Gene Details:
- Gene ID: AT3G15380
- Gene Symbol: AtCTL1, CHER1, CTL1
- Gene Name: choline transporter-like 1, choline transporter-like 1, choline transporter-like 1
- Description: Plasma-membrane choline transporter family protein;(source:Araport11)
- TAIR Accession: locus:2090171
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Gene Ontology:
- GO:0030100 — involved in — regulation of endocytosis
- GO:0055088 — involved in — lipid homeostasis
- GO:0051510 — involved in — regulation of unidimensional cell growth
- GO:0010088 — acts upstream of or within — phloem development
- GO:0009524 — located in — phragmoplast
- GO:0032588 — located in — trans-Golgi network membrane
- GO:0009551 — located in — secondary plasmodesma
- GO:0015871 — acts upstream of or within — choline transport
- GO:0010051 — acts upstream of or within — xylem and phloem pattern formation
- GO:0010067 — involved in — procambium histogenesis
- GO:0016192 — involved in — vesicle-mediated transport
- GO:0048366 — involved in — leaf development
- GO:0097218 — located in — sieve plate
- GO:0055085 — involved in — transmembrane transport
- GO:0048364 — acts upstream of or within — root development
- GO:0009705 — located in — plant-type vacuole membrane
- GO:0015220 — enables — choline transmembrane transporter activity
- GO:0010497 — involved in — plasmodesmata-mediated intercellular transport
- GO:0015871 — involved in — choline transport
- GO:0005802 — located in — trans-Golgi network
- GO:0009663 — involved in — plasmodesma organization
- GO:0015031 — involved in — protein transport
- GO:0048364 — involved in — root development
- GO:0090603 — acts upstream of or within — sieve element differentiation
- GO:0009506 — located in — plasmodesma
- GO:0005634 — located in — nucleus
- GO:0005769 — colocalizes with — early endosome
- GO:0031901 — located in — early endosome membrane
- GO:0016020 — is active in — membrane
- GO:2000012 — involved in — regulation of auxin polar transport
- GO:0005886 — located in — plasma membrane
- GO:0022857 — enables — transmembrane transporter activity
- GO:0050801 — involved in — monoatomic ion homeostasis
- GO:0055044 — located in — symplast
- GO:0009663 — acts upstream of or within — plasmodesma organization
Germplasm Phenotype:
- SALK_065853C — Reduced levels of choline and phosphocholine. Impaired in formation of secondary plasmodesmata (PD) and maturation of simple to complex PD.
- cher1-5/MP17?GFP — Dwarf stature,higher than normal accumulation of starches and sugars.Altered lipid profile.
Literature:
- Comparative proteomic profiling of the choline transporter-like1 (CHER1) mutant provides insights into plasmodesmata composition of fully developed Arabidopsis thaliana leaves. DOI: 10.1111/tpj.13702 ; PMID: 28865150
- Arabidopsis choline transporter-like 1 (CTL1) regulates secretory trafficking of auxin transporters to control seedling growth. DOI: 10.1371/journal.pbio.2004310 ; PMID: 29283991
- Sound as a stimulus in associative learning for heat stress in Arabidopsis. DOI: 10.1080/19420889.2020.1713426 ; PMID: 32010424
- Choline transporter-like 1 (CTL1) positively regulates apical hook development in etiolated Arabidopsis seedlings. DOI: 10.1016/j.bbrc.2020.02.124 ; PMID: 32111354
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequences:
cDNA Sequence
- >AT3G15380.1
GAAAGAGAGAGAGAGAAGACACTTAGTAAAGAAGGTCTGTGTGCTGTTCTCTCCGAAATTCCTTTTTTTGGTCTCGAGGGTTTTTCAGACTGTGAAGAGACATAGCTGTGGCAAAGATGAGAGGACCTTTAGGAGCAGTGATTGGAAGATATACTTCAAGTGATGGGAGTGCTCCAAATGATGGGATCATCAAGCACAATAGAAAGTGCAGAGATATTACGTTTCTCATCATCTTCATTGCCTTTTGGGTTTCAATGATTGTCAATTCCAGCTTTGGTTTCAACCAAGGCAACCCATTAAGACTCACATATGGATTGGACTATGAAGGGAATGTGTGTGGTAGCAAGCATCGTCACCGTGACCTTACTCAACTTGAGCTTAGATATTGGTTAAACCCTAACCAAGTTTATGAAAGTGGTTTGAAAGATGGGGAACTTAAATTGGCTAATGCTAGAACTATTTGTCTCTTGGATTGCCCTGCACCTTCTGATGATACTCTCAACTGGGTATGTGACTATCCTGACGGCGAGATTCGTCTCAAGATGAATGATTGGATCGATAGGAACTATGATTATTTTGAGTTTCTTACTCCAGAAATGAGGAATTCCTCTCTTCAGCTTCAGGGTCCTTGTTACCCTGTAATATTCCCTAGTGTGAATGTTTATTGGAGCTGCCAATATATTGCTCGTGCTTCAAATTCATCCTTACGCCACTGGCAGCAGATGGGTGGTGTTAATATTCAAGAGGACATGATCATAGACAAATCAATTAGAAGGTCAATGAACTCTCGTGCCTCAGTTCTAAAGCGTTATGTGGCTGATATTGGGAAGTCATGGCCAGTATTGATCGTTTGTGGAGGCCTTGTTCCACTGTTTCTATCCATTATTTGGCTGCTTCTTATTCGACATTTTGTTGCCGCCATGCCCTGGATAACTGTTGTCCTTTTCAACATGCTCTTAATATCAGTCACAGTGTTCTATTACCTGAAAGCTGGATGGATTGGGAATGATGCTGTAACACCTATTATTGGTGAGCATGACCCATACTTTCATGTGTATGGTCGAGAACTGACTCATGTTCGTGGAGTTGCCATTCTGATGACTTTTATCTCTGTTGTTGCTATTCTCACTTCAATTGCCATTATCCGCCGAATTCTCATGGCAACATCAGTCCTCAAGGTAGCTGCTAAAGTAATTGGAGAAGTTCAAGCGCTTATTATATTCCCGGCTATACCGTTCGCGATGCTAGCAATATTCTATATGTTCTGGATATCAGCGGCTCTCCATCTCTTCAGTTCTGGTCAAGTTGTTCAGAACAACTGCAACAACACTAACTGCTGTGCGTATGATCTCGTGTTAAAGAAAGTTAATTGTGACCGTTGTTGCGGTTATAGCATACATTACACCCCTCACATCACCATTGCTATATTCTTCCACCTGTTTGGTTGCTATTGGGCTACACAGTTCTTCATTGCATCTTCTGCGACAGTGATTGCTGGCTCTGTTGCCTCCTATTATTGGGCTCAAGGGGAAGCATCGCCAGAGATACCGTTTCTTCCTGTTTTCGCATCAATGAAGCGGCTTGCACGCTACAACCTAGGATCCGTGGCTCTTGGTTCACTCATTGTCTCTTTTGTTGAGTCTGTTCGGTTCATTCTCGAAGCAATTCGTCGTAAAACAAAAGTAAGCGGGACCATACCTGATCACTGGTTTTGGAGAATGGCTCATTACACTTCACGTGGTTGTCTCAAAAGTGTGGAGTGGACCATCAAATCGGTTAACCGTAATGCCTACATAATGATTGCTATAACAGGGAAAAGCTTCTGCAAATCGTCTGCAATCGCGACAGAGCTGATCATAAGCAACATTCTGAGGATAGGGAAAGTTAATGTGATAGGAGATGTTATATTGTTTCTAGGAAAGCTTTGTGTGAGTCTCTTCAGTGCTCTCTTTGGCTTCTTGATGTTGGATTCGCACCGATATCGTGCTTCTCACAACAAAGTCTCATCCCCGCTATTACCTGTTTTGGCATGTTGGGCATTGGGGTATATTGTGGCAACACTTTTCTTTGCGGTGGTTGAGATGTCGATAGACACCATCATTCTCTCCTTCTGTCAAGACTCAGAGGAGAATCAAGGGAATGCTCAGCACGCACCACCTCTTCTGCTTGAAACTTTAGATAGCAATCAGGAGGAAGAGGTTCAGAGTCTTACTCACTGATAGATCCATACTGTATAAGTTTTGTTTCTTCTTTGGTTGGCCGGTTTATATGGTTTTTTAAAATAGAATCTTTTATCTCTACAACATTCTAAGCATATTGTAATGTCAGATGGCTTGATAATTCTTCGATTCCGAAACCAAAAATCATATTTCCGC
CDS Sequence
- >AT3G15380.1
ATGAGAGGACCTTTAGGAGCAGTGATTGGAAGATATACTTCAAGTGATGGGAGTGCTCCAAATGATGGGATCATCAAGCACAATAGAAAGTGCAGAGATATTACGTTTCTCATCATCTTCATTGCCTTTTGGGTTTCAATGATTGTCAATTCCAGCTTTGGTTTCAACCAAGGCAACCCATTAAGACTCACATATGGATTGGACTATGAAGGGAATGTGTGTGGTAGCAAGCATCGTCACCGTGACCTTACTCAACTTGAGCTTAGATATTGGTTAAACCCTAACCAAGTTTATGAAAGTGGTTTGAAAGATGGGGAACTTAAATTGGCTAATGCTAGAACTATTTGTCTCTTGGATTGCCCTGCACCTTCTGATGATACTCTCAACTGGGTATGTGACTATCCTGACGGCGAGATTCGTCTCAAGATGAATGATTGGATCGATAGGAACTATGATTATTTTGAGTTTCTTACTCCAGAAATGAGGAATTCCTCTCTTCAGCTTCAGGGTCCTTGTTACCCTGTAATATTCCCTAGTGTGAATGTTTATTGGAGCTGCCAATATATTGCTCGTGCTTCAAATTCATCCTTACGCCACTGGCAGCAGATGGGTGGTGTTAATATTCAAGAGGACATGATCATAGACAAATCAATTAGAAGGTCAATGAACTCTCGTGCCTCAGTTCTAAAGCGTTATGTGGCTGATATTGGGAAGTCATGGCCAGTATTGATCGTTTGTGGAGGCCTTGTTCCACTGTTTCTATCCATTATTTGGCTGCTTCTTATTCGACATTTTGTTGCCGCCATGCCCTGGATAACTGTTGTCCTTTTCAACATGCTCTTAATATCAGTCACAGTGTTCTATTACCTGAAAGCTGGATGGATTGGGAATGATGCTGTAACACCTATTATTGGTGAGCATGACCCATACTTTCATGTGTATGGTCGAGAACTGACTCATGTTCGTGGAGTTGCCATTCTGATGACTTTTATCTCTGTTGTTGCTATTCTCACTTCAATTGCCATTATCCGCCGAATTCTCATGGCAACATCAGTCCTCAAGGTAGCTGCTAAAGTAATTGGAGAAGTTCAAGCGCTTATTATATTCCCGGCTATACCGTTCGCGATGCTAGCAATATTCTATATGTTCTGGATATCAGCGGCTCTCCATCTCTTCAGTTCTGGTCAAGTTGTTCAGAACAACTGCAACAACACTAACTGCTGTGCGTATGATCTCGTGTTAAAGAAAGTTAATTGTGACCGTTGTTGCGGTTATAGCATACATTACACCCCTCACATCACCATTGCTATATTCTTCCACCTGTTTGGTTGCTATTGGGCTACACAGTTCTTCATTGCATCTTCTGCGACAGTGATTGCTGGCTCTGTTGCCTCCTATTATTGGGCTCAAGGGGAAGCATCGCCAGAGATACCGTTTCTTCCTGTTTTCGCATCAATGAAGCGGCTTGCACGCTACAACCTAGGATCCGTGGCTCTTGGTTCACTCATTGTCTCTTTTGTTGAGTCTGTTCGGTTCATTCTCGAAGCAATTCGTCGTAAAACAAAAGTAAGCGGGACCATACCTGATCACTGGTTTTGGAGAATGGCTCATTACACTTCACGTGGTTGTCTCAAAAGTGTGGAGTGGACCATCAAATCGGTTAACCGTAATGCCTACATAATGATTGCTATAACAGGGAAAAGCTTCTGCAAATCGTCTGCAATCGCGACAGAGCTGATCATAAGCAACATTCTGAGGATAGGGAAAGTTAATGTGATAGGAGATGTTATATTGTTTCTAGGAAAGCTTTGTGTGAGTCTCTTCAGTGCTCTCTTTGGCTTCTTGATGTTGGATTCGCACCGATATCGTGCTTCTCACAACAAAGTCTCATCCCCGCTATTACCTGTTTTGGCATGTTGGGCATTGGGGTATATTGTGGCAACACTTTTCTTTGCGGTGGTTGAGATGTCGATAGACACCATCATTCTCTCCTTCTGTCAAGACTCAGAGGAGAATCAAGGGAATGCTCAGCACGCACCACCTCTTCTGCTTGAAACTTTAGATAGCAATCAGGAGGAAGAGGTTCAGAGTCTTACTCACTGA
Protein Sequence
- >AT3G15380.1
MRGPLGAVIGRYTSSDGSAPNDGIIKHNRKCRDITFLIIFIAFWVSMIVNSSFGFNQGNPLRLTYGLDYEGNVCGSKHRHRDLTQLELRYWLNPNQVYESGLKDGELKLANARTICLLDCPAPSDDTLNWVCDYPDGEIRLKMNDWIDRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPSVNVYWSCQYIARASNSSLRHWQQMGGVNIQEDMIIDKSIRRSMNSRASVLKRYVADIGKSWPVLIVCGGLVPLFLSIIWLLLIRHFVAAMPWITVVLFNMLLISVTVFYYLKAGWIGNDAVTPIIGEHDPYFHVYGRELTHVRGVAILMTFISVVAILTSIAIIRRILMATSVLKVAAKVIGEVQALIIFPAIPFAMLAIFYMFWISAALHLFSSGQVVQNNCNNTNCCAYDLVLKKVNCDRCCGYSIHYTPHITIAIFFHLFGCYWATQFFIASSATVIAGSVASYYWAQGEASPEIPFLPVFASMKRLARYNLGSVALGSLIVSFVESVRFILEAIRRKTKVSGTIPDHWFWRMAHYTSRGCLKSVEWTIKSVNRNAYIMIAITGKSFCKSSAIATELIISNILRIGKVNVIGDVILFLGKLCVSLFSALFGFLMLDSHRYRASHNKVSSPLLPVLACWALGYIVATLFFAVVEMSIDTIILSFCQDSEENQGNAQHAPPLLLETLDSNQEEEVQSLTH