGGAAGCTCAGAAACAAAGAATGGCATTCACCAGCGACTGATCTTAAAAAACTACATGGTTATGCCTAAAGTCAAAACTGTCGGTTCGATTGAAGCTATGAAGGTTTTAAAAAAGGATTTTGTTCTGCTTTTTTGTGTTTACTTAAAGGTATATATCTGTGCAAGAGATTGTATGTGACAAACTGATTATGAATAATATCTATAATTACATTCAATACAAAAGGAAGC
CDS Sequence
- >AT3G15850.1
ATGGCTTCTCTTCTAACAAAACCCAAACCCGTTTTCCTCTGTTCACCATCGTTATCTCCAAGAACTTTGAACACAGCAACACCGTCATTGAATTTCACCAGAATTTCATTCACCCATCACCAAAAGCTTGCTCCTTTCAAGCCTCCTAGTCTCGTTGTTGCATTCTCTGAAAAGGGTTTGAAGAGAGATGTCACCACAGCTGCTGCAGCGACGGAGGGAGATTACAGAAGGATAATGTTATCTGATGTGTTGGTGAAGAAGAAGGAAAAAGTAGTTTGGTGGGAGAGAGAATGGAAAGCTATGGACTTTGGAGCTGTTGCTGTCGTTTTGTCTATGCATTTGCTTAGTCTTTTGGCTCCGTTTCAATTCAATTGGAGAGCTGTTTCGGTTGCTTTTGGGCTTTATATCGTTACAGGTCTTCTGGGGATTACTCTGTCTTTCCATAGGAATCTTTCTCATAAAGCCTTCAAGCTACCTAAATGGCTTGAGTACTTGTTTGCTTATTGTGGAGCTCAAGCTCTTCAGGGAAACCCAATTGATTGGGTGAGTACACATAGGTACCATCATCAGTTTTGTGATTCAGACAGAGACCCTCATAGCCCACTTGATGGGTTTTGGTTCAGTCACATGAATTGGATGTTTGATACCAATACAATCACCCAAAGGTGTGGAGAGCCTAATAATGTTGGGGACTTGGAGAAGCAGCCATTCTATCGATTCCTTCGAACCACCTACATTTTGCATCCGCTGGCTCTAGCGGTTGCTTTATACGCAATGGGTGGCTTTCCATTCATCGTTTGGGGAATGGGTGTAAGAATAGTATGGGTATATCATATAACTTGGCTAGTGAACTCAGCTTGTCATGTATGGGGAAAACAAGCATGGAACACAGGCGATTTGTCTAAGAACAACTGGTGGGTAGCAGCTCTAGCATTCGGGGAAGGATGGCACAACAATCACCATGCTTTTGAGTTCTCAGCTCGACACGGCTTAGAATGGTGGCAACTTGATATGACTTGGTACGTCGTTAAGTTCCTTCAAGCCATCGGTTTAGCAACTGATGTCAAGCTCCCATCGGAAGCTCAGAAACAAAGAATGGCATTCACCAGCGACTGA
Protein Sequence
- >AT3G15850.1
MASLLTKPKPVFLCSPSLSPRTLNTATPSLNFTRISFTHHQKLAPFKPPSLVVAFSEKGLKRDVTTAAAATEGDYRRIMLSDVLVKKKEKVVWWEREWKAMDFGAVAVVLSMHLLSLLAPFQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTNTITQRCGEPNNVGDLEKQPFYRFLRTTYILHPLALAVALYAMGGFPFIVWGMGVRIVWVYHITWLVNSACHVWGKQAWNTGDLSKNNWWVAALAFGEGWHNNHHAFEFSARHGLEWWQLDMTWYVVKFLQAIGLATDVKLPSEAQKQRMAFTSD