Information report for AT3G15020
Gene Details
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Functional Descriptions
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- mmdh1-2 mmdh2-1 — mmdh1-2 mmdh2-1 double mutants have no detectable mitochondrial malate dehydrogenase (MDH) activity and over a 40% reduction in total leaf MDH activity. They also have growth defects under long and short days.
Functional Keywords
Literature and News
- Genomic and proteomic analysis of mitochondrial carrier proteins in Arabidopsis. DOI: 10.1104/pp.009985 ; PMID: 12586869
- The age of the Arabidopsis thaliana genome duplication. DOI: 10.1023/a:1023001130337 ; PMID: 12777046
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins. DOI: 10.1002/rcm.1376 ; PMID: 15052571
- Untangling multi-gene families in plants by integrating proteomics into functional genomics. DOI: 10.1016/j.phytochem.2004.04.021 ; PMID: 15276449
- Coordination of nuclear and mitochondrial genome expression during mitochondrial biogenesis in Arabidopsis. DOI: 10.1105/tpc.104.030254 ; PMID: 15829605
- Computational identification of 69 retroposons in Arabidopsis. DOI: 10.1104/pp.105.060244 ; PMID: 15923328
- Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry. DOI: 10.1002/pmic.200401282 ; PMID: 16254930
- Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. DOI: 10.1104/pp.106.086231 ; PMID: 17028151
- Alternative and effective proteomic analysis in Arabidopsis. DOI: 10.1002/pmic.200700346 ; PMID: 17828791
- The rules of gene expression in plants: organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana. DOI: 10.1186/1471-2164-9-438 ; PMID: 18811951
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Mitochondrial malate dehydrogenase lowers leaf respiration and alters photorespiration and plant growth in Arabidopsis. DOI: 10.1104/pp.110.161612 ; PMID: 20876337
- Proteomic analyses of apoplastic proteins from germinating Arabidopsis thaliana pollen. DOI: 10.1016/j.bbapap.2011.07.013 ; PMID: 21798377
- The trehalose 6-phosphate/SnRK1 signaling pathway primes growth recovery following relief of sink limitation. DOI: 10.1104/pp.113.220657 ; PMID: 23735508
- Selected reaction monitoring to determine protein abundance in Arabidopsis using the Arabidopsis proteotypic predictor. DOI: 10.1104/pp.113.225524 ; PMID: 24296071
- Plants Possess a Cyclic Mitochondrial Metabolic Pathway similar to the Mammalian Metabolic Repair Mechanism Involving Malate Dehydrogenase and l-2-Hydroxyglutarate Dehydrogenase. DOI: 10.1093/pcp/pcv108 ; PMID: 26203119
- 2-Hydroxy Acids in Plant Metabolism. DOI: 10.1199/tab.0182 ; PMID: 26380567
- Loss of Mitochondrial Malate Dehydrogenase Activity Alters Seed Metabolism Impairing Seed Maturation and Post-Germination Growth in Arabidopsis. DOI: 10.1104/pp.16.01654 ; PMID: 27208265
- Negative regulation of cadmium tolerance in Arabidopsis by MMDH2. DOI: 10.1007/s11103-019-00923-w ; PMID: 31617145
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. DOI: 10.1104/pp.106.086231 ; PMID: 17028151
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. DOI: 10.1104/pp.106.086231 ; PMID: 17028151
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Gene Resources
- UniProt: A0A7G2EQA6
- EMBL: LR881468
- AlphaFoldDB: A0A7G2EQA6
- EnsemblPlants: AT3G15020.1
- Gramene: AT3G15020.1
- KEGG: ath:AT3G15020
- Orthologous matrix: CASTHLL
- ExpressionAtlas: AT3G15020
- InterPro: IPR001236, IPR001252, IPR001557
- PANTHER: PTHR11540, PTHR11540:SF58
- SUPFAM: SSF51735, SSF56327
- PROSITE: PS00068
- Gene3D: 3.40.50.720, 3.90.110.10
- SWISS-MODEL: A0A7G2EQA6
- Conserved Domain Database: cd01337
Sequences
cDNA Sequence
- >AT3G15020.1
GGAATGGAACTGCGACGAAACCATGTAAATAATAATAATAGTGTATTGTTGTTCTTTGGTATATTTTCACACACACTCTCTTCTGTAACTTACAAAAGAATATTCATAATCACGTTTGAATAGCTCTTAGACACAAATGAGTTGGGTTATAAATTAGTAATTAACAATGGCATGTTACAAATTAGACTAACAACATTGTAGCAAATCAAGCCGATTATATTTTATTTAATTAGTAAAAGATTAACACAACAAAAGAAACCTGAAAATAGTTAAGTGGAGGGCCCCATGACCACTAACAAAAACATATAAGCTCTTTTCGTTTTGTTACTCTCTCCATTGAATTCTGTCTTGATCACTTTCGATTCTCTCAAAAAATCCCATAACTTTCCCAACGAAAAATGTTCCGATCAATGATTGTTCGATCTGCTTCCCCAGTGAAGCAGGGTCTTCTCCGCAGAGGATTCGCCTCTGAATCTGTTCCCGATCGCAAAGTCGTCATCCTCGGTGCCGCCGGTGGGATCGGCCAGCCACTTTCTCTTCTCATGAAGCTTAACCCTCTCGTCTCTTCTCTCTCCCTCTATGATATCGCCAACACTCCCGGCGTTGCTGCTGACGTCGGTCACATCAACACCCGATCTCAGGTTTCTGGGTACATGGGTGATGATGATTTGGGGAAAGCTCTAGAAGGCGCTGACCTCGTCATTATTCCAGCTGGTGTCCCAAGGAAGCCTGGCATGACCCGTGATGATCTTTTCAACATCAATGCTGGCATTGTCAAGAACCTCAGCATCGCCATCGCCAAGTATTGCCCACAAGCACTTGTCAACATGATCAGCAACCCTGTGAACTCCACTGTTCCAATTGCAGCTGAGATTTTTAAGAAGGCTGGTACCTATGATGAGAAGAAATTATTCGGTGTCACCACTCTTGATGTTGTCAGGGCTAGGACTTTCTATGCTGGAAAATCGGATGTCAATGTTGCAGAGGTTAATGTTCCAGTTGTTGGTGGTCATGCTGGCATCACGATTCTTCCTCTCTTTTCTCAGGCTAGCCCTCAAGCCAACTTGTCGGATGATTTAATCAGGGCCCTCACAAAGCGTACCCAGGACGGAGGGACAGAAGTCGTGGAGGCAAAAGCTGGAAAGGGTTCAGCTACATTGTCAATGGCCTATGCGGGAGCACTCTTTGCTGATGCATGCTTAAAGGGACTCAACGGTGTTCCAAATGTGGTGGAATGCTCATTCGTCCAATCTACCATCACCGAGCTTCCTTTCTTCGCCTCAAAGGTAAGACTGGGAAAGAACGGAGTGGAGGAAGTGCTAGATCTAGGGCCACTCTCAGACTTTGAAAAGGAAGGCTTAGAAGCCCTCAAGGCAGAACTCAAATCCTCTATCGAGAAGGGCATCAAATTTGCCAACCAATGAGTTTTTGCATCTTGAAACTATTGATTTTGGACTAAACTTTAGGTTAATGTTTGTCTTTCCAATTTTCCGGTAGAGTTGTCTTCTTCCTCTGCGGATTTTATAATTTCCCTTCAATAAATTCTCCATTTCTGCTCTTGAGGAACCAACCATTGGGAACTCTGTAATAAAAAGAACAAGCTGTTGTGCTGCTATGTTGGTTATGATTCGTTTTCCTTTTTCCTTATTGTTTGCTAGAAAAAAGAAAGAAAATAATAAATCGTTGTGAGTTGCATTATTTGGGCAACTACTACTACTATTCATAAGTTGCA - >AT3G15020.2
GGAATGGAACTGCGACGAAACCATGTAAATAATAATAATAGTGTATTGTTGTTCTTTGGTATATTTTCACACACACTCTCTTCTGTAACTTACAAAAGAATATTCATAATCACGTTTGAATAGCTCTTAGACACAAATGAGTTGGGTTATAAATTAGTAATTAACAATGGCATGTTACAAATTAGACTAACAACATTGTAGCAAATCAAGCCGATTATATTTTATTTAATTAGTAAAAGATTAACACAACAAAAGAAACCTGAAAATAGTTAAGTGGAGGGCCCCATGACCACTAACAAAAACATATAAGCTCTTTTCGTTTTGTTACTCTCTCCATTGAATTCTGTCTTGATCACTTTCGATTCTCTCAAAAAATCCCATAACTTTCCCAACGAAAAATGTTCCGATCAATGATTGTTCGATCTGCTTCCCCAGTGAAGCAGGGTCTTCTCCGCAGAGGATTCGCCTCTGAATCTGTTCCCGATCGCAAAGTCGTCATCCTCGGTGCCGCCGGTGGGATCGGCCAGCCACTTTCTCTTCTCATGAAGCTTAACCCTCTCGTCTCTTCTCTCTCCCTCTATGATATCGCCAACACTCCCGGCGTTGCTGCTGACGTCGGTCACATCAACACCCGATCTCAGGTTTCTGGGTACATGGGTGATGATGATTTGGGGAAAGCTCTAGAAGGCGCTGACCTCGTCATTATTCCAGCTGGTGTCCCAAGGAAGCCTGGCATGACCCGTGATGATCTTTTCAACATCAATGCTGGCATTGTCAAGAACCTCAGCATCGCCATCGCCAAGTATTGCCCACAAGCACTTGTCAACATGATCAGCAACCCTGTGAACTCCACTGTTCCAATTGCAGCTGAGATTTTTAAGAAGGCTGGTACCTATGATGAGAAGAAATTATTCGGTGTCACCACTCTTGATGTTGTCAGGGCTAGGACTTTCTATGCTGGAAAATCGGATGTCAATGTTGCAGAGGTTAATGTTCCAGTTGTTGGTGGTCATGCTGGCATCACGATTCTTCCTCTCTTTTCTCAGGCTAGCCCTCAAGCCAACTTGTCGGATGATTTAATCAGGGCCCTCACAAAGCGTACCCAGGACGGAGGGACAGAAGTCGTGGAGGCAAAAGCTGGAAAGGGTTCAGCTACATTGTCAATGGCCTATGCGGGAGCACTCTTTGCTGATGCATGCTTAAAGGGACTCAACGGTGTTCCAAATGTGGTGGAATGCTCATTCGTCCAATCTACCATCACCGAGCTTCCTTTCTTCGCCTCAAAGGTAAGACTGGGAAAGAACGGAGTGGAGGAAGTGCTAGATCTAGGGCCACTCTCAGACTTTGAAAAGGAAGGCTTAGAAGCCCTCAAGGCAGAACTCAAATCCTCTATCGAGAAGGGCATCAAATTTGCCAACCAATGAGTTTTTGCATCTTGAAACTATTGATTTTGGACTAAACTTTAGGTTAATGTTTGTCTTTCCAATTTTCCGGTAGAGTTGTCTTCTTCCTCTGCGGATTTTATAATTTCCCTTCAATAAATTCTCCATTTCTGCTCTTGAGGAACCAACCATTGGGAACTCTGTAATAAAAAGAACAAGCTGTTGTGCTGCTATGTTGGTTATGATTCGTTTTCCTTTTTCCTTATTGTTTGCTAGAAAAAAGAAAGAAAATAATAAATCGTTGTGAGTTGCATTATTTGGGCAACTACTACTACTATTCATAAGTTGCA
CDS Sequence
- >AT3G15020.1
ATGTTCCGATCAATGATTGTTCGATCTGCTTCCCCAGTGAAGCAGGGTCTTCTCCGCAGAGGATTCGCCTCTGAATCTGTTCCCGATCGCAAAGTCGTCATCCTCGGTGCCGCCGGTGGGATCGGCCAGCCACTTTCTCTTCTCATGAAGCTTAACCCTCTCGTCTCTTCTCTCTCCCTCTATGATATCGCCAACACTCCCGGCGTTGCTGCTGACGTCGGTCACATCAACACCCGATCTCAGGTTTCTGGGTACATGGGTGATGATGATTTGGGGAAAGCTCTAGAAGGCGCTGACCTCGTCATTATTCCAGCTGGTGTCCCAAGGAAGCCTGGCATGACCCGTGATGATCTTTTCAACATCAATGCTGGCATTGTCAAGAACCTCAGCATCGCCATCGCCAAGTATTGCCCACAAGCACTTGTCAACATGATCAGCAACCCTGTGAACTCCACTGTTCCAATTGCAGCTGAGATTTTTAAGAAGGCTGGTACCTATGATGAGAAGAAATTATTCGGTGTCACCACTCTTGATGTTGTCAGGGCTAGGACTTTCTATGCTGGAAAATCGGATGTCAATGTTGCAGAGGTTAATGTTCCAGTTGTTGGTGGTCATGCTGGCATCACGATTCTTCCTCTCTTTTCTCAGGCTAGCCCTCAAGCCAACTTGTCGGATGATTTAATCAGGGCCCTCACAAAGCGTACCCAGGACGGAGGGACAGAAGTCGTGGAGGCAAAAGCTGGAAAGGGTTCAGCTACATTGTCAATGGCCTATGCGGGAGCACTCTTTGCTGATGCATGCTTAAAGGGACTCAACGGTGTTCCAAATGTGGTGGAATGCTCATTCGTCCAATCTACCATCACCGAGCTTCCTTTCTTCGCCTCAAAGGTAAGACTGGGAAAGAACGGAGTGGAGGAAGTGCTAGATCTAGGGCCACTCTCAGACTTTGAAAAGGAAGGCTTAGAAGCCCTCAAGGCAGAACTCAAATCCTCTATCGAGAAGGGCATCAAATTTGCCAACCAATGA - >AT3G15020.2
ATGTTCCGATCAATGATTGTTCGATCTGCTTCCCCAGTGAAGCAGGGTCTTCTCCGCAGAGGATTCGCCTCTGAATCTGTTCCCGATCGCAAAGTCGTCATCCTCGGTGCCGCCGGTGGGATCGGCCAGCCACTTTCTCTTCTCATGAAGCTTAACCCTCTCGTCTCTTCTCTCTCCCTCTATGATATCGCCAACACTCCCGGCGTTGCTGCTGACGTCGGTCACATCAACACCCGATCTCAGGTTTCTGGGTACATGGGTGATGATGATTTGGGGAAAGCTCTAGAAGGCGCTGACCTCGTCATTATTCCAGCTGGTGTCCCAAGGAAGCCTGGCATGACCCGTGATGATCTTTTCAACATCAATGCTGGCATTGTCAAGAACCTCAGCATCGCCATCGCCAAGTATTGCCCACAAGCACTTGTCAACATGATCAGCAACCCTGTGAACTCCACTGTTCCAATTGCAGCTGAGATTTTTAAGAAGGCTGGTACCTATGATGAGAAGAAATTATTCGGTGTCACCACTCTTGATGTTGTCAGGGCTAGGACTTTCTATGCTGGAAAATCGGATGTCAATGTTGCAGAGGTTAATGTTCCAGTTGTTGGTGGTCATGCTGGCATCACGATTCTTCCTCTCTTTTCTCAGGCTAGCCCTCAAGCCAACTTGTCGGATGATTTAATCAGGGCCCTCACAAAGCGTACCCAGGACGGAGGGACAGAAGTCGTGGAGGCAAAAGCTGGAAAGGGTTCAGCTACATTGTCAATGGCCTATGCGGGAGCACTCTTTGCTGATGCATGCTTAAAGGGACTCAACGGTGTTCCAAATGTGGTGGAATGCTCATTCGTCCAATCTACCATCACCGAGCTTCCTTTCTTCGCCTCAAAGGTAAGACTGGGAAAGAACGGAGTGGAGGAAGTGCTAGATCTAGGGCCACTCTCAGACTTTGAAAAGGAAGGCTTAGAAGCCCTCAAGGCAGAACTCAAATCCTCTATCGAGAAGGGCATCAAATTTGCCAACCAATGA
Protein Sequence
- >AT3G15020.1
MFRSMIVRSASPVKQGLLRRGFASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMISNPVNSTVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKSSIEKGIKFANQ - >AT3G15020.2
MFRSMIVRSASPVKQGLLRRGFASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMISNPVNSTVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITILPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKGLNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKSSIEKGIKFANQ