Information report for AT3G15390
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0009507 — located in — chloroplast
- GO:0005829 — located in — cytosol
- GO:0010267 — acts upstream of or within — ta-siRNA processing
- GO:0005634 — located in — nucleus
- GO:0003674 — enables — molecular_function
- sde5-2 — Accelerated juvenile to adult transition. Seedling leaves have elongated petioles. Leaves are elongated and downwardly curled. Abaxial richomes appear earlier (e.g. leaf 10-11). Mutants are also hyper-suceptible to CMV.
Functional Keywords
Literature and News
- The conserved RNA trafficking proteins HPR1 and TEX1 are involved in the production of endogenous and exogenous small interfering RNA in Arabidopsis. DOI: 10.1105/tpc.110.076638 ; PMID: 20798330
- Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome. DOI: 10.1016/j.cell.2012.10.054 ; PMID: 23313553
- SDE5, a putative RNA export protein, participates in plant innate immunity through a flagellin-dependent signaling pathway in Arabidopsis. DOI: 10.1038/s41598-017-07918-x ; PMID: 28851870
- Cooperative recruitment of RDR6 by SGS3 and SDE5 during small interfering RNA amplification in Arabidopsis. DOI: 10.1073/pnas.2102885118 ; PMID: 34408020
Gene Resources
- UniProt: A0A1I9LSZ6
- EMBL: CP002686
- AlphaFoldDB: A0A1I9LSZ6
- EnsemblPlants: AT3G15390.3
- Gramene: AT3G15390.3
- ExpressionAtlas: AT3G15390
- InterPro: IPR013899
- PANTHER: PTHR47872, PTHR47872:SF1
- SWISS-MODEL: A0A1I9LSZ6
Sequences
cDNA Sequence
- >AT3G15390.3
GGAAGCAAAGGCGCTTGCTTTTCGCAGCAAAGCCTATAGAAACTTTACTTCCTTCTCCTCTCGTCTCATGCACCGAATGTATTTCCCTGCTTAACCAATTCTCTACTTTGTCCTCTTCTTCTCCGTTTCGATTTTACAAGATTCGATCTTTTGCAATCGAAATACCTAATATTCCGATTCTCGATTCCGGCGTCTTTTGCTTCGGGCTTTTTTGTGGGAGGAATGTCAAAGATTGCAAGCTCTTCGAATAGTGATCCTGATTCAAGAAGCTTACAAGTGCTTCTCGATACTTTTGGTTCTCGTTTTTCTCTTGATGACATTGCCGCTGCTTACTGCCAAGCTAGCCAGAATGTCGATGTAGCTGGTGAGATTCTCTCTGCAATGGCTGAAAAGACGCCTCAATGTGACCAAGTTGAAATGAAGACAGCAACCTCAAAACCAACTCAGGTCTATGTTCCTAAGGAAGTTCCACGACAAGAGGATAGCAAAGCGAAAGTATGGAGGCCGAAGAGAAATTCTATATCAAATGGTACTGTTTCAAGTGTTATTGGTAAGGAGTATGCTAGAACCAGGCCTATATCAAATGCTCCCAAAGAAGCAACTAAACCATTGAAGATAAACTCAAGGGATATTCCAGAAACTGAGATATGGAGTGAAGAAATGCGAAAAAGTAACGAGGGAAAGATAAGCAGGGCTCCAACTGATGTTGAGGAATTTATTGTTAAGATGCTTGGAGAAGGTTTTCAAGCTAGCCAAGAAGTCATTCACCAGGTTCTTGAGTACGGAGAAACTGCTTGACTTTTCTGATACCAAGAAATATGCTGATGTTGGAATTTCCAATGAAGTTATGTCAAAAGTTGATCCTCAAAGACAATCTACATCCTGCAACCAAATGGAACTACAAAAAATTTCTCAGAGTGTTGGAGCAAGAACCTTTACAGGTTCACAGGAAGGGCGTAATGCTAAGAATGGTCTTGAAAAGGAAGTTTTAGAAGCTTTGTTCTCAGGTGCGGAAAGATATGTGGACAAACCAAAAGTAACTCGACATTTTGGAGAAAGGAGACCTGGAGTTGCTGGTCGTCCTGTTTTTAAACCTCTGGAAGACCCTTTTCAAGAGAGAGTAGTTGCTGTGAAACAATCGTCCAATACATCTAAAGAAGATGACGATGAAAATGAATTTAAGGCACATCGTAAAGCAGTACGCGAGCATTTGAATCAGATGAAAGAATATTATGGAGCTGCTGCAGAAGCATTCTCCAAAGGAGAAACCGAGCGAGCACACAGACTCGTGGAGAAGGGACACTTTTTTGGACAAAAAGCTCGAGAAGCAGATGACAAATCTGTAGCAAAGATGATTGACGTCAATCAAGAAGATGATTCAACTTACGAGGAAGACGAGGTAGTGACAGTAAATATGAATGAACACGAAGCAAAAGAAGCTCTTCGTCTTCTCAAGCGCCAACTTATTTACTTCTCTGGCATTTCATCTTTCAAGTACCTCAGAGTCCAATTGGGTGAGAAGAAGGAAGATTTCAAGAGCAAACGAAAGCATATCGTAAAGCTGCTGGAGGGAGAATCCATTCCTTGGACTGAAGAAGATGGCGGCCTCGTGATAATGATTCGGGTTGATGAGATTGACCCCAAGAAATTGAGTTTTGCCAAGAAATAA - >AT3G15390.1
GGAAGCAAAGGCGCTTGCTTTTCGCAGCAAAGCCTATAGAAACTTTACTTCCTTCTCCTCTCGTCTCATGCACCGAATGTATTTCCCTGCTTAACCAATTCTCTACTTTGTCCTCTTCTTCTCCGTTTCGATTTTACAAGATTCGATCTTTTGCAATCGAAATACCTAATATTCCGATTCTCGATTCCGGCGTCTTTTGCTTCGGGCTTTTTTGTGGGAGGAATGTCAAAGATTGCAAGCTCTTCGAATAGTGATCCTGATTCAAGAAGCTTACAAGTGCTTCTCGATACTTTTGGTTCTCGTTTTTCTCTTGATGACATTGCCGCTGCTTACTGCCAAGCTAGCCAGAATGTCGATGTAGCTGGTGAGATTCTCTCTGCAATGGCTGAAAAGACGCCTCAATGTGACCAAGTTGAAATGAAGACAGCAACCTCAAAACCAACTCAGGTCTATGTTCCTAAGGAAGTTCCACGACAAGAGGATAGCAAAGCGAAAGTATGGAGGCCGAAGAGAAATTCTATATCAAATGGTACTGTTTCAAGTGTTATTGGTAAGGAGTATGCTAGAACCAGGCCTATATCAAATGCTCCCAAAGAAGCAACTAAACCATTGAAGATAAACTCAAGGGATATTCCAGAAACTGAGATATGGAGTGAAGAAATGCGAAAAAGTAACGAGGGAAAGATAAGCAGGGCTCCAACTGATGTTGAGGAATTTATTGTTAAGATGCTTGGAGAAGGTTTTCAAGCTAGCCAAGAAGTCATTCACCAGGTTCTTGAGTACGGAGAAACTGCTTGACTTTTCTGATACCAAGAAATATGCTGATGTTGGAATTTCCAATGAAGTTATGTCAAAAGTTGATCCTCAAAGACAATCTACATCCTGCAACCAAATGGAACTACAAAAAATTTCTCAGAGTGTTGGAGCAAGAACCTTTACAGGTTCACAGGAAGGGCGTAATGCTAAGAATGGTCTTGAAAAGGAAGTTTTAGAAGCTTTGTTCTCAGGTGCGGAAAGATATGTGGACAAACCAAAAGTAACTCGACATTTTGGAGAAAGGAGACCTGGAGTTGCTGGTCGTCCTGTTTTTAAACCTCTGGAAGACCCTTTTCAAGAGAGAGTAGTTGCTGTGAAACAATCGTCCAATACATCTAAAGAAGATGACGATGAAAATGAATTTAAGGCACATCGTAAAGCAGTACGCGAGCATTTGAATCAGATGAAAGAATATTATGGAGCTGCTGCAGAAGCATTCTCCAAAGGAGAAACCGAGCGAGCACACAGACTCGTGGAGAAGGGACACTTTTTTGGACAAAAAGCTCGAGAAGCAGATGACAAATCTGTAGCAAAGATGATTGACGTCAATCAAGAAGATGATTCAACTTACGAGGAAGACGAGGTAGTGACAGTAAATATGAATGAACACGAAGCAAAAGAAGCTCTTCGTCTTCTCAAGCGCCAACTTATTTACTTCTCTGGCATTTCATCTTTCAAGTACCTCAGAGTCCAATTGGGTGAGAAGAAGGAAGATTTCAAGAGCAAACGAAAGCATATCGTAAAGCTGCTGGAGGGAGAATCCATTCCTTGGACTGAAGAAGATGGCGGCCTCGTGATAATGATTCGGGTTGATGAGATTGACCCCAAGAAATTGAGTTTTGCCAAGAAATAA - >AT3G15390.2
GGAAGCAAAGGCGCTTGCTTTTCGCAGCAAAGCCTATAGAAACTTTACTTCCTTCTCCTCTCGTCTCATGCACCGAATGTATTTCCCTGCTTAACCAATTCTCTACTTTGTCCTCTTCTTCTCCGTTTCGATTTTACAAGATTCGATCTTTTGCAATCGAAATACCTAATATTCCGATTCTCGATTCCGGCGTCTTTTGCTTCGGGCTTTTTTGTGGGAGGAATGTCAAAGATTGCAAGCTCTTCGAATAGTGATCCTGATTCAAGAAGCTTACAAGTGCTTCTCGATACTTTTGGTTCTCGTTTTTCTCTTGATGACATTGCCGCTGCTTACTGCCAAGCTAGCCAGAATGTCGATGTAGCTGGTGAGATTCTCTCTGCAATGGCTGAAAAGACGCCTCAATGTGACCAAGTTGAAATGAAGACAGCAACCTCAAAACCAACTCAGGTCTATGTTCCTAAGGAAGTTCCACGACAAGAGGATAGCAAAGCGAAAGTATGGAGGCCGAAGAGAAATTCTATATCAAATGGTACTGTTTCAAGTGTTATTGGTAAGGAGTATGCTAGAACCAGGCCTATATCAAATGCTCCCAAAGAAGCAACTAAACCATTGAAGATAAACTCAAGGGATATTCCAGAAACTGAGATATGGAGTGAAGAAATGCGAAAAAGTAACGAGGGAAAGATAAGCAGGGCTCCAACTGATGTTGAGGAATTTATTGTTAAGATGCTTGGAGAAGGTTTTCAAGCTAGCCAAGAAGTCATTCACCAGGTTCTTGAGTACGGAGAAACTGCTTGACTTTTCTGATACCAAGAAATATGCTGATGTTGGAATTTCCAATGAAGTTATGTCAAAAGTTGATCCTCAAAGACAATCTACATCCTGCAACCAAATGGAACTACAAAAAATTTCTCAGAGTGTTGGAGCAAGAACCTTTACAGGTTCACAGGAAGGGCGTAATGCTAAGAATGGTCTTGAAAAGGAAGTTTTAGAAGCTTTGTTCTCAGGTGCGGAAAGATATGTGGACAAACCAAAAGTAACTCGACATTTTGGAGAAAGGAGACCTGGAGTTGCTGGTCGTCCTGTTTTTAAACCTCTGGAAGACCCTTTTCAAGAGAGAGTAGTTGCTGTGAAACAATCGTCCAATACATCTAAAGAAGATGACGATGAAAATGAATTTAAGGCACATCGTAAAGCAGTACGCGAGCATTTGAATCAGATGAAAGAATATTATGGAGCTGCTGCAGAAGCATTCTCCAAAGGAGAAACCGAGCGAGCACACAGACTCGTGGAGAAGGGACACTTTTTTGGACAAAAAGCTCGAGAAGCAGATGACAAATCTGTAGCAAAGATGATTGACGTCAATCAAGAAGATGATTCAACTTACGAGGAAGACGAGGTAGTGACAGTAAATATGAATGAACACGAAGCAAAAGAAGCTCTTCGTCTTCTCAAGCGCCAACTTATTTACTTCTCTGGCATTTCATCTTTCAAGTACCTCAGAGTCCAATTGGGTGAGAAGAAGGAAGATTTCAAGAGCAAACGAAAGCATATCGTAAAGCTGCTGGAGGGAGAATCCATTCCTTGGACTGAAGAAGATGGCGGCCTCGTGATAATGATTCGGGTTGATGAGATTGACCCCAAGAAATTGAGTTTTGCCAAGAAATAA
CDS Sequence
- >AT3G15390.3
ATGTTGAGGAATTTATTGTTAAGATGCTTGGAGAAGGTTTTCAAGCTAGCCAAGAAGTCATTCACCAGGTTCTTGAGTACGGAGAAACTGCTTGACTTTTCTGATACCAAGAAATATGCTGATGTTGGAATTTCCAATGAAGTTATGTCAAAAGTTGATCCTCAAAGACAATCTACATCCTGCAACCAAATGGAACTACAAAAAATTTCTCAGAGTGTTGGAGCAAGAACCTTTACAGGTTCACAGGAAGGGCGTAATGCTAAGAATGGTCTTGAAAAGGAAGTTTTAGAAGCTTTGTTCTCAGGTGCGGAAAGATATGTGGACAAACCAAAAGTAACTCGACATTTTGGAGAAAGGAGACCTGGAGTTGCTGGTCGTCCTGTTTTTAAACCTCTGGAAGACCCTTTTCAAGAGAGAGTAGTTGCTGTGAAACAATCGTCCAATACATCTAAAGAAGATGACGATGAAAATGAATTTAAGGCACATCGTAAAGCAGTACGCGAGCATTTGAATCAGATGAAAGAATATTATGGAGCTGCTGCAGAAGCATTCTCCAAAGGAGAAACCGAGCGAGCACACAGACTCGTGGAGAAGGGACACTTTTTTGGACAAAAAGCTCGAGAAGCAGATGACAAATCTGTAGCAAAGATGATTGACGTCAATCAAGAAGATGATTCAACTTACGAGGAAGACGAGGTAGTGACAGTAAATATGAATGAACACGAAGCAAAAGAAGCTCTTCGTCTTCTCAAGCGCCAACTTATTTACTTCTCTGGCATTTCATCTTTCAAGTACCTCAGAGTCCAATTGGGTGAGAAGAAGGAAGATTTCAAGAGCAAACGAAAGCATATCGTAAAGCTGCTGGAGGGAGAATCCATTCCTTGGACTGAAGAAGATGGCGGCCTCGTGATAATGATTCGGGTTGATGAGATTGACCCCAAGAAATTGAGTTTTGCCAAGAAATAA - >AT3G15390.1
ATGTTGAGGAATTTATTGTTAAGATGCTTGGAGAAGGTTTTCAAGCTAGCCAAGAAGTCATTCACCAGGTTCTTGAGTACGGAGAAACTGCTTGACTTTTCTGATACCAAGAAATATGCTGATGTTGGAATTTCCAATGAAGTTATGTCAAAAGTTGATCCTCAAAGACAATCTACATCCTGCAACCAAATGGAACTACAAAAAATTTCTCAGAGTGTTGGAGCAAGAACCTTTACAGGTTCACAGGAAGGGCGTAATGCTAAGAATGGTCTTGAAAAGGAAGTTTTAGAAGCTTTGTTCTCAGGTGCGGAAAGATATGTGGACAAACCAAAAGTAACTCGACATTTTGGAGAAAGGAGACCTGGAGTTGCTGGTCGTCCTGTTTTTAAACCTCTGGAAGACCCTTTTCAAGAGAGAGTAGTTGCTGTGAAACAATCGTCCAATACATCTAAAGAAGATGACGATGAAAATGAATTTAAGGCACATCGTAAAGCAGTACGCGAGCATTTGAATCAGATGAAAGAATATTATGGAGCTGCTGCAGAAGCATTCTCCAAAGGAGAAACCGAGCGAGCACACAGACTCGTGGAGAAGGGACACTTTTTTGGACAAAAAGCTCGAGAAGCAGATGACAAATCTGTAGCAAAGATGATTGACGTCAATCAAGAAGATGATTCAACTTACGAGGAAGACGAGGTAGTGACAGTAAATATGAATGAACACGAAGCAAAAGAAGCTCTTCGTCTTCTCAAGCGCCAACTTATTTACTTCTCTGGCATTTCATCTTTCAAGTACCTCAGAGTCCAATTGGGTGAGAAGAAGGAAGATTTCAAGAGCAAACGAAAGCATATCGTAAAGCTGCTGGAGGGAGAATCCATTCCTTGGACTGAAGAAGATGGCGGCCTCGTGATAATGATTCGGGTTGATGAGATTGACCCCAAGAAATTGAGTTTTGCCAAGAAATAA - >AT3G15390.2
ATGTTGAGGAATTTATTGTTAAGATGCTTGGAGAAGGTTTTCAAGCTAGCCAAGAAGTCATTCACCAGGTTCTTGAGTACGGAGAAACTGCTTGACTTTTCTGATACCAAGAAATATGCTGATGTTGGAATTTCCAATGAAGTTATGTCAAAAGTTGATCCTCAAAGACAATCTACATCCTGCAACCAAATGGAACTACAAAAAATTTCTCAGAGTGTTGGAGCAAGAACCTTTACAGGTTCACAGGAAGGGCGTAATGCTAAGAATGGTCTTGAAAAGGAAGTTTTAGAAGCTTTGTTCTCAGGTGCGGAAAGATATGTGGACAAACCAAAAGTAACTCGACATTTTGGAGAAAGGAGACCTGGAGTTGCTGGTCGTCCTGTTTTTAAACCTCTGGAAGACCCTTTTCAAGAGAGAGTAGTTGCTGTGAAACAATCGTCCAATACATCTAAAGAAGATGACGATGAAAATGAATTTAAGGCACATCGTAAAGCAGTACGCGAGCATTTGAATCAGATGAAAGAATATTATGGAGCTGCTGCAGAAGCATTCTCCAAAGGAGAAACCGAGCGAGCACACAGACTCGTGGAGAAGGGACACTTTTTTGGACAAAAAGCTCGAGAAGCAGATGACAAATCTGTAGCAAAGATGATTGACGTCAATCAAGAAGATGATTCAACTTACGAGGAAGACGAGGTAGTGACAGTAAATATGAATGAACACGAAGCAAAAGAAGCTCTTCGTCTTCTCAAGCGCCAACTTATTTACTTCTCTGGCATTTCATCTTTCAAGTACCTCAGAGTCCAATTGGGTGAGAAGAAGGAAGATTTCAAGAGCAAACGAAAGCATATCGTAAAGCTGCTGGAGGGAGAATCCATTCCTTGGACTGAAGAAGATGGCGGCCTCGTGATAATGATTCGGGTTGATGAGATTGACCCCAAGAAATTGAGTTTTGCCAAGAAATAA
Protein Sequence
- >AT3G15390.3
MLRNLLLRCLEKVFKLAKKSFTRFLSTEKLLDFSDTKKYADVGISNEVMSKVDPQRQSTSCNQMELQKISQSVGARTFTGSQEGRNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGERRPGVAGRPVFKPLEDPFQERVVAVKQSSNTSKEDDDENEFKAHRKAVREHLNQMKEYYGAAAEAFSKGETERAHRLVEKGHFFGQKAREADDKSVAKMIDVNQEDDSTYEEDEVVTVNMNEHEAKEALRLLKRQLIYFSGISSFKYLRVQLGEKKEDFKSKRKHIVKLLEGESIPWTEEDGGLVIMIRVDEIDPKKLSFAKK - >AT3G15390.1
MLRNLLLRCLEKVFKLAKKSFTRFLSTEKLLDFSDTKKYADVGISNEVMSKVDPQRQSTSCNQMELQKISQSVGARTFTGSQEGRNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGERRPGVAGRPVFKPLEDPFQERVVAVKQSSNTSKEDDDENEFKAHRKAVREHLNQMKEYYGAAAEAFSKGETERAHRLVEKGHFFGQKAREADDKSVAKMIDVNQEDDSTYEEDEVVTVNMNEHEAKEALRLLKRQLIYFSGISSFKYLRVQLGEKKEDFKSKRKHIVKLLEGESIPWTEEDGGLVIMIRVDEIDPKKLSFAKK - >AT3G15390.2
MLRNLLLRCLEKVFKLAKKSFTRFLSTEKLLDFSDTKKYADVGISNEVMSKVDPQRQSTSCNQMELQKISQSVGARTFTGSQEGRNAKNGLEKEVLEALFSGAERYVDKPKVTRHFGERRPGVAGRPVFKPLEDPFQERVVAVKQSSNTSKEDDDENEFKAHRKAVREHLNQMKEYYGAAAEAFSKGETERAHRLVEKGHFFGQKAREADDKSVAKMIDVNQEDDSTYEEDEVVTVNMNEHEAKEALRLLKRQLIYFSGISSFKYLRVQLGEKKEDFKSKRKHIVKLLEGESIPWTEEDGGLVIMIRVDEIDPKKLSFAKK