Information report for AT3G13470
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The Arabidopsis ppi1 mutant is specifically defective in the expression, chloroplast import, and accumulation of photosynthetic proteins. DOI: 10.1105/tpc.012955 ; PMID: 12897258
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- A transcriptomic and proteomic characterization of the Arabidopsis mitochondrial protein import apparatus and its response to mitochondrial dysfunction. DOI: 10.1104/pp.103.033910 ; PMID: 14730085
- Target proteins of the cytosolic thioredoxins in Arabidopsis thaliana. DOI: 10.1093/pcp/pch019 ; PMID: 14749482
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors. DOI: 10.1105/tpc.104.023309 ; PMID: 15273297
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Downregulation of ClpR2 leads to reduced accumulation of the ClpPRS protease complex and defects in chloroplast biogenesis in Arabidopsis. DOI: 10.1105/tpc.106.042861 ; PMID: 16766689
- A heat-inducible transcription factor, HsfA2, is required for extension of acquired thermotolerance in Arabidopsis. DOI: 10.1104/pp.106.091322 ; PMID: 17085506
- Alternative and effective proteomic analysis in Arabidopsis. DOI: 10.1002/pmic.200700346 ; PMID: 17828791
- Proteomics studies of brassinosteroid signal transduction using prefractionation and two-dimensional DIGE. DOI: 10.1074/mcp.M700358-MCP200 ; PMID: 18182375
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Chloroplast signaling and LESION SIMULATING DISEASE1 regulate crosstalk between light acclimation and immunity in Arabidopsis. DOI: 10.1105/tpc.108.059618 ; PMID: 18790826
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- A chaperonin subunit with unique structures is essential for folding of a specific substrate. DOI: 10.1371/journal.pbio.1001040 ; PMID: 21483722
- A proteomic analysis of Arabidopsis thaliana seedling responses to 3-oxo-octanoyl-homoserine lactone, a bacterial quorum-sensing signal. DOI: 10.1016/j.bbrc.2012.09.044 ; PMID: 22995300
- Functional divergence of chloroplast Cpn60α subunits during Arabidopsis embryo development. DOI: 10.1371/journal.pgen.1007036 ; PMID: 28961247
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A654F8G7
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F8G7
- ExpressionAtlas: AT3G13470
- InterPro: IPR001844, IPR002423, IPR018370
- PANTHER: PTHR45633
- SUPFAM: SSF48592, SSF52029, SSF54849
- PROSITE: PS00296
- Gene3D: 1.10.560.10, 3.30.260.10, 3.50.7.10
- Conserved Domain Database: cd03344
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.63KFKN
- Brassica napus GSBRNA2T00145846001
- Daucus carota DCAR_026693
- Oryza sativa OsCpn60beta1, OsCPn60alpha1;OsCPn60a1, TCD9
- Zea mays GRMZM2G156333
Sequences
cDNA Sequence
- >AT3G13470.1
GGCTCATATCGCCTTTATATTCAAAGAAAAAATTATCAGTAGCAAGTGCATTCTTCATTTCGTCATTGGAGAAACCTACTTCTTCCTCCTTATCCGGAATAAACCTCTTCGGCGCCATCTCTCTCCTCACCTCCGTCGTTCCACCGTCCGTGTTTGAGAAGTGAAAATGGCATCGACATTCACTGCCACGTCTTCCCTTGGTTCGTTGCTTGCTCCCAATGCTATCAAGTTGTCTTCTGCGACTAGCATCTCTTCAAGCTCGTTTGGAAGGAGACATAACGTGTGCGTCAGAAGATCCCGTCCTGCCATAGTATGTGCAGCCAAGGAGTTGCATTTCAATAAGGATGGGACTACCATAAGGAAACTTCAGACTGGTGTTAACAAGCTCGCGGACCTTGTTGGTGTCACACTTGGACCAAAAGGGAGAAATGTTGTTCTTGAGAGCAAGTATGGATCCCCAAGAATTGTTAATGATGGTGTCACTGTTGCGAGGGAGGTCGAGTTGGAGGACCCGGTTGAGAACATTGGTGCAAAGCTTGTAAGGCAAGCAGCTGCAAAGACCAATGACTTGGCTGGTGACGGTACAACAACATCTGTTGTTCTTGCACAAGGTTTTATTGCTGAGGGTGTCAAGGTGGTGGCTGCAGGTGCGAACCCTGTATTGATCACTAGGGGGATTGAGAAGACTGCAAAGGCTTTGGTTAACGAGCTGAAACTTATGTCTAAGGAGGTTGAAGACAGTGAACTTGCTGATGTGGCAGCTGTTAGTGCGGGTAATAACCACGAAGTTGGAAGTATGATTGCTGAAGCAATGAGCAAAGTGGGCAGGAAGGGTGTGGTGACCCTGGAGGAGGGAAAAAGCGCTGAGAACAACCTTTATGTTGTGGAAGGAATGCAATTTGACCGTGGTTATATCTCCCCATACTTTGTGACAGACAGTGAGAAAATGTCTGTTGAGTATGACAATTGCAAGTTGCTTCTTGTTGACAAGAAAGTAACCAATGCAAGGGATCTTGTTGGGGTTCTAGAGGATGCGATTAGAGGCGGATACCCAATCCTCATAATTGCAGAAGATATTGAACAAGAAGCCTTAGCTACTCTTGTTGTTAACAAGCTTAGAGGCACACTGAAGATTGCAGCTCTCAAAGCTCCTGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGCCATTCTAACTGGAGCAACTGTGATCAGAGAGGAAGTTGGTCTTTCTCTTGACAAAGCTGGAAAAGAGGTTCTGGGTAACGCTTCCAAGGTTGTCCTGACAAAGGAAATGACAACAATTGTGGGTGATGGGACCACACAAGAAGCAGTGAACAAGCGTGTTGTACAGATTAGGAATCTTATTGAGCAAGCGGAGCAAGACTACGAGAAGGAAAAATTAAATGAGAGAATTGCGAAGCTCTCTGGTGGAGTTGCTGTAATTCAGGTTGGAGCTCAAACTGAGACAGAGCTCAAAGAAAAGAAGCTGAGAGTGGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAAGGTATTGTCGTTGGTGGTGGTTGCACTCTGCTCCGGCTTGCATCAAAGGTCGATGCCATCAAGGATACCCTTGAAAATGATGAAGAAAAGGTTGGAGCGGAAATTGTTAAAAGAGCACTGAGTTACCCTCTGAAATTGATAGCTAAGAATGCTGGTGTTAATGGAAGTGTTGTCAGCGAGAAGGTGCTGGCTAACGATAATGTGAAATTTGGATACAATGCTGCAACCGGCAAGTATGAAGACCTGATGGCTGCAGGCATCATCGACCCGACAAAGGTTGTGAGATGTTGCTTAGAACATGCCGCCTCAGTTGCAAAGACGTTCTTGATGTCTGACTGTGTGGTTGTTGAGATCCCAGAGCCAGAGCCAGTTCCTGCTGGTAACCCAATGGACAACTCAGGTTATGGATACTAAGATAGACCGACCAGGTTTGCTCGTAAAGCTGAGAGATAGGCAAAATTCCGAAGCGAGAGTAGCTCACTGGGATACGGATTCCTTTAGCTTGCAAACAAATTTTCTGTGCAAGTGTAGTGATTTTTGAACCAGAGAATAATGTGTTCACTAGATATCATATTTGAAATCATTTTGAATAACTTGTCAGTGATCTTCAAAATCTTGAGTGCTCTTAATAACACCATCTTATATACATGCTAAAGCTGAGGGAACTTAGATAGAATGCAAAAAGTGTACTTTAAATTTAAAAGCTTCTTGAATCTGACTAAGAAAGAACTTCATTAACTGGTTAAGTAAACAAGTGTAATATAAAGCAATTCTTTTAACAACTCTAAAACCGTAAACACTGAAT
CDS Sequence
- >AT3G13470.1
ATGGCATCGACATTCACTGCCACGTCTTCCCTTGGTTCGTTGCTTGCTCCCAATGCTATCAAGTTGTCTTCTGCGACTAGCATCTCTTCAAGCTCGTTTGGAAGGAGACATAACGTGTGCGTCAGAAGATCCCGTCCTGCCATAGTATGTGCAGCCAAGGAGTTGCATTTCAATAAGGATGGGACTACCATAAGGAAACTTCAGACTGGTGTTAACAAGCTCGCGGACCTTGTTGGTGTCACACTTGGACCAAAAGGGAGAAATGTTGTTCTTGAGAGCAAGTATGGATCCCCAAGAATTGTTAATGATGGTGTCACTGTTGCGAGGGAGGTCGAGTTGGAGGACCCGGTTGAGAACATTGGTGCAAAGCTTGTAAGGCAAGCAGCTGCAAAGACCAATGACTTGGCTGGTGACGGTACAACAACATCTGTTGTTCTTGCACAAGGTTTTATTGCTGAGGGTGTCAAGGTGGTGGCTGCAGGTGCGAACCCTGTATTGATCACTAGGGGGATTGAGAAGACTGCAAAGGCTTTGGTTAACGAGCTGAAACTTATGTCTAAGGAGGTTGAAGACAGTGAACTTGCTGATGTGGCAGCTGTTAGTGCGGGTAATAACCACGAAGTTGGAAGTATGATTGCTGAAGCAATGAGCAAAGTGGGCAGGAAGGGTGTGGTGACCCTGGAGGAGGGAAAAAGCGCTGAGAACAACCTTTATGTTGTGGAAGGAATGCAATTTGACCGTGGTTATATCTCCCCATACTTTGTGACAGACAGTGAGAAAATGTCTGTTGAGTATGACAATTGCAAGTTGCTTCTTGTTGACAAGAAAGTAACCAATGCAAGGGATCTTGTTGGGGTTCTAGAGGATGCGATTAGAGGCGGATACCCAATCCTCATAATTGCAGAAGATATTGAACAAGAAGCCTTAGCTACTCTTGTTGTTAACAAGCTTAGAGGCACACTGAAGATTGCAGCTCTCAAAGCTCCTGGATTTGGAGAGCGCAAGAGCCAATACCTTGACGATATTGCCATTCTAACTGGAGCAACTGTGATCAGAGAGGAAGTTGGTCTTTCTCTTGACAAAGCTGGAAAAGAGGTTCTGGGTAACGCTTCCAAGGTTGTCCTGACAAAGGAAATGACAACAATTGTGGGTGATGGGACCACACAAGAAGCAGTGAACAAGCGTGTTGTACAGATTAGGAATCTTATTGAGCAAGCGGAGCAAGACTACGAGAAGGAAAAATTAAATGAGAGAATTGCGAAGCTCTCTGGTGGAGTTGCTGTAATTCAGGTTGGAGCTCAAACTGAGACAGAGCTCAAAGAAAAGAAGCTGAGAGTGGAAGATGCTCTTAATGCTACAAAGGCTGCTGTTGAGGAAGGTATTGTCGTTGGTGGTGGTTGCACTCTGCTCCGGCTTGCATCAAAGGTCGATGCCATCAAGGATACCCTTGAAAATGATGAAGAAAAGGTTGGAGCGGAAATTGTTAAAAGAGCACTGAGTTACCCTCTGAAATTGATAGCTAAGAATGCTGGTGTTAATGGAAGTGTTGTCAGCGAGAAGGTGCTGGCTAACGATAATGTGAAATTTGGATACAATGCTGCAACCGGCAAGTATGAAGACCTGATGGCTGCAGGCATCATCGACCCGACAAAGGTTGTGAGATGTTGCTTAGAACATGCCGCCTCAGTTGCAAAGACGTTCTTGATGTCTGACTGTGTGGTTGTTGAGATCCCAGAGCCAGAGCCAGTTCCTGCTGGTAACCCAATGGACAACTCAGGTTATGGATACTAA
Protein Sequence
- >AT3G13470.1
MASTFTATSSLGSLLAPNAIKLSSATSISSSSFGRRHNVCVRRSRPAIVCAAKELHFNKDGTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVNELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLEDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGNASKVVLTKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY