Information report for AT3G15000
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- Proteomic approach to identify novel mitochondrial proteins in Arabidopsis. DOI: 6987 ; PMID: 11743114
- Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome. DOI: 10.1105/tpc.010009 ; PMID: 12837951
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Identification of plant glutaredoxin targets. DOI: 10.1089/ars.2005.7.919 ; PMID: 15998247
- Stable isotope labeling of Arabidopsis thaliana cells and quantitative proteomics by mass spectrometry. DOI: 10.1074/mcp.M500190-MCP200 ; PMID: 16088002
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Comprehensive high-resolution analysis of the role of an Arabidopsis gene family in RNA editing. DOI: 10.1371/journal.pgen.1003584 ; PMID: 23818871
- Tetrapyrrole biosynthetic enzyme protoporphyrinogen IX oxidase 1 is required for plastid RNA editing. DOI: 10.1073/pnas.1316183111 ; PMID: 24497494
- and heteromer interactions between the multiple organellar RNA editing factor (MORF) proteins in Arabidopsis thaliana. DOI: 10.1074/jbc.M114.602086 ; PMID: 25583991
- Two RNA recognition motif-containing proteins are plant mitochondrial editing factors. DOI: 10.1093/nar/gkv245 ; PMID: 25800738
- MEF13 Requires MORF3 and MORF8 for RNA Editing at Eight Targets in Mitochondrial mRNAs in Arabidopsis thaliana. DOI: 10.1016/j.molp.2015.05.008 ; PMID: 26048647
- PPR protein PDM1/SEL1 is involved in RNA editing and splicing of plastid genes in Arabidopsis thaliana. DOI: 10.1007/s11120-015-0171-4 ; PMID: 26123918
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- RNA Recognition Motif-Containing Protein ORRM4 Broadly Affects Mitochondrial RNA Editing and Impacts Plant Development and Flowering. DOI: 10.1104/pp.15.01280 ; PMID: 26578708
- An Organelle RNA Recognition Motif Protein Is Required for Photosystem II Subunit psbF Transcript Editing. DOI: 10.1104/pp.16.01623 ; PMID: 28213559
- RNA editing of cytochrome c maturation transcripts is responsive to the energy status of leaf cells in Arabidopsis thaliana. DOI: 10.1016/j.mito.2017.04.006 ; PMID: 28478183
- Porphobilinogen deaminase HEMC interacts with the PPR-protein AtECB2 for chloroplast RNA editing. DOI: 10.1111/tpj.13672 ; PMID: 28850756
- A novel tetratricopeptide repeat protein, WHITE TO GREEN1, is required for early chloroplast development and affects RNA editing in chloroplasts. DOI: 10.1093/jxb/erx383 ; PMID: 29140512
- Stable native RIP9 complexes associate with C-to-U RNA editing activity, PPRs, RIPs, OZ1, ORRM1 and ISE2. DOI: 10.1111/tpj.14384 ; PMID: 31077462
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Mitochondrial Transcription Termination Factor 27 Is Required for Salt Tolerance in Arabidopsis thaliana. DOI: 10.3390/ijms22031466 ; PMID: 33540552
- GRP23 plays a core role in E-type editosomes via interacting with MORFs and atypical PPR-DYWs in Arabidopsis mitochondria. DOI: 10.1073/pnas.2210978119 ; PMID: 36122211
- DELAYED GREENING 409 encodes a dual-localized pentatricopeptide repeat protein required for chloroplast and mitochondrial development. DOI: 10.1093/plphys/kiad258 ; PMID: 37096684
- Proteomic approach to identify novel mitochondrial proteins in Arabidopsis. DOI: 6987 ; PMID: 11743114
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. DOI: 10.1016/j.phytochem.2004.03.028 ; PMID: 15276431
Gene Resources
- UniProt: A0A5S9XCS9
- EMBL: CACSHJ010000089
- AlphaFoldDB: A0A5S9XCS9
- EnsemblPlants: AT3G15000.1
- Gramene: AT3G15000.1
- KEGG: ath:AT3G15000
- Orthologous matrix: HAGGMQQ
- ExpressionAtlas: AT3G15000
- InterPro: IPR039206, IPR054059
- PANTHER: PTHR31346, PTHR31346:SF4
- OrthoDB: A0A5S9XCS9
- SWISS-MODEL: A0A5S9XCS9
Homologs
- Oryza sativa WSP1
Sequences
cDNA Sequence
- >AT3G15000.1
ACCTAAAATGCCCTCGACTCATAATCTACTATTAAACCCTCATAAAACCCTTGATTTCATTTCTAGCTCATCTGTTTTCACACTCTCTCCTAGGGTTTTATCTGCGAAGCCCAATCTAGAGCTTCCATGGCGACGCATACCATTTCTCGATCCATTCTTTGCCGACCGGCGAAATCTCTTTCGTTTCTGTTCACGCGATCCTTTGCTTCATCTGCTCCTCTCGCCAAATCTCCGGCGTCTTCTCTGCTCAGCCGGTCCCGTCCTCTGGTCGCCGCTTTTTCCTCCGTTTTCCGTGGCGGCCTTGTGTCTGTCAAAGGTCTCTCGACGCAGGCTACATCGTCTTCTCTGAACGACCCGAATCCCAACTGGTCGAACAGGCCACCTAAGGAGACGATCCTGCTCGATGGTTGCGATTTCGAGCACTGGCTTGTCGTCGTGGAGCCACCTCAGGGTGAGCCTACTAGAGATGAAATCATTGATAGCTACATCAAAACCCTAGCTCAGATTGTTGGCAGTGAAGACGAAGCTAGGATGAAGATCTACTCGGTTTCAACTAGGTGCTACTATGCTTTTGGGGCACTTGTGTCAGAAGATCTTTCTCACAAGTTAAAAGAGTTGTCAAATGTGCGCTGGGTTCTTCCTGACTCTTACCTGGATGTGAGGAACAAAGACTATGGAGGGGAACCTTTCATCGATGGGAAGGCTGTTCCTTATGATCCTAAGTACCACGAGGAGTGGATAAGGAACAATGCTAGAGCAAATGAAAGGAACAGACGCAATGACCGTCCTCGCAACAATGATAGAAGCAGAAACTTTGAGAGGAGAAGAGAGAACATGGCAGGAGGCCCTCCTCCTCAACGTCCTCCCATGGGAGGCCCTCCTCCTCCTCCGCACATCGGTGGCTCTGCACCTCCTCCGCCTCATATGGGTGGCTCTGCACCTCCTCCACCTCACATGGGGCAGAACTATGGACCACCACCACCAAACAACATGGGAGGACCAAGGCATCCACCACCTTATGGAGCACCACCGCAAAACAACATGGGAGGACCGAGGCCACCTCAGAACTATGGAGGAACACCACCTCCCAACTATGGAGGAGCACCACCAGCAAACAACATGGGAGGAGCACCACCACCAAACTATGGAGGAGGACCACCACCTCAATATGGAGCAGTACCACCACCTCAATACGGAGGAGCACCCCCACAGAACAACAACTACCAGCAGCAGGGTAGTGGAATGCAGCAGCCACAGTACCAGAACAACTACCCACCTAACCGGGATGGCAGTGGCAACCCCTACCAGGGTTAAAGCAGTTGAAGCAGTCGTGGGTTTCCTTTTTAATCATGCATTCTGGGCTGTGTATAGATAATTTGAGGAAGAGAGAGTGCAGTAGCAAGACTTTAAAACTCCTTTTATCTCGAGTGTTTATCAGTCTGGGATTATGTGAGAGAGAATAGCCTAAGTTACTGTGGCATGGTTAGAACTTTTCACTCTTGCGTTTCTTTTTAGTAGTTTATATCCTAAATCGATCTCAAGTTCTTCCTTGTGATGCTTGCTACTCTTATGTCCACTCCTGGTTCTGCATTAAACGGGATTTAGTAACATGTCTCCCACAGGCTATTGTTTTGTGTCTTTCTTTGGC
CDS Sequence
- >AT3G15000.1
ATGGCGACGCATACCATTTCTCGATCCATTCTTTGCCGACCGGCGAAATCTCTTTCGTTTCTGTTCACGCGATCCTTTGCTTCATCTGCTCCTCTCGCCAAATCTCCGGCGTCTTCTCTGCTCAGCCGGTCCCGTCCTCTGGTCGCCGCTTTTTCCTCCGTTTTCCGTGGCGGCCTTGTGTCTGTCAAAGGTCTCTCGACGCAGGCTACATCGTCTTCTCTGAACGACCCGAATCCCAACTGGTCGAACAGGCCACCTAAGGAGACGATCCTGCTCGATGGTTGCGATTTCGAGCACTGGCTTGTCGTCGTGGAGCCACCTCAGGGTGAGCCTACTAGAGATGAAATCATTGATAGCTACATCAAAACCCTAGCTCAGATTGTTGGCAGTGAAGACGAAGCTAGGATGAAGATCTACTCGGTTTCAACTAGGTGCTACTATGCTTTTGGGGCACTTGTGTCAGAAGATCTTTCTCACAAGTTAAAAGAGTTGTCAAATGTGCGCTGGGTTCTTCCTGACTCTTACCTGGATGTGAGGAACAAAGACTATGGAGGGGAACCTTTCATCGATGGGAAGGCTGTTCCTTATGATCCTAAGTACCACGAGGAGTGGATAAGGAACAATGCTAGAGCAAATGAAAGGAACAGACGCAATGACCGTCCTCGCAACAATGATAGAAGCAGAAACTTTGAGAGGAGAAGAGAGAACATGGCAGGAGGCCCTCCTCCTCAACGTCCTCCCATGGGAGGCCCTCCTCCTCCTCCGCACATCGGTGGCTCTGCACCTCCTCCGCCTCATATGGGTGGCTCTGCACCTCCTCCACCTCACATGGGGCAGAACTATGGACCACCACCACCAAACAACATGGGAGGACCAAGGCATCCACCACCTTATGGAGCACCACCGCAAAACAACATGGGAGGACCGAGGCCACCTCAGAACTATGGAGGAACACCACCTCCCAACTATGGAGGAGCACCACCAGCAAACAACATGGGAGGAGCACCACCACCAAACTATGGAGGAGGACCACCACCTCAATATGGAGCAGTACCACCACCTCAATACGGAGGAGCACCCCCACAGAACAACAACTACCAGCAGCAGGGTAGTGGAATGCAGCAGCCACAGTACCAGAACAACTACCCACCTAACCGGGATGGCAGTGGCAACCCCTACCAGGGTTAA
Protein Sequence
- >AT3G15000.1
MATHTISRSILCRPAKSLSFLFTRSFASSAPLAKSPASSLLSRSRPLVAAFSSVFRGGLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQRPPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGGPRPPQNYGGTPPPNYGGAPPANNMGGAPPPNYGGGPPPQYGAVPPPQYGGAPPQNNNYQQQGSGMQQPQYQNNYPPNRDGSGNPYQG