Information report for AT3G15510
Gene Details
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Functional Descriptions
- GO:0048317 — involved in — seed morphogenesis
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0048731 — involved in — system development
- GO:0045995 — involved in — regulation of embryonic development
- GO:0080060 — involved in — integument development
- GO:0009753 — involved in — response to jasmonic acid
- GO:0005634 — located in — nucleus
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0003700 — enables — DNA-binding transcription factor activity
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The CUP-SHAPED COTYLEDON1 gene of Arabidopsis regulates shoot apical meristem formation. DOI: 10.1242/dev.128.7.1127 ; PMID: 11245578
- A genome-wide analysis of blue-light regulation of Arabidopsis transcription factor gene expression during seedling development. DOI: 10.1104/pp.103.029439 ; PMID: 14605227
- Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DOI: 10.1093/dnares/10.6.239 ; PMID: 15029955
- Gene trap lines define domains of gene regulation in Arabidopsis petals and stamens. DOI: 10.1105/tpc.105.033985 ; PMID: 16055634
- Roles of ethylene receptor NTHK1 domains in plant growth, stress response and protein phosphorylation. DOI: 10.1016/j.febslet.2006.01.037 ; PMID: 16442528
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- NAC family proteins NARS1/NAC2 and NARS2/NAM in the outer integument regulate embryogenesis in Arabidopsis. DOI: 10.1105/tpc.108.060160 ; PMID: 18849494
- Enhanced Y1H assays for Arabidopsis. DOI: 10.1038/nmeth.1750 ; PMID: 22037706
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- Starting to gel: how Arabidopsis seed coat epidermal cells produce specialized secondary cell walls. DOI: 10.3390/ijms16023452 ; PMID: 25658798
- Transcript Profiling Identifies NAC-Domain Genes Involved in Regulating Wall Ingrowth Deposition in Phloem Parenchyma Transfer Cells of Arabidopsis thaliana. DOI: 10.3389/fpls.2018.00341 ; PMID: 29599795
- Insights into the role of transcription factors controlling mucilage production in the Arabidopsis seed coat. DOI: 10.1016/j.plantsci.2018.04.021 ; PMID: 29807590
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Review: More than sweet: New insights into the biology of phloem parenchyma transfer cells in Arabidopsis. DOI: 10.1016/j.plantsci.2021.110990 ; PMID: 34315604
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A654F8J1
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A654F8J1
- EnsemblPlants: AT3G15510.1
- Gramene: AT3G15510.1
- KEGG: ath:AT3G15510
- Orthologous matrix: NIAVCTN
- ExpressionAtlas: AT3G15510
- InterPro: IPR003441, IPR036093
- PANTHER: PTHR31719, PTHR31719:SF241
- SUPFAM: SSF101941
- PROSITE: PS51005
- Gene3D: 2.170.150.80
- OrthoDB: A0A654F8J1
- SWISS-MODEL: A0A654F8J1
Homologs
- Brassica napus GSBRNA2T00106219001, GSBRNA2T00104912001, GSBRNA2T00009990001, GSBRNA2T00019578001
- Brassica oleracea XP_013616372.1, XP_013583708.1, XP_013626443.1
- Brassica rapa XP_009146237.1, XP_009115491.1, XP_009135446.1
- Raphanus raphanistrum RrC11293_p1, RrC12216_p1, RrC12036_p1
Sequences
cDNA Sequence
- >AT3G15510.1
AAAGAACAGAGGATTAAAACCCACAAATTGGCGTTTTATACATCCCCATTTAAAAAGAATGGTAACGCCGACTCTGTGAAGCATTTTTCAGCACTCCTTTCCTTTCCCCCACAAACTAAACAAAAAACCATTAACAAAAAAACCATTCACAAAAAAAATAGAGAGAATCATCTGAGAGAGTAGTAGTGATGATATGATCGCTTCTTCTCCTACAATCTCAGAAACCTCCGATCACGGTTTTAGATATCTTCTACAACGGATACAATGGAGAGCACCGATTCTTCCGGTGGTCCACCACCGCCACAACCTAACCTTCCTCCAGGCTTCCGGTTTCACCCTACCGACGAAGAGCTTGTTGTTCACTACCTCAAACGCAAAGCAGCCTCTGCTCCTTTACCTGTCGCCATCATCGCCGAAGTCGATCTCTATAAATTTGATCCATGGGAACTTCCCGCTAAAGCATCGTTTGGAGAACAAGAATGGTACTTCTTTAGTCCACGAGATCGGAAGTATCCAAACGGAGCAAGACCAAACAGAGCGGCGACTTCAGGTTATTGGAAAGCGACCGGTACAGATAAACCGGTACTTGCTTCCGACGGTAACCAAAAGGTGGGCGTGAAGAAGGCACTAGTCTTCTACAGTGGTAAACCACCAAAAGGCGTTAAAAGTGATTGGATCATGCATGAGTATCGTCTCATCGAAAACAAACCAAACAATCGACCTCCTGGCTGTGATTTCGGCAACAAAAAAAACTCACTCAGACTTGATGATTGGGTGTTATGTAGAATCTACAAGAAGAACAACGCAAGTCGACATGTTGATAACGATAAGGATCATGATATGATCGATTACATTTTCAGGAAGATTCCTCCGTCTTTATCAATGGCGGCTGCTTCTACAGGACTTCACCAACATCATCATAATGTCTCAAGATCAATGAATTTCTTCCCTGGCAAATTCTCCGGTGGTGGTTACGGGATTTTCTCTGACGGTGGTAACACGAGTATATACGACGGCGGTGGCATGATCAACAATATTGGTACTGACTCAGTAGATCACGACAATAACGCTGACGTCGTTGGTTTAAATCATGCTTCGTCGTCAGGTCCTATGATGATGGCGAATTTGAAACGAACTCTCCCGGTGCCGTATTGGCCTGTAGCAGATGAGGAGCAAGATGCATCTCCGAGCAAACGGTTTCACGGTGTAGGAGGAGGAGGAGGAGATTGTTCGAACATGTCTTCCTCCATGATGGAAGAGACTCCACCATTGATGCAACAACAAGGTGGTGTGTTAGGAGATGGATTATTCAGAACGACATCGTACCAATTACCCGGTTTAAATTGGTACTCTTCTTAATCAAATGTGTTTCGCCGCCGGTGTGAAGAATTTTCCGGTGACAGTGAAGATTTTTTTCCGATTGGTGGGGTCATTTGCATGCATTATATAATTTGAGATTTGTGTATATGTTTTGGGTTAATTAATTGGTCACAGGGGTTAGAGGAAGAAGATTATTTAGAGAGCGGAGAAGAAGTGAGGCAACATATAGAAAACATAGGTTTAAAAAATATTACTGTTTGTTAAGTTTAATGATTAAATGTATAAATCTTATACTTAGATGTTTATATATAGTTTGTATAGATGCATATAGTTTCTCTCAATGCTATTTTGAGATTGTATTTTCTTGTAAAGGAAATGTTTTTTAAAAAAAAAAAAAAAAAGTTGTGTAACTATGTATTTTTCTTCACATATGTTGAAAATCACTGATGTTTTTGGACTGAGTTATTGGCTTATTGCTTATGAAAGTTTGGAGGGTATTTTATATAAATTAA
CDS Sequence
- >AT3G15510.1
ATGGAGAGCACCGATTCTTCCGGTGGTCCACCACCGCCACAACCTAACCTTCCTCCAGGCTTCCGGTTTCACCCTACCGACGAAGAGCTTGTTGTTCACTACCTCAAACGCAAAGCAGCCTCTGCTCCTTTACCTGTCGCCATCATCGCCGAAGTCGATCTCTATAAATTTGATCCATGGGAACTTCCCGCTAAAGCATCGTTTGGAGAACAAGAATGGTACTTCTTTAGTCCACGAGATCGGAAGTATCCAAACGGAGCAAGACCAAACAGAGCGGCGACTTCAGGTTATTGGAAAGCGACCGGTACAGATAAACCGGTACTTGCTTCCGACGGTAACCAAAAGGTGGGCGTGAAGAAGGCACTAGTCTTCTACAGTGGTAAACCACCAAAAGGCGTTAAAAGTGATTGGATCATGCATGAGTATCGTCTCATCGAAAACAAACCAAACAATCGACCTCCTGGCTGTGATTTCGGCAACAAAAAAAACTCACTCAGACTTGATGATTGGGTGTTATGTAGAATCTACAAGAAGAACAACGCAAGTCGACATGTTGATAACGATAAGGATCATGATATGATCGATTACATTTTCAGGAAGATTCCTCCGTCTTTATCAATGGCGGCTGCTTCTACAGGACTTCACCAACATCATCATAATGTCTCAAGATCAATGAATTTCTTCCCTGGCAAATTCTCCGGTGGTGGTTACGGGATTTTCTCTGACGGTGGTAACACGAGTATATACGACGGCGGTGGCATGATCAACAATATTGGTACTGACTCAGTAGATCACGACAATAACGCTGACGTCGTTGGTTTAAATCATGCTTCGTCGTCAGGTCCTATGATGATGGCGAATTTGAAACGAACTCTCCCGGTGCCGTATTGGCCTGTAGCAGATGAGGAGCAAGATGCATCTCCGAGCAAACGGTTTCACGGTGTAGGAGGAGGAGGAGGAGATTGTTCGAACATGTCTTCCTCCATGATGGAAGAGACTCCACCATTGATGCAACAACAAGGTGGTGTGTTAGGAGATGGATTATTCAGAACGACATCGTACCAATTACCCGGTTTAAATTGGTACTCTTCTTAA
Protein Sequence
- >AT3G15510.1
MESTDSSGGPPPPQPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNASRHVDNDKDHDMIDYIFRKIPPSLSMAAASTGLHQHHHNVSRSMNFFPGKFSGGGYGIFSDGGNTSIYDGGGMINNIGTDSVDHDNNADVVGLNHASSSGPMMMANLKRTLPVPYWPVADEEQDASPSKRFHGVGGGGGDCSNMSSSMMEETPPLMQQQGGVLGDGLFRTTSYQLPGLNWYSS