Information report for AT3G15190
Gene Details
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Functional Descriptions
- GO:0009570 — located in — chloroplast stroma
- GO:0070181 — enables — small ribosomal subunit rRNA binding
- GO:0015935 — part of — small ribosomal subunit
- GO:0009507 — located in — chloroplast
- GO:0008610 — acts upstream of or within — lipid biosynthetic process
- GO:0009941 — located in — chloroplast envelope
- GO:0003735 — enables — structural constituent of ribosome
- GO:0006412 — involved in — translation
- GO:0003729 — enables — mRNA binding
- GO:0044255 — acts upstream of or within — cellular lipid metabolic process
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins. DOI: 10.1093/molbev/msj080 ; PMID: 16368778
- Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis. DOI: 10.1104/pp.105.070508 ; PMID: 16500996
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Versatile roles of Arabidopsis plastid ribosomal proteins in plant growth and development. DOI: 10.1111/tpj.12000 ; PMID: 22900828
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- CHLOROPLAST RIBOSOME ASSOCIATED Supports Translation under Stress and Interacts with the Ribosomal 30S Subunit. DOI: 10.1104/pp.18.00602 ; PMID: 29914890
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
Gene Resources
- UniProt: A0A178VMN1
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VMN1
- EnsemblPlants: AT3G15190.1
- Gramene: AT3G15190.1
- KEGG: ath:AT3G15190
- Orthologous matrix: CATRVKK
- ExpressionAtlas: AT3G15190
- InterPro: IPR002583, IPR036510
- PANTHER: PTHR33398, PTHR33398:SF1
- SUPFAM: SSF46992
- Gene3D: 1.20.58.110
- OrthoDB: A0A178VMN1
- SWISS-MODEL: A0A178VMN1
Homologs
- Oryza sativa ASL1
- Raphanus raphanistrum RrC3117_p3
Sequences
cDNA Sequence
- >AT3G15190.1
ATTAGCCCACGCGGGAGATCCAAAACACTGGGCTAAACTGGAGTTAAGACGATAAACCAAGGGTAATATAGTAATTGCGTTTCCAGACATCATCTCTTCCTTTATGGATAACACTGGTTCGAAATGGAGCCATTACTCTTTACTAACAGAGGGAGAAAGAGCAGAGAAGAGAGAAGAGGAAGCTTGTAGAAATCGATGGCGACGATAGTGCAGTGTCTTTCTTCCTGTGCGACCCTCGAATCCCAATTCAAAGTCCTTTCGCTTAAGGGAATCTCTTGTTCGTCACCATCTTCTTCCTTCTCCAATCGTCGTGGTGCTTCGGCTACCTTATCCTCTTCCCTTAGCTTCTCTCAGAGCGTTTCTCAATGCGTCGCCTTCTCAACCGGGAATTTGTGGGTACAGAAGCCAATGAGGCAATTGATTGTGTGTGAGGCTGCTGCTCCTACCAAGAAAGCTGATTCAGCTGCAAAGAGAGCTCGCCAAGCTGAGAAGAGGCGTGTTTACAACAAATCTAAGAAATCTGAAGCCCGTACCCGGATGAAGAAGGTCTTGGAAGCACTTGAGGGGCTCAAGAAGAAAACTGATGCGCAAGCTGATGAGATTGTGACGGTGGAGAAACTGATAGGAGAGGCTTATTCTGCAATTGACAAAGCAGTGAAGGTTAAAGCACTACACAAGAACACTGGTGCCCGTAGGAAGTCTCGATTGGCTAGGAGGAAAAAAGCCGTTGAAATTCACCATGGTTGGTACGTCCCAGACGCAGCTGCTGCAGCACCATCAGAAGCTGTGCCCATGGCTGCATAAGAACATGGGGATAACGGAAATTTGTTTTTGTTACTAGATCTTTCAAAATCAAAATCTGTTTCTTTATAATGTACATTTAGTCGCTTTCAGACTCTTCGCTTGTTAAGTTCGATCTAAGCATTTTGTCTTCTACTCTTGGCTTGGTCTTGTTCTGGTTCAGTAACATCTCAGTTCTTGGCTCTGGTACCATTCCTTTTGACATC
CDS Sequence
- >AT3G15190.1
ATGGCGACGATAGTGCAGTGTCTTTCTTCCTGTGCGACCCTCGAATCCCAATTCAAAGTCCTTTCGCTTAAGGGAATCTCTTGTTCGTCACCATCTTCTTCCTTCTCCAATCGTCGTGGTGCTTCGGCTACCTTATCCTCTTCCCTTAGCTTCTCTCAGAGCGTTTCTCAATGCGTCGCCTTCTCAACCGGGAATTTGTGGGTACAGAAGCCAATGAGGCAATTGATTGTGTGTGAGGCTGCTGCTCCTACCAAGAAAGCTGATTCAGCTGCAAAGAGAGCTCGCCAAGCTGAGAAGAGGCGTGTTTACAACAAATCTAAGAAATCTGAAGCCCGTACCCGGATGAAGAAGGTCTTGGAAGCACTTGAGGGGCTCAAGAAGAAAACTGATGCGCAAGCTGATGAGATTGTGACGGTGGAGAAACTGATAGGAGAGGCTTATTCTGCAATTGACAAAGCAGTGAAGGTTAAAGCACTACACAAGAACACTGGTGCCCGTAGGAAGTCTCGATTGGCTAGGAGGAAAAAAGCCGTTGAAATTCACCATGGTTGGTACGTCCCAGACGCAGCTGCTGCAGCACCATCAGAAGCTGTGCCCATGGCTGCATAA
Protein Sequence
- >AT3G15190.1
MATIVQCLSSCATLESQFKVLSLKGISCSSPSSSFSNRRGASATLSSSLSFSQSVSQCVAFSTGNLWVQKPMRQLIVCEAAAPTKKADSAAKRARQAEKRRVYNKSKKSEARTRMKKVLEALEGLKKKTDAQADEIVTVEKLIGEAYSAIDKAVKVKALHKNTGARRKSRLARRKKAVEIHHGWYVPDAAAAAPSEAVPMAA