Information report for AT3G15790
Gene Details
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Functional Descriptions
- GO:0046394 — acts upstream of or within — carboxylic acid biosynthetic process
- GO:0008327 — enables — methyl-CpG binding
- GO:1901566 — acts upstream of or within — organonitrogen compound biosynthetic process
- GO:0009812 — acts upstream of or within — flavonoid metabolic process
- GO:0019760 — acts upstream of or within — glucosinolate metabolic process
- GO:0009611 — acts upstream of or within — response to wounding
- GO:0005634 — located in — nucleus
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0071396 — acts upstream of or within — cellular response to lipid
- GO:0044085 — acts upstream of or within — cellular component biogenesis
- GO:0009753 — acts upstream of or within — response to jasmonic acid
- GO:0009790 — acts upstream of or within — embryo development
- GO:1901701 — acts upstream of or within — cellular response to oxygen-containing compound
- GO:0007049 — acts upstream of or within — cell cycle
- GO:0033993 — acts upstream of or within — response to lipid
- GO:0019748 — acts upstream of or within — secondary metabolic process
Functional Keywords
Literature and News
- Characterization of Arabidopsis thaliana methyl-CpG-binding domain (MBD) proteins. DOI: 10.1046/j.1365-313x.2003.01756.x ; PMID: 12787239
- Ten members of the Arabidopsis gene family encoding methyl-CpG-binding domain proteins are transcriptionally active and at least one, AtMBD11, is crucial for normal development. DOI: 10.1093/nar/gkg735 ; PMID: 12954765
- Evolutionary divergence of monocot and dicot methyl-CpG-binding domain proteins. DOI: 10.1104/pp.105.060566 ; PMID: 15888682
- Methyl-CpG-binding domain proteins in plants: interpreters of DNA methylation. DOI: 10.1016/j.tplants.2006.12.004 ; PMID: 17208509
- Differentiation of Arabidopsis guard cells: analysis of the networks incorporating the basic helix-loop-helix transcription factor, FAMA. DOI: 10.1104/pp.110.167718 ; PMID: 21245191
- Characterization of Arabidopsis thaliana methyl-CpG-binding domain (MBD) proteins. DOI: 10.1046/j.1365-313x.2003.01756.x ; PMID: 12787239
Gene Resources
- UniProt: A0A178VFI4
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VFI4
- EnsemblPlants: AT3G15790.1, AT3G15790.2, AT3G15790.3
- Gramene: AT3G15790.1, AT3G15790.2, AT3G15790.3
- KEGG: ath:AT3G15790
- Orthologous matrix: HVKDTEM
- ExpressionAtlas: AT3G15790
- InterPro: IPR001739, IPR016177, IPR039622
- PANTHER: PTHR33729, PTHR33729:SF6
- SUPFAM: SSF54171
- PROSITE: PS50982
- Gene3D: 3.30.890.10
- OrthoDB: A0A178VFI4
- SWISS-MODEL: A0A178VFI4
Homologs
- Oryza sativa OsMBD707
Sequences
cDNA Sequence
- >AT3G15790.2
CGAACATCCGAGTCGACTTAACACCTTTTGATCAAGGCTTTAACGTGTCGTTGTTACCATAGAATATAGATGATAGAGCGCATTTTATATCACTGGATATAGACACGTGGTTAAACTTAATTGGGTTGTTAGTTAAGTTGTTGTGCTACCTCCAAGTGACTTTATCATATACTCTGTGTGTTTCTGGTAGTAAAAAAAGGTCTAAAACCATAGTGTTAAGCAAAAGAGAAAAAGAAGAGCAGAGCAAAATCCCTAAAATTTTAAACTCTGTTTTGCTTTCCGACAATCAAACCCTAGGGGTTGCTAAAGGGAAAGGAGAGAGATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAGCCCTGTTCTGCTCTGCTTCTGTTAGCTCATGAAACTGTAAGTCAGTTGTTTCTATCAATCTATTGAAGTATATGGTTTCCTTTTTGCTTCCTACTCGGAGCATTATCGCGGTGAAAGGTGTTGTTAGGCTGAGATATGTATTATGAGATATGTGCAAGTTCTGTTTGGTTGTAAGGTTATGTAGAGGATATATTATTGACTCTTCTCTAAAACCATTGCAATCACTAGGTTTGATGTTTTATCTTTCTGCTACAATCTTTAGTCATTTTCGTATGGATGGACAATCAAGTTATGAACAAGTCAGATTAAAGATCCACACATAGATTAAT - >AT3G15790.3
CGAACATCCGAGTCGACTTAACACCTTTTGATCAAGGCTTTAACGTGTCGTTGTTACCATAGAATATAGATGATAGAGCGCATTTTATATCACTGGATATAGACACGTGGTTAAACTTAATTGGGTTGTTAGTTAAGTTGTTGTGCTACCTCCAAGTGACTTTATCATATACTCTGTGTGTTTCTGGTAGTAAAAAAAGGTCTAAAACCATAGTGTTAAGCAAAAGAGAAAAAGAAGAGCAGAGCAAAATCCCTAAAATTTTAAACTCTGTTTTGCTTTCCGACAATCAAACCCTAGGGGTTGCTAAAGGGAAAGGAGAGAGATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAGCCCTGTTCTGCTCTGCTTCTGTTAGCTCATGAAACTGTAAGTCAGTTGTTTCTATCAATCTATTGAAGTATATGGTTTCCTTTTTGCTTCCTACTCGGAGCATTATCGCGGTGAAAGGTGTTGTTAGGCTGAGATATGTATTATGAGATATGTGCAAGTTCTGTTTGGTTGTAAGGTTATGTAGAGGATATATTATTGACTCTTCTCTAAAACCATTGCAATCACTAGGTTTGATGTTTTATCTTTCTGCTACAATCTTTAGTCATTTTCGTATGGATGGACAATCAAGTTATGAACAAGTCAGATTAAAGATCCACACATAGATTAAT - >AT3G15790.1
CGAACATCCGAGTCGACTTAACACCTTTTGATCAAGGCTTTAACGTGTCGTTGTTACCATAGAATATAGATGATAGAGCGCATTTTATATCACTGGATATAGACACGTGGTTAAACTTAATTGGGTTGTTAGTTAAGTTGTTGTGCTACCTCCAAGTGACTTTATCATATACTCTGTGTGTTTCTGGTAGTAAAAAAAGGTCTAAAACCATAGTGTTAAGCAAAAGAGAAAAAGAAGAGCAGAGCAAAATCCCTAAAATTTTAAACTCTGTTTTGCTTTCCGACAATCAAACCCTAGGGGTTGCTAAAGGGAAAGGAGAGAGATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAGCCCTGTTCTGCTCTGCTTCTGTTAGCTCATGAAACTGTAAGTCAGTTGTTTCTATCAATCTATTGAAGTATATGGTTTCCTTTTTGCTTCCTACTCGGAGCATTATCGCGGTGAAAGGTGTTGTTAGGCTGAGATATGTATTATGAGATATGTGCAAGTTCTGTTTGGTTGTAAGGTTATGTAGAGGATATATTATTGACTCTTCTCTAAAACCATTGCAATCACTAGGTTTGATGTTTTATCTTTCTGCTACAATCTTTAGTCATTTTCGTATGGATGGACAATCAAGTTATGAACAAGTCAGATTAAAGATCCACACATAGATTAAT
CDS Sequence
- >AT3G15790.2
ATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAG - >AT3G15790.3
ATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAG - >AT3G15790.1
ATGGGTGGTGAAGAGGAAGTTGTTTCTGTTGAGCTACCAGCACCTTCTTCATGGAAGAAATTGTTTTACCCCAACAAAGTGGGTTCAGTGAAGAAAACAGAGGTTGTGTTTGTGGCTCCAACGGGTGAGGAGATTAGTAACAGAAAGCAGCTGGAGCAGTATCTCAAATCGCACCCTGGAAACCCCGCGATCGCAGAGTTTGATTGGACGACTAGTGGGACACCTAGGAGATCTGCAAGAATCAGTGAGAAGACTAAGGCTACGCCGTCACCAGATAAAGAGCCACCCAAGAAGCGAGGTAGAACCAAATCTCCAGTGTCAAAGAAAGATGCAGAAGGTGAGAAATCAGAGGGAGGAGGAGAGGAAAACTCTCATGTGAAAGATACTGAAATGAATCCTCCAGAGGGAATCGCCGAGAATGAAAATGTGACCGATAAGAATGGCTCCGGTGAAACTGAGAGGGTGAATGATGCAAAAGAAAACATTGTTGCTGAGGAAACTCCAAATGCGGCTCCAGTTCAAGAAGAGGGTGAGTCGATGAAGGAGAAAGCTCTGGATTCTGTTGATGATAAGAGTAAGGAGACTGACAAAGAAAAAGATACTGGCTCAATCGAAAAGAACTCGGTAGATGTAGAGAAGAAGACCGTTGAAGCTAGTGATGAGAAGAAGAATTCTGAAGCTGAGACCAGAAACCATGAAGAAAATGGTCTGACCACAGAAGCTGAGGGGAAAGAGAAAACAGCAGAAGGAGAAGCTACCGGATAG
Protein Sequence
- >AT3G15790.2
MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGEATG - >AT3G15790.3
MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGEATG - >AT3G15790.1
MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGEATG