Information report for AT3G15150
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0019789 — enables — SUMO transferase activity
- GO:0005515 — enables — protein binding
- GO:0010082 — involved in — regulation of root meristem growth
- GO:0006974 — acts upstream of or within — DNA damage response
- GO:0032876 — acts upstream of or within — negative regulation of DNA endoreduplication
- GO:0008284 — involved in — positive regulation of cell population proliferation
- GO:0061665 — enables — SUMO ligase activity
- GO:0005634 — is active in — nucleus
- GO:0080038 — involved in — positive regulation of cytokinin-activated signaling pathway
- GO:0060250 — acts upstream of or within — germ-line stem-cell niche homeostasis
- GO:0030915 — part of — Smc5-Smc6 complex
- GO:0000724 — involved in — double-strand break repair via homologous recombination
- GO:0048509 — acts upstream of or within — regulation of meristem development
- GO:0008270 — enables — zinc ion binding
- GO:0045931 — involved in — positive regulation of mitotic cell cycle
- GO:0005634 — located in — nucleus
- hpy2-1 — premature transition from mitotic cycle to the endocycle; severe dwarfism with defective meristems.
Functional Keywords
Literature and News
- Salicylic acid-mediated innate immunity in Arabidopsis is regulated by SIZ1 SUMO E3 ligase. DOI: 10.1111/j.1365-313X.2006.02947.x ; PMID: 17163880
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The Arabidopsis SUMO E3 ligase AtMMS21, a homologue of NSE2/MMS21, regulates cell proliferation in the root. DOI: 10.1111/j.1365-313X.2009.03992.x ; PMID: 19682286
- SUMO E3 ligase HIGH PLOIDY2 regulates endocycle onset and meristem maintenance in Arabidopsis. DOI: 10.1105/tpc.109.068072 ; PMID: 19666737
- Diversity of the SUMOylation machinery in plants. DOI: 10.1042/BST0380060 ; PMID: 20074036
- SUMO E3 ligase AtMMS21 regulates drought tolerance in Arabidopsis thaliana(F). DOI: 10.1111/jipb.12024 ; PMID: 23231763
- Differential regulation of B2-type CDK accumulation in Arabidopsis roots. DOI: 10.1007/s00299-014-1581-z ; PMID: 24573537
- Transcriptional Gene Silencing Maintained by OTS1 SUMO Protease Requires a DNA-Dependent Polymerase V-Dependent Pathway. DOI: 10.1104/pp.16.01365 ; PMID: 27852949
- A SUMO Ligase AtMMS21 Regulates the Stability of the Chromatin Remodeler BRAHMA in Root Development. DOI: 10.1104/pp.17.00014 ; PMID: 28115583
- AtNSE1 and AtNSE3 are required for embryo pattern formation and maintenance of cell viability during Arabidopsis embryogenesis. DOI: 10.1093/jxb/erz373 ; PMID: 31408172
- Defects in meiotic chromosome segregation lead to unreduced male gametes in Arabidopsis SMC5/6 complex mutants. DOI: 10.1093/plcell/koab178 ; PMID: 34240187
- Structural Maintenance of Chromosomes 5/6 Complex Is Necessary for Tetraploid Genome Stability in Arabidopsis thaliana. DOI: 10.3389/fpls.2021.748252 ; PMID: 34675953
- SUMO E3 ligase AtMMS21-dependent SUMOylation of AUXIN/INDOLE-3-ACETIC ACID 17 regulates auxin signaling. DOI: 10.1093/plphys/kiac553 ; PMID: 36464768
- SMC5/6 complex-mediated SUMOylation stimulates DNA-protein cross-link repair in Arabidopsis. DOI: 10.1093/plcell/koad020 ; PMID: 36705512
- PKL is stabilized by MMS21 to negatively regulate Arabidopsis drought tolerance through directly repressing AFL1 transcription. DOI: 10.1111/nph.18972 ; PMID: 37209253
Gene Resources
- UniProt: A0A178VCB3
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VCB3
- EnsemblPlants: AT3G15150.1
- Gramene: AT3G15150.1
- KEGG: ath:AT3G15150
- Orthologous matrix: VECKHIY
- ExpressionAtlas: AT3G15150
- InterPro: IPR004181, IPR013083, IPR026846
- PANTHER: PTHR21330, PTHR21330:SF1
- SUPFAM: SSF57850
- PROSITE: PS51044
- Gene3D: 3.30.40.10
- OrthoDB: A0A178VCB3
- SWISS-MODEL: A0A178VCB3
- Conserved Domain Database: cd16651
Homologs
- Capsicum annuum CA07g17430
- Nicotiana tabacum XP_016479504.1
- Prunus persica Prupe.4G174000.1.p
- Vitis vinifera GSVIVT01014276001
Sequences
cDNA Sequence
- >AT3G15150.1
CTCACTCTTTCCGTCTTCTGATTTCTCCCTCCAAAACAAACCTCGGAAGAGAAAATTGGAGCGAAGGAGCGATAGATATGGCGTCGGCGTCCTCGTCTGACGGAGTTGCCGGAAGGATTCAGAACGCTTCTTTGGTTCTTGTCTCCGATAACAGTTCCACGCTTGCTGATATCCGCAAAGCTGTGGCAATGATGAAGAACATTGCAGTTCAATTGGAGAAAGAAAATCAAACGGACAAGGTTAAGGACCTTGAAAATTCTGTGGCTGAGTTATTGGATTTGCATAGTGATTGTAATCACCGTTCGACAGCAATTCAATCCGTTGCAAATCGGTACCAACCCGTGGAACAATTAACGGACTTTAAAAAGTTGCTTGATGATGAATTCACAAAGCTCAAGGCTACACCTTCCTCAGTGCCACAAAATGATCATTTGATGCGCCAGTTCAGGGAAGCAGTTTGGAATGTTCATCATGCAGGTGAACCAATGCCTGGTGACGATGATGAGGACATTGTTATGACCAGTACTCAGTGCCCTCTTCTAAACATGACATGTCCCTTGAGCGGGAAGCCTGTCACTGAATTAGCAGATCCAGTTCGCAGTATGGATTGCAGGCACGTCTATGAAAAATCTGTAATCCTGCATTACATAGTCAACAATCCAAATGCGAATTGTCCTGTAGCAGGGTGCCGAGGTAAACTGCAGAATAGCAAAGTGATTTGTGATGCAATGTTGAAGTTTGAAATAGAGGAGATGCGCTCGTTGAACAAACAATCTAATAGGGCTGAAGTGATTGAAGACTTCACAGAAGATGTGGATGAAGATTAGAGATCAGACATTTCTTGGACCGGGTTTTAAGCGCTGCAATGAAACAAGTTGAAGCCATATGTTTCACAACTTTTTGCTATTCTTAGTCCGTTCGGTATATTTTATCAAACGTGAAATTTGATACCAATTGTTTCCACTTTATGGAGGATGTAAATAGTCGATCTCTTCCGATTCTGAATTCAACTGCTGTTTTTTTTGCCAAGTTTACGTTCATTTCCTGAGGCTAGTCAAAGCTTAATTTCATTTCTTGTAGTCAGAATTTTCGATTTAGTACCATTATTAGGTCTACTCGGTTTATTAGTTTTTCATGGTATGGTTTGGCATTGGTTAAGAGTTTGTGTGGATATAAATCCAGTTTGGTTTTCA
CDS Sequence
- >AT3G15150.1
ATGGCGTCGGCGTCCTCGTCTGACGGAGTTGCCGGAAGGATTCAGAACGCTTCTTTGGTTCTTGTCTCCGATAACAGTTCCACGCTTGCTGATATCCGCAAAGCTGTGGCAATGATGAAGAACATTGCAGTTCAATTGGAGAAAGAAAATCAAACGGACAAGGTTAAGGACCTTGAAAATTCTGTGGCTGAGTTATTGGATTTGCATAGTGATTGTAATCACCGTTCGACAGCAATTCAATCCGTTGCAAATCGGTACCAACCCGTGGAACAATTAACGGACTTTAAAAAGTTGCTTGATGATGAATTCACAAAGCTCAAGGCTACACCTTCCTCAGTGCCACAAAATGATCATTTGATGCGCCAGTTCAGGGAAGCAGTTTGGAATGTTCATCATGCAGGTGAACCAATGCCTGGTGACGATGATGAGGACATTGTTATGACCAGTACTCAGTGCCCTCTTCTAAACATGACATGTCCCTTGAGCGGGAAGCCTGTCACTGAATTAGCAGATCCAGTTCGCAGTATGGATTGCAGGCACGTCTATGAAAAATCTGTAATCCTGCATTACATAGTCAACAATCCAAATGCGAATTGTCCTGTAGCAGGGTGCCGAGGTAAACTGCAGAATAGCAAAGTGATTTGTGATGCAATGTTGAAGTTTGAAATAGAGGAGATGCGCTCGTTGAACAAACAATCTAATAGGGCTGAAGTGATTGAAGACTTCACAGAAGATGTGGATGAAGATTAG
Protein Sequence
- >AT3G15150.1
MASASSSDGVAGRIQNASLVLVSDNSSTLADIRKAVAMMKNIAVQLEKENQTDKVKDLENSVAELLDLHSDCNHRSTAIQSVANRYQPVEQLTDFKKLLDDEFTKLKATPSSVPQNDHLMRQFREAVWNVHHAGEPMPGDDDEDIVMTSTQCPLLNMTCPLSGKPVTELADPVRSMDCRHVYEKSVILHYIVNNPNANCPVAGCRGKLQNSKVICDAMLKFEIEEMRSLNKQSNRAEVIEDFTEDVDED