Information report for AT3G15355
Gene Details
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Functional Descriptions
- GO:0019538 — acts upstream of or within — protein metabolic process
- GO:0009057 — acts upstream of or within — macromolecule catabolic process
- GO:0061631 — enables — ubiquitin conjugating enzyme activity
- GO:0005634 — located in — nucleus
- GO:0033993 — acts upstream of or within — response to lipid
Functional Keywords
Literature and News
- Ubiquitylation in plants: a post-genomic look at a post-translational modification. DOI: 10.1016/s1360-1385(01)02080-5 ; PMID: 11590065
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Genome-wide association mapping combined with reverse genetics identifies new effectors of low water potential-induced proline accumulation in Arabidopsis. DOI: 10.1104/pp.113.224014 ; PMID: 24218491
- Wheat germ-based protein libraries for the functional characterisation of the Arabidopsis E2 ubiquitin conjugating enzymes and the RING-type E3 ubiquitin ligase enzymes. DOI: 10.1186/s12870-015-0660-9 ; PMID: 26556605
Gene Resources
- UniProt: A0A178VG79
- EMBL: CACRSJ010000106, LUHQ01000003
- AlphaFoldDB: A0A178VG79
- EnsemblPlants: AT3G15355.1
- Gramene: AT3G15355.1
- KEGG: ath:AT3G15355
- Orthologous matrix: NTCRVKR
- ExpressionAtlas: AT3G15355
- InterPro: IPR000608, IPR016135
- PANTHER: PTHR46116, PTHR46116:SF41
- SUPFAM: SSF54495
- PROSITE: PS50127
- Gene3D: 3.10.110.10
- SWISS-MODEL: A0A178VG79
- Conserved Domain Database: cd23837
Homologs
- Brassica rapa Bra017410
- Oryza sativa LTN1;OsPHO2, OsUBC18
- Solanum lycopersicum Solyc02g067420.3
Sequences
cDNA Sequence
- >AT3G15355.1
TCACTGTTTTAATTTAGGTCTTTAATTTATTAAGATTTAGGATTAATAGAGAGAAAGAGGAATTGGTTTTAAGTGTTAAGAGAGAAAAGCCTTTGCGCAATCTCACTGTGTGTTGGTATATATTACGGCGCCAAGGTTTCTTTGATCGATTTCTTCTTCTTCTTCTGGAAAATTATCTCGTTTTCCGTTTTTAGTTCTTTGAGTTTGGGATCGTTCAATGGAGCCCAACGTAGTGGAGATCGCTACTCCTCCTGCCGCTTCTTGCTCGAGAATTCGAACGCCAACAAAGGCTGAAACTCCAGAAGTGATTGATGTGGAGGAATATGATTTGCAAAACGGTGGTGTTCCTAATGGCAACAATGTTGATTATAAGAACAAAGGGAAGGCTATAGACTTTGATTCCATGTCTTACGGTGACTATGGTGAAGAAGATGAGTATGCTGTGGGATCTCCTGGTGATGATTATGGTTATCCTGAATCATCTCCACTATCAAATAGTTTGTTAGACCCAGAGTCTTTGATCTATGAAGACGACGAAAACTATTCCGAACAATATGACTTTGAAATGGAGGCGGAGCCTGATAATTACTCCATGTATCAAGACCTTTTCGATGGTAAGGATATCCCAACTGGTGTGGAGGTTTCAATGGATTGGTTTCCAAATTCAGCTGACAAGGAATCAGCGAGTAGTAGCAAATCGTCTCATGCTAATAACGGGAATAACAGTTCCAAGAAAGCAACAAAAGCAAGTGGAATCCATTCTCAATTTTCTTCAGATATGGAAACCCCTGTAGCTCAACCATGGAATGCTTTACCGCACAAAGCTGAAGGAGTCATACCAAACTCTGCTTATGCCTTGCCACAGAACAGCAAGGCTTTTCAACCACCTTACGCTGTCCACTATTCAGCCCTTAAAACTGCTTTTTCCAATTATCTTCAGCCTCAGACTCCTGATACCGTATTGGGGGAGGCTCCAGCTCCTGCTGCAGGTTCTTCTGGTTTATTGCCACCAAACACACCCGGTTTTAAAAGTAATGCTGCTCGGTTTAAAGAGGAGCCGCCTATATTACCTCCGGATGATTCCAGAGTTAAGAGAAATATGGAGGATTATCTTGGGCTTTATTTGTTTTTCAAAAGATTTGACATCGTCGAAGATTTTTCAGATCACCACTATGCTTCTAAGGGAACAACTTCAAAGCAGCATTCAAAGGATTGGGCGAAAAGGATCCAAGACGAGTGGAGAATTCTTGAGAAAGATTTACCAGAGATGATATTTGTCAGAGCTTATGAATCTAGGATGGATCTTTTAAGGGCTGTAATTATCGGAGCCCAAGGAACTCCCTACCATGATGGTCTCTTCTTTTTTGATATCTTCTTCCCGGATACATACCCTTCTACGCCACCGATTGTTCATTACCATTCTGGTGGGCTAAGAATCAACCCAAATCTGTACAATTGTGGGAAAGTGTGTCTGAGTCTTCTCGGCACTTGGAGTGGTAACCAGAGGGAGAAATGGATCCCCAACACTTCGACGATGCTACAAGTTCTTGTCTCGATCCAAGGTCTAATCTTAAATCAAAAACCTTACTTCAACGAGCCCGGCTACGAGAGGTCAGCAGGTTCTGCACATGGTGAGAGTACCTCTAAAGCTTACAGCGAAAACACATTCATACTGTCTTTAAAGACTATGGTTTACACCATGAGGAGACCACCCAAGTATTTTGAAGACTTTGCGTATGGACATTTCTTCAGCTGTGCTCACGACGTGTTGAAGGCGTGTAATGCTTACAGAAACGGAGCTACACCGGGATATCTGGTGAAGGGGGCTCCAGATGTGGAAGAGAATAGCGCGGGCATGAGCTCTCTGAAGTTTAGGACAGATGTGGCTACCTTTGTGGAGACAGTGCTGTTGAAAGAGTTTATTCTTCTAGGTGTCCTTGGTCTCGAACCGGAAGAAGAAGAAAAAACACCTGAGACTATAATCGTTGCAGAGAGTAGCAAATGTACCAGATCAAGGTCCAAGAGAGACAGAGTTTCTTCTAGTTGATCTCCATTGCTCCCTTTTTTTTGTCCTTAATTTTTCTTAATTTCTGAAGAAACCGGTGACTTAATTAGTTTCTCCCTTCTTACAATCATGGATCCTCTTTTTTTCTCTTAACTATGACATAAATCTTAAAAGACTATTGAGAACTGAGAAGTCACTCTCATATGTACAGTTCCCTTTATCAGTCAGATTTATTATAGCCTCAATTTTCTGAGCTACCAGAGAAGTGAGTAAAAGTCAACGATACAAGGTTTGGATTTTGA
CDS Sequence
- >AT3G15355.1
ATGGAGCCCAACGTAGTGGAGATCGCTACTCCTCCTGCCGCTTCTTGCTCGAGAATTCGAACGCCAACAAAGGCTGAAACTCCAGAAGTGATTGATGTGGAGGAATATGATTTGCAAAACGGTGGTGTTCCTAATGGCAACAATGTTGATTATAAGAACAAAGGGAAGGCTATAGACTTTGATTCCATGTCTTACGGTGACTATGGTGAAGAAGATGAGTATGCTGTGGGATCTCCTGGTGATGATTATGGTTATCCTGAATCATCTCCACTATCAAATAGTTTGTTAGACCCAGAGTCTTTGATCTATGAAGACGACGAAAACTATTCCGAACAATATGACTTTGAAATGGAGGCGGAGCCTGATAATTACTCCATGTATCAAGACCTTTTCGATGGTAAGGATATCCCAACTGGTGTGGAGGTTTCAATGGATTGGTTTCCAAATTCAGCTGACAAGGAATCAGCGAGTAGTAGCAAATCGTCTCATGCTAATAACGGGAATAACAGTTCCAAGAAAGCAACAAAAGCAAGTGGAATCCATTCTCAATTTTCTTCAGATATGGAAACCCCTGTAGCTCAACCATGGAATGCTTTACCGCACAAAGCTGAAGGAGTCATACCAAACTCTGCTTATGCCTTGCCACAGAACAGCAAGGCTTTTCAACCACCTTACGCTGTCCACTATTCAGCCCTTAAAACTGCTTTTTCCAATTATCTTCAGCCTCAGACTCCTGATACCGTATTGGGGGAGGCTCCAGCTCCTGCTGCAGGTTCTTCTGGTTTATTGCCACCAAACACACCCGGTTTTAAAAGTAATGCTGCTCGGTTTAAAGAGGAGCCGCCTATATTACCTCCGGATGATTCCAGAGTTAAGAGAAATATGGAGGATTATCTTGGGCTTTATTTGTTTTTCAAAAGATTTGACATCGTCGAAGATTTTTCAGATCACCACTATGCTTCTAAGGGAACAACTTCAAAGCAGCATTCAAAGGATTGGGCGAAAAGGATCCAAGACGAGTGGAGAATTCTTGAGAAAGATTTACCAGAGATGATATTTGTCAGAGCTTATGAATCTAGGATGGATCTTTTAAGGGCTGTAATTATCGGAGCCCAAGGAACTCCCTACCATGATGGTCTCTTCTTTTTTGATATCTTCTTCCCGGATACATACCCTTCTACGCCACCGATTGTTCATTACCATTCTGGTGGGCTAAGAATCAACCCAAATCTGTACAATTGTGGGAAAGTGTGTCTGAGTCTTCTCGGCACTTGGAGTGGTAACCAGAGGGAGAAATGGATCCCCAACACTTCGACGATGCTACAAGTTCTTGTCTCGATCCAAGGTCTAATCTTAAATCAAAAACCTTACTTCAACGAGCCCGGCTACGAGAGGTCAGCAGGTTCTGCACATGGTGAGAGTACCTCTAAAGCTTACAGCGAAAACACATTCATACTGTCTTTAAAGACTATGGTTTACACCATGAGGAGACCACCCAAGTATTTTGAAGACTTTGCGTATGGACATTTCTTCAGCTGTGCTCACGACGTGTTGAAGGCGTGTAATGCTTACAGAAACGGAGCTACACCGGGATATCTGGTGAAGGGGGCTCCAGATGTGGAAGAGAATAGCGCGGGCATGAGCTCTCTGAAGTTTAGGACAGATGTGGCTACCTTTGTGGAGACAGTGCTGTTGAAAGAGTTTATTCTTCTAGGTGTCCTTGGTCTCGAACCGGAAGAAGAAGAAAAAACACCTGAGACTATAATCGTTGCAGAGAGTAGCAAATGTACCAGATCAAGGTCCAAGAGAGACAGAGTTTCTTCTAGTTGA
Protein Sequence
- >AT3G15355.1
MEPNVVEIATPPAASCSRIRTPTKAETPEVIDVEEYDLQNGGVPNGNNVDYKNKGKAIDFDSMSYGDYGEEDEYAVGSPGDDYGYPESSPLSNSLLDPESLIYEDDENYSEQYDFEMEAEPDNYSMYQDLFDGKDIPTGVEVSMDWFPNSADKESASSSKSSHANNGNNSSKKATKASGIHSQFSSDMETPVAQPWNALPHKAEGVIPNSAYALPQNSKAFQPPYAVHYSALKTAFSNYLQPQTPDTVLGEAPAPAAGSSGLLPPNTPGFKSNAARFKEEPPILPPDDSRVKRNMEDYLGLYLFFKRFDIVEDFSDHHYASKGTTSKQHSKDWAKRIQDEWRILEKDLPEMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSGNQREKWIPNTSTMLQVLVSIQGLILNQKPYFNEPGYERSAGSAHGESTSKAYSENTFILSLKTMVYTMRRPPKYFEDFAYGHFFSCAHDVLKACNAYRNGATPGYLVKGAPDVEENSAGMSSLKFRTDVATFVETVLLKEFILLGVLGLEPEEEEKTPETIIVAESSKCTRSRSKRDRVSSS