Gene Details:

• Gene ID: AT3G15390
• Gene Symbol: SDE5
• Gene Name: silencing defective 5
• Description: silencing defective 5;(source:Araport11)
• TAIR Accession: locus:2090181
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G15390.1     AT3G15390.2     AT3G15390.3

Plant Ontology Annotations:

• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

Gene Ontology:

• GO:0009507  — located in — chloroplast
• GO:0005829  — located in — cytosol
• GO:0010267  — acts upstream of or within — ta-siRNA processing
• GO:0005634  — located in — nucleus
• GO:0003674  — enables — molecular_function

Germplasm Phenotype:

• sde5-2  — Accelerated juvenile to adult transition. Seedling leaves have elongated petioles. Leaves are elongated and downwardly curled. Abaxial richomes appear earlier (e.g. leaf 10-11). Mutants are also hyper-suceptible to CMV.

Function-related keywords:

• plant sperm cell

Literature:

• The conserved RNA trafficking proteins HPR1 and TEX1 are involved in the production of endogenous and exogenous small interfering RNA in Arabidopsis.   DOI:  10.1105/tpc.110.076638 ;  PMID:  20798330
• Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.   DOI:  10.1016/j.cell.2012.10.054 ;  PMID:  23313553
• SDE5, a putative RNA export protein, participates in plant innate immunity through a flagellin-dependent signaling pathway in Arabidopsis.   DOI:  10.1038/s41598-017-07918-x ;  PMID:  28851870
• Cooperative recruitment of RDR6 by SGS3 and SDE5 during small interfering RNA amplification in Arabidopsis.   DOI:  10.1073/pnas.2102885118 ;  PMID:  34408020

Sequences: