Gene Details:

• Gene ID: AT3G13540
• Gene Symbol: ATMYB5, MYB5
• Gene Name: myb domain protein 5, myb domain protein 5
• Description: myb domain protein 5;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G13540.1

Plant Ontology Annotations:

• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0000282  — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
• PO:0009089  — endosperm — albumen (exact), endosperma (Spanish, exact), 内胚乳、胚乳 (Japanese, exact)
• PO:0020021  — plant ovule integument — integumento (Spanish, exact), portion of integument tissue (exact), 珠皮 (Japanese, exact), Poaceae integument (narrow), Zea integument (narrow)
• PO:0020108  — suspensor — suspensor (Spanish, exact), 胚柄 (Japanese, exact)

Germplasm Phenotype:

• CS2106725  — Seed mucilage defects.
• CS2106726  — Seed mucilage defects.
• myb5-1  — Reduced seed coat mucilage. Irregularly shaped seed coat epidermal cells.
• myb5-1/myb23-1  — Trichomes are extremely reduced in size and have fewer branches. Also, fewer trichomes form along the margins of leaves.

Function-related keywords:

• plant embryo ,  trichome ,  plant embryo ,  endosperm ,  plant ovule integument ,  suspensor

Literature:

• Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana.   DOI:  10.1046/j.1365-313x.1998.00278.x ;  PMID:  9839469
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The R2R3-MYB gene family in Arabidopsis thaliana.   DOI:  10.1016/s1369-5266(00)00199-0 ;  PMID:  11597504
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103
• Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106.   DOI:  10.1104/pp.108.126979 ;  PMID:  18805951
• TTG1 complex MYBs, MYB5 and TT2, control outer seed coat differentiation.   DOI:  10.1016/j.ydbio.2008.10.005 ;  PMID:  18992236
• The Arabidopsis MYB5 transcription factor regulates mucilage synthesis, seed coat development, and trichome morphogenesis.   DOI:  10.1105/tpc.108.063503 ;  PMID:  19136646
• Expression of PRX36, PMEI6 and SBT1.7 is controlled by complex transcription factor regulatory networks for proper seed coat mucilage extrusion.   DOI:  10.4161/15592324.2014.977734 ;  PMID:  25531128
• Starting to gel: how Arabidopsis seed coat epidermal cells produce specialized secondary cell walls.   DOI:  10.3390/ijms16023452 ;  PMID:  25658798
• Insights into the role of transcription factors controlling mucilage production in the Arabidopsis seed coat.   DOI:  10.1016/j.plantsci.2018.04.021 ;  PMID:  29807590
• MYB-bHLH-TTG1 Regulates Arabidopsis Seed Coat Biosynthesis Pathways Directly and Indirectly via Multiple Tiers of Transcription Factors.   DOI:  10.1093/pcp/pcaa027 ;  PMID:  32154880
• AtMIF1 increases seed oil content by attenuating GL2 inhibition.   DOI:  10.1111/nph.17016 ;  PMID:  33098089
• The Seed Development Factors TT2 and MYB5 Regulate Heat Stress Response in Arabidopsis.   DOI:  10.3390/genes12050746 ;  PMID:  34063415
• Genetic variation in MYB5_A12 is associated with fibre initiation and elongation in tetraploid cotton.   DOI:  10.1111/pbi.13662 ;  PMID:  34245658
• The Arabidopsis MYB5 transcription factor interacts with CASEIN KINASE2 BETA3 subunit in a yeast two-hybrid system.   DOI:  10.17912/micropub.biology.000486 ;  PMID:  34723145
• Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana.   DOI:  10.1046/j.1365-313x.1998.00278.x ;  PMID:  9839469
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The Arabidopsis MYB5 transcription factor regulates mucilage synthesis, seed coat development, and trichome morphogenesis.   DOI:  10.1105/tpc.108.063503 ;  PMID:  19136646

Sequences: