Gene Details:
- Gene ID: AT3G13520
- Gene Symbol: AGP12, ATAGP12
- Gene Name: arabinogalactan protein 12
- Description: arabinogalactan protein 12;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. DOI: 10.1104/pp.003459 ; PMID: 12177459
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Post-translational modifications of arabinogalactan-peptides of Arabidopsis thaliana. Endoplasmic reticulum and glycosylphosphatidylinositol-anchor signal cleavage sites and hydroxylation of proline. DOI: 10.1074/jbc.M407594200 ; PMID: 15322080
- Organ-specific expression of Arabidopsis genome during development. DOI: 10.1104/pp.104.054783 ; PMID: 15888681
- Arabinogalactan proteins are required for apical cell extension in the moss Physcomitrella patens. DOI: 10.1105/tpc.105.034413 ; PMID: 16199618
- AtFLA11, a fasciclin-like arabinogalactan-protein, specifically localized in sclerenchyma cells. DOI: 10.1271/bbb.69.1963 ; PMID: 16244449
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Differential expression patterns of arabinogalactan proteins in Arabidopsis thaliana reproductive tissues. DOI: 10.1093/jxb/eru300 ; PMID: 25053647
- The classical arabinogalactan protein gene family of arabidopsis. DOI: 10.1105/tpc.12.9.1751 ; PMID: 11006345
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
Sequences:
cDNA Sequence
- >AT3G13520.1
ATTTTATAGAGACGTCTCTGGAAAAAACATTCCCAAAATTGGCTTATAAATACTTTCAAAACCACAAGGCCACAACTCATCATTCGCACCAAAGAGAAGAACAAAACATCATCATATATTCTATTGACTAGATTAATTTCTTCTAAGTGCAAAAGAGGAGAAATGGAGTCAATGAAGATGAAGCTCATAGTGGTGTTGATGGTGGCTATTGTGGCTTTCTCCGCCGTAGGAAACGTGGCTGCGCAGACAGAGGCTCCGGCTCCAAGTCCTACTTCCGATGCTGCTATGTTTGTCCCGGCATTGTTTGCATCTGTTGCTGCTTTGGCATCAGGGTTTCTCTTCTAAACCAATCTCCACATTTCATTGAGTTAGGTTCTAAATTGTTTTGCCTTTTACTTTCGTTTATGTCTTATGGCATGAGCTTTTTGTTATTTGTTTCTAATATTTGGACTACTATGTGTTGTGTGTATATGATTCATAATTAATACTATATTTATGGATTGATTTCTTTCTATCAATGTTTTTCCGAGTCTTGGTTAATCTACAGTAACCATAAGAAAAACATCACATGCAAGATATCTAATCTAAGTCCACACAAACGATGTAAACCTCACATCTTCGAGGGGTATGATCAATGATGCGATGAGCTGTGAAATTTTGGAAGGTTGTGATATCTTTGAAAGATGTGTGGTAATTATCATGATGATGATGCTATGGCTTCGAGATTTTCTCAATAAAATTCTAGTGAAACTACTTTTCACTAAAAATAAAACAAATAAAAGTAAAACTGTGGGCACAACAATAAAGCTC
CDS Sequence
- >AT3G13520.1
ATGGAGTCAATGAAGATGAAGCTCATAGTGGTGTTGATGGTGGCTATTGTGGCTTTCTCCGCCGTAGGAAACGTGGCTGCGCAGACAGAGGCTCCGGCTCCAAGTCCTACTTCCGATGCTGCTATGTTTGTCCCGGCATTGTTTGCATCTGTTGCTGCTTTGGCATCAGGGTTTCTCTTCTAA
Protein Sequence
- >AT3G13520.1
MESMKMKLIVVLMVAIVAFSAVGNVAAQTEAPAPSPTSDAAMFVPALFASVAALASGFLF