Information report for AT3G15620
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0071949 — enables — FAD binding
- GO:0003914 — enables — DNA (6-4) photolyase activity
- GO:0009507 — located in — chloroplast
- GO:0003677 — enables — DNA binding
- GO:0043153 — involved in — entrainment of circadian clock by photoperiod
- GO:0009411 — acts upstream of or within — response to UV
- GO:0032922 — involved in — circadian regulation of gene expression
- GO:0005737 — is active in — cytoplasm
- GO:0003904 — enables — deoxyribodipyrimidine photo-lyase activity
- GO:0005634 — is active in — nucleus
- uvr3 — Defective in photorepair of 6-4 photoproducts
Functional Keywords
Literature and News
- Photorepair mutants of Arabidopsis. DOI: 10.1073/pnas.94.14.7441 ; PMID: 9750104
- Ultraviolet B radiation enhances a phytochrome-B-mediated photomorphogenic response in Arabidopsis. DOI: 10.1104/pp.126.2.780 ; PMID: 11402206
- CENTRIN2 modulates homologous recombination and nucleotide excision repair in Arabidopsis. DOI: 10.1105/tpc.021378 ; PMID: 15155891
- Genome-wide identification of potential plant E2F target genes. DOI: 10.1104/pp.105.066290 ; PMID: 16126853
- CONSTITUTIVELY PHOTOMORPHOGENIC1 is required for the UV-B response in Arabidopsis. DOI: 10.1105/tpc.105.040097 ; PMID: 16829591
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Light-induced activation of class II cyclobutane pyrimidine dimer photolyases. DOI: 10.1016/j.dnarep.2010.01.014 ; PMID: 20227927
- det1-1-induced UV-C hyposensitivity through UVR3 and PHR1 photolyase gene over-expression. DOI: 10.1111/j.1365-313X.2010.04249.x ; PMID: 20487384
Gene Resources
Homologs
- Brassica napus BnaA10G0025800ZS, BnaA08G0315300ZS
- Brassica oleracea Bo5g004560, Bo8g002920
- Brassica rapa Bra015313, Bra030568
- Daucus carota DCAR_024248
- Glycine max Glyma.10G180600, GmCRY2a, Glyma.20G209900
- Juglans regia Jr12_14580
- Medicago truncatula Medtr1g043190, Medtr1g076190
- Musa acuminata Ma05_g20910
- Oryza sativa LOC_Os02g41550, OsCRY2;CRY2
- Populus trichocarpa POPTR_010G071200v3
- Sesamum indicum SIN_1002863
- Vitis vinifera VIT_05s0049g00960
Sequences
cDNA Sequence
- >AT3G15620.1
GGATACTAATAAGCACTAAATGTTGGATAATTGAACACATCGCCCAAATGATGTTGCTCCTTAGTAATGACGTGGCCTAAATATAACCGTTGATAATAACCTATTCCCTTCTTTTATCTTACGCTGATTACCGCGCAAATTAGCAAACACAGAGTTGAAGAAGCGTATATTAACCACATCTTCGTCTTAAGAAACCTTCTCTCGCGCTTTTCAAAGGCGCGAATTTCTCAAAAGAAACTTCTATAGAAATCTCAAACATATTCATGCAACGATTCTGCGTCTGTTCACCTTCAAGTTATCGTCTCAATCCCATAACATCAATGGCTACTGGATCCGGTTCACTGATTTGGTTCCGGAAAGGTCTCCGGGTTCACGACAACCCGGCTCTTGAATACGCCTCAAAAGGTTCTGAATTTATGTATCCGGTTTTTGTTATCGACCCGCATTATATGGAGTCAGACCCATCTGCGTTCTCTCCCGGTTCGTCTCGCGCCGGGGTAAACCGGATCCGGTTCTTGCTTGAGAGTCTCAAGGATCTCGATTCTAGCCTGAAGAAACTTGGTTCACGGTTGCTTGTTTTTAAAGGTGAACCTGGCGAAGTACTAGTTCGTTGCTTGCAAGAGTGGAAGGTGAAGAGGCTTTGCTTTGAATATGATACAGATCCGTATTATCAAGCTTTAGATGTTAAGGTTAAGGATTATGCTTCTTCAACTGGAGTTGAGGTTTTCTCTCCAGTGAGCCATACTCTGTTCAATCCCGCACACATTATAGAGAAAAACGGTGGGAAGCCACCTTTGAGTTATCAATCATTTCTGAAGGTTGCTGGGGAGCCCTCATGTGCTAAATCTGAACTTGTGATGTCTTATTCTTCACTTCCTCCAATTGGAGATATTGGAAACCTTGGCATTTCAGAAGTACCATCTCTTGAGGAACTTGGCTACAAAGATGATGAACAAGCTGATTGGACTCCTTTTAGAGGTGGTGAATCAGAAGCCTTAAAAAGATTGACTAAATCAATCAGTGATAAGGCATGGGTGGCAAACTTTGAGAAACCAAAGGGTGATCCATCTGCTTTCTTGAAGCCTGCTACTACAGTTATGTCACCATATTTGAAATTCGGATGCCTTTCTTCGAGGTACTTTTATCAATGCCTTCAAAATATTTATAAGGATGTTAAAAAGCATACATCGCCGCCAGTTTCTCTCCTGGGGCAGTTGTTGTGGCGAGAATTTTTCTATACCACTGCATTTGGAACTCCTAACTTTGACAAAATGAAGGGAAACCGGATCTGCAAACAGATTCCATGGAACGAGGATCATGCTATGTTGGCTGCTTGGAGGGACGGTAAGACAGGATACCCTTGGATTGATGCCATCATGGTTCAGCTTCTGAAATGGGGTTGGATGCACCATCTAGCGCGTCACTGTGTAGCCTGTTTTCTTACTCGTGGGGATCTGTTCATACATTGGGAACAAGGGCGTGATGTGTTTGAGAGACTTCTGATCGATTCAGACTGGGCAATCAACAATGGAAATTGGATGTGGTTATCATGTTCGTCGTTCTTTTACCAGTTCAACCGCATCTACTCTCCTATATCTTTCGGAAAGAAGTATGATCCTGATGGGAAGTACATTAGGCATTTTCTACCGGTACTGAAAGATATGCCAAAGCAATATATATATGAGCCATGGACAGCACCATTGAGCGTTCAAACTAAAGCAAACTGCATAGTCGGGAAGGACTACCCAAAGCCAATGGTATTGCACGATTCAGCAAGCAAGGAGTGCAAGAGGAAGATGGGTGAAGCATATGCATTGAACAAGAAGATGGATGGTAAAGTAGATGAAGAAAATTTGAGGGATTTGAGGAGAAAGCTTCAGAAAGATGAACATGAAGAGTCCAAAATCAGGAACCAACGACCAAAACTCAAATAGGTAGAGGATTAAAAACCTTTTCTGAAATTGATGAAGTGTGTATTGTTACAATAATTCTAGCTGGTATGACTTAATCATGGTTACATTTCTATTTCTATGTAAAAAAATCTGTTATGCATCAATGTGTCATGTAACACTTCTCTTGAGGCAAATATAAATTATTTGAATTTTTGGACAGAG - >AT3G15620.2
GGATACTAATAAGCACTAAATGTTGGATAATTGAACACATCGCCCAAATGATGTTGCTCCTTAGTAATGACGTGGCCTAAATATAACCGTTGATAATAACCTATTCCCTTCTTTTATCTTACGCTGATTACCGCGCAAATTAGCAAACACAGAGTTGAAGAAGCGTATATTAACCACATCTTCGTCTTAAGAAACCTTCTCTCGCGCTTTTCAAAGGCGCGAATTTCTCAAAAGAAACTTCTATAGAAATCTCAAACATATTCATGCAACGATTCTGCGTCTGTTCACCTTCAAGTTATCGTCTCAATCCCATAACATCAATGGCTACTGGATCCGGTTCACTGATTTGGTTCCGGAAAGGTCTCCGGGTTCACGACAACCCGGCTCTTGAATACGCCTCAAAAGGTTCTGAATTTATGTATCCGGTTTTTGTTATCGACCCGCATTATATGGAGTCAGACCCATCTGCGTTCTCTCCCGGTTCGTCTCGCGCCGGGGTAAACCGGATCCGGTTCTTGCTTGAGAGTCTCAAGGATCTCGATTCTAGCCTGAAGAAACTTGGTTCACGGTTGCTTGTTTTTAAAGGTGAACCTGGCGAAGTACTAGTTCGTTGCTTGCAAGAGTGGAAGGTGAAGAGGCTTTGCTTTGAATATGATACAGATCCGTATTATCAAGCTTTAGATGTTAAGGTTAAGGATTATGCTTCTTCAACTGGAGTTGAGGTTTTCTCTCCAGTGAGCCATACTCTGTTCAATCCCGCACACATTATAGAGAAAAACGGTGGGAAGCCACCTTTGAGTTATCAATCATTTCTGAAGGTTGCTGGGGAGCCCTCATGTGCTAAATCTGAACTTGTGATGTCTTATTCTTCACTTCCTCCAATTGGAGATATTGGAAACCTTGGCATTTCAGAAGTACCATCTCTTGAGGAACTTGGCTACAAAGATGATGAACAAGCTGATTGGACTCCTTTTAGAGGTGGTGAATCAGAAGCCTTAAAAAGATTGACTAAATCAATCAGTGATAAGGCATGGGTGGCAAACTTTGAGAAACCAAAGGGTGATCCATCTGCTTTCTTGAAGCCTGCTACTACAGTTATGTCACCATATTTGAAATTCGGATGCCTTTCTTCGAGGTACTTTTATCAATGCCTTCAAAATATTTATAAGGATGTTAAAAAGCATACATCGCCGCCAGTTTCTCTCCTGGGGCAGTTGTTGTGGCGAGAATTTTTCTATACCACTGCATTTGGAACTCCTAACTTTGACAAAATGAAGGGAAACCGGATCTGCAAACAGATTCCATGGAACGAGGATCATGCTATGTTGGCTGCTTGGAGGGACGGTAAGACAGGATACCCTTGGATTGATGCCATCATGGTTCAGCTTCTGAAATGGGGTTGGATGCACCATCTAGCGCGTCACTGTGTAGCCTGTTTTCTTACTCGTGGGGATCTGTTCATACATTGGGAACAAGGGCGTGATGTGTTTGAGAGACTTCTGATCGATTCAGACTGGGCAATCAACAATGGAAATTGGATGTGGTTATCATGTTCGTCGTTCTTTTACCAGTTCAACCGCATCTACTCTCCTATATCTTTCGGAAAGAAGTATGATCCTGATGGGAAGTACATTAGGCATTTTCTACCGGTACTGAAAGATATGCCAAAGCAATATATATATGAGCCATGGACAGCACCATTGAGCGTTCAAACTAAAGCAAACTGCATAGTCGGGAAGGACTACCCAAAGCCAATGGTATTGCACGATTCAGCAAGCAAGGAGTGCAAGAGGAAGATGGGTGAAGCATATGCATTGAACAAGAAGATGGATGGTAAAGTAGATGAAGAAAATTTGAGGGATTTGAGGAGAAAGCTTCAGAAAGATGAACATGAAGAGTCCAAAATCAGGAACCAACGACCAAAACTCAAATAGGTAGAGGATTAAAAACCTTTTCTGAAATTGATGAAGTGTGTATTGTTACAATAATTCTAGCTGGTATGACTTAATCATGGTTACATTTCTATTTCTATGTAAAAAAATCTGTTATGCATCAATGTGTCATGTAACACTTCTCTTGAGGCAAATATAAATTATTTGAATTTTTGGACAGAG
CDS Sequence
- >AT3G15620.1
ATGCAACGATTCTGCGTCTGTTCACCTTCAAGTTATCGTCTCAATCCCATAACATCAATGGCTACTGGATCCGGTTCACTGATTTGGTTCCGGAAAGGTCTCCGGGTTCACGACAACCCGGCTCTTGAATACGCCTCAAAAGGTTCTGAATTTATGTATCCGGTTTTTGTTATCGACCCGCATTATATGGAGTCAGACCCATCTGCGTTCTCTCCCGGTTCGTCTCGCGCCGGGGTAAACCGGATCCGGTTCTTGCTTGAGAGTCTCAAGGATCTCGATTCTAGCCTGAAGAAACTTGGTTCACGGTTGCTTGTTTTTAAAGGTGAACCTGGCGAAGTACTAGTTCGTTGCTTGCAAGAGTGGAAGGTGAAGAGGCTTTGCTTTGAATATGATACAGATCCGTATTATCAAGCTTTAGATGTTAAGGTTAAGGATTATGCTTCTTCAACTGGAGTTGAGGTTTTCTCTCCAGTGAGCCATACTCTGTTCAATCCCGCACACATTATAGAGAAAAACGGTGGGAAGCCACCTTTGAGTTATCAATCATTTCTGAAGGTTGCTGGGGAGCCCTCATGTGCTAAATCTGAACTTGTGATGTCTTATTCTTCACTTCCTCCAATTGGAGATATTGGAAACCTTGGCATTTCAGAAGTACCATCTCTTGAGGAACTTGGCTACAAAGATGATGAACAAGCTGATTGGACTCCTTTTAGAGGTGGTGAATCAGAAGCCTTAAAAAGATTGACTAAATCAATCAGTGATAAGGCATGGGTGGCAAACTTTGAGAAACCAAAGGGTGATCCATCTGCTTTCTTGAAGCCTGCTACTACAGTTATGTCACCATATTTGAAATTCGGATGCCTTTCTTCGAGGTACTTTTATCAATGCCTTCAAAATATTTATAAGGATGTTAAAAAGCATACATCGCCGCCAGTTTCTCTCCTGGGGCAGTTGTTGTGGCGAGAATTTTTCTATACCACTGCATTTGGAACTCCTAACTTTGACAAAATGAAGGGAAACCGGATCTGCAAACAGATTCCATGGAACGAGGATCATGCTATGTTGGCTGCTTGGAGGGACGGTAAGACAGGATACCCTTGGATTGATGCCATCATGGTTCAGCTTCTGAAATGGGGTTGGATGCACCATCTAGCGCGTCACTGTGTAGCCTGTTTTCTTACTCGTGGGGATCTGTTCATACATTGGGAACAAGGGCGTGATGTGTTTGAGAGACTTCTGATCGATTCAGACTGGGCAATCAACAATGGAAATTGGATGTGGTTATCATGTTCGTCGTTCTTTTACCAGTTCAACCGCATCTACTCTCCTATATCTTTCGGAAAGAAGTATGATCCTGATGGGAAGTACATTAGGCATTTTCTACCGGTACTGAAAGATATGCCAAAGCAATATATATATGAGCCATGGACAGCACCATTGAGCGTTCAAACTAAAGCAAACTGCATAGTCGGGAAGGACTACCCAAAGCCAATGGTATTGCACGATTCAGCAAGCAAGGAGTGCAAGAGGAAGATGGGTGAAGCATATGCATTGAACAAGAAGATGGATGGTAAAGTAGATGAAGAAAATTTGAGGGATTTGAGGAGAAAGCTTCAGAAAGATGAACATGAAGAGTCCAAAATCAGGAACCAACGACCAAAACTCAAATAG - >AT3G15620.2
ATGCAACGATTCTGCGTCTGTTCACCTTCAAGTTATCGTCTCAATCCCATAACATCAATGGCTACTGGATCCGGTTCACTGATTTGGTTCCGGAAAGGTCTCCGGGTTCACGACAACCCGGCTCTTGAATACGCCTCAAAAGGTTCTGAATTTATGTATCCGGTTTTTGTTATCGACCCGCATTATATGGAGTCAGACCCATCTGCGTTCTCTCCCGGTTCGTCTCGCGCCGGGGTAAACCGGATCCGGTTCTTGCTTGAGAGTCTCAAGGATCTCGATTCTAGCCTGAAGAAACTTGGTTCACGGTTGCTTGTTTTTAAAGGTGAACCTGGCGAAGTACTAGTTCGTTGCTTGCAAGAGTGGAAGGTGAAGAGGCTTTGCTTTGAATATGATACAGATCCGTATTATCAAGCTTTAGATGTTAAGGTTAAGGATTATGCTTCTTCAACTGGAGTTGAGGTTTTCTCTCCAGTGAGCCATACTCTGTTCAATCCCGCACACATTATAGAGAAAAACGGTGGGAAGCCACCTTTGAGTTATCAATCATTTCTGAAGGTTGCTGGGGAGCCCTCATGTGCTAAATCTGAACTTGTGATGTCTTATTCTTCACTTCCTCCAATTGGAGATATTGGAAACCTTGGCATTTCAGAAGTACCATCTCTTGAGGAACTTGGCTACAAAGATGATGAACAAGCTGATTGGACTCCTTTTAGAGGTGGTGAATCAGAAGCCTTAAAAAGATTGACTAAATCAATCAGTGATAAGGCATGGGTGGCAAACTTTGAGAAACCAAAGGGTGATCCATCTGCTTTCTTGAAGCCTGCTACTACAGTTATGTCACCATATTTGAAATTCGGATGCCTTTCTTCGAGGTACTTTTATCAATGCCTTCAAAATATTTATAAGGATGTTAAAAAGCATACATCGCCGCCAGTTTCTCTCCTGGGGCAGTTGTTGTGGCGAGAATTTTTCTATACCACTGCATTTGGAACTCCTAACTTTGACAAAATGAAGGGAAACCGGATCTGCAAACAGATTCCATGGAACGAGGATCATGCTATGTTGGCTGCTTGGAGGGACGGTAAGACAGGATACCCTTGGATTGATGCCATCATGGTTCAGCTTCTGAAATGGGGTTGGATGCACCATCTAGCGCGTCACTGTGTAGCCTGTTTTCTTACTCGTGGGGATCTGTTCATACATTGGGAACAAGGGCGTGATGTGTTTGAGAGACTTCTGATCGATTCAGACTGGGCAATCAACAATGGAAATTGGATGTGGTTATCATGTTCGTCGTTCTTTTACCAGTTCAACCGCATCTACTCTCCTATATCTTTCGGAAAGAAGTATGATCCTGATGGGAAGTACATTAGGCATTTTCTACCGGTACTGAAAGATATGCCAAAGCAATATATATATGAGCCATGGACAGCACCATTGAGCGTTCAAACTAAAGCAAACTGCATAGTCGGGAAGGACTACCCAAAGCCAATGGTATTGCACGATTCAGCAAGCAAGGAGTGCAAGAGGAAGATGGGTGAAGCATATGCATTGAACAAGAAGATGGATGGTAAAGTAGATGAAGAAAATTTGAGGGATTTGAGGAGAAAGCTTCAGAAAGATGAACATGAAGAGTCCAAAATCAGGAACCAACGACCAAAACTCAAATAG
Protein Sequence
- >AT3G15620.1
MQRFCVCSPSSYRLNPITSMATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYALNKKMDGKVDEENLRDLRRKLQKDEHEESKIRNQRPKLK - >AT3G15620.2
MQRFCVCSPSSYRLNPITSMATGSGSLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVLVRCLQEWKVKRLCFEYDTDPYYQALDVKVKDYASSTGVEVFSPVSHTLFNPAHIIEKNGGKPPLSYQSFLKVAGEPSCAKSELVMSYSSLPPIGDIGNLGISEVPSLEELGYKDDEQADWTPFRGGESEALKRLTKSISDKAWVANFEKPKGDPSAFLKPATTVMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKMKGNRICKQIPWNEDHAMLAAWRDGKTGYPWIDAIMVQLLKWGWMHHLARHCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISFGKKYDPDGKYIRHFLPVLKDMPKQYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYALNKKMDGKVDEENLRDLRRKLQKDEHEESKIRNQRPKLK