Information report for AT3G13450
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- CS68927 — No visible phenotype.
Functional Keywords
Literature and News
- Multiple signaling pathways in gene expression during sugar starvation. Pharmacological analysis of din gene expression in suspension-cultured cells of Arabidopsis. DOI: 10.1104/pp.124.3.1139 ; PMID: 11080291
- The sfr6 mutant of Arabidopsis is defective in transcriptional activation via CBF/DREB1 and DREB2 and shows sensitivity to osmotic stress. DOI: 10.1046/j.1365-313x.2003.01734.x ; PMID: 12753580
- Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02399.x ; PMID: 15860015
- Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria. DOI: 10.1007/s11103-006-9075-1 ; PMID: 17120136
- Peroxisomal metabolism of propionic acid and isobutyric acid in plants. DOI: 10.1074/jbc.M701028200 ; PMID: 17580301
- Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism. DOI: 10.1186/1471-2229-8-76 ; PMID: 18616834
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The Impact of the Branched-Chain Ketoacid Dehydrogenase Complex on Amino Acid Homeostasis in Arabidopsis. DOI: 10.1104/pp.15.00461 ; PMID: 25986129
- Arabidopsis ACYL-ACTIVATING ENZYME 9 (AAE9) encoding an isobutyl-CoA synthetase is a key factor connecting branched-chain amino acid catabolism with iso-branched wax biosynthesis. DOI: 10.1111/nph.17941 ; PMID: 34942034
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A654F6R1
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F6R1
- EnsemblPlants: AT3G13450.1
- Gramene: AT3G13450.1
- KEGG: ath:AT3G13450
- Orthologous matrix: PCLFVET
- ExpressionAtlas: AT3G13450
- InterPro: IPR005475, IPR009014, IPR029061
- PANTHER: PTHR42980, PTHR42980:SF1
- SUPFAM: SSF52518, SSF52922
- Gene3D: 3.40.50.920, 3.40.50.970
- SWISS-MODEL: A0A654F6R1
- Conserved Domain Database: cd07036
Sequences
cDNA Sequence
- >AT3G13450.1
GTACTTTCATGTCTGTTTTGGTTTCATCCAAAAGTATCAAATTTGTGTGATCTTCTCCAGAAGAAACTTGAGGAACTTTAAGCTAAACCTCTGTAGTTTTCAGATTGATTCGTTGGTGGAAAGCGTCTAAATTTTGCGTAAATGGCGGCAGCTCTTGTACGCAGATTCTGCCGGGGATCATCTTTTCCGGTCTCTGGTCATGGATATAGGATGCTATCGACGGTTGAAAATGTATCTGAAAGTGGTAAATCGATGAATCTATACTCTGCTATTAATCAAGCTCTTCACATCGCTTTAGAGACCGATCCTCGGTCTTATGTTTTTGGGGAAGATGTTGGATTTGGTGGTGTCTTCCGATGTACAACAGGATTAGCTGAACGTTTTGGGAAATCTCGAGTTTTCAACACTCCTCTCTGCGAGCAAGGCATTGTTGGCTTTGGCATTGGTTTAGCTGCAATGGGAAATCGAGTTATTGCGGAAATTCAGTTTGCGGATTATATTTTCCCGGCTTTTGATCAGATTGTTAATGAGGCTGCAAAGTTCAGATACCGAAGTGGAAACCAGTTTAACTGTGGAGGACTCACTATTAGGGCACCGTACGGAGCAGTTGGTCACGGTGGACATTACCACTCGCAGTCCCCTGAAGCTTTCTTTTGTCATGTCCCTGGTATCAAAGTTGTTATTCCTCGAAGTCCACGGGAAGCTAAGGGATTATTATTGTCATCCATCCGTGATCCGAATCCCGTTGTCTTTTTCGAACCAAAGTGGCTATATCGTCAAGCGGTAGAGGATGTCCCTGAAGATGACTATATGATACCTTTATCTGAGGCAGAGGTTATGCGAGAAGGTTCCGACATAACTCTTGTTGGATGGGGAGCACAGCTCACTATCATGGAACAAGCATGTCTTGACGCAGAAAACGAAGGAATATCGTGTGAATTGATAGATCTCAAGACTCTGATCCCTTGGGATAAGGAAATCGTTGAGACCTCAGTGAGAAAGACTGGCAGACTTCTTATTAGCCATGAAGCTCCTGTTACAGGAGGCTTTGGGGCCGAGATCGCTGCAACTATAGTTGAGCGTTGCTTCTTGAGGTTAGAAGCACCTGTAAGCAGAGTTTGTGGCCTGGACACTCCTTTCCCTCTAGTGTTCGAACCTTTCTACATGCCAACCAAGAACAAGATATTGGATGCAATCAGATCCACTGTGAATTACTAGCCCATCTTAGCATTGTACACATGATTCTCTGTCTCCTATCTTCGAAATAATTATTGATGCTGGTGGTTCAGACATGTAATGGATACTGTAATCACCACTTTTGTTATTTAATCTATGATCTTGAAACTCTCCATCTTTGTTC
CDS Sequence
- >AT3G13450.1
ATGGCGGCAGCTCTTGTACGCAGATTCTGCCGGGGATCATCTTTTCCGGTCTCTGGTCATGGATATAGGATGCTATCGACGGTTGAAAATGTATCTGAAAGTGGTAAATCGATGAATCTATACTCTGCTATTAATCAAGCTCTTCACATCGCTTTAGAGACCGATCCTCGGTCTTATGTTTTTGGGGAAGATGTTGGATTTGGTGGTGTCTTCCGATGTACAACAGGATTAGCTGAACGTTTTGGGAAATCTCGAGTTTTCAACACTCCTCTCTGCGAGCAAGGCATTGTTGGCTTTGGCATTGGTTTAGCTGCAATGGGAAATCGAGTTATTGCGGAAATTCAGTTTGCGGATTATATTTTCCCGGCTTTTGATCAGATTGTTAATGAGGCTGCAAAGTTCAGATACCGAAGTGGAAACCAGTTTAACTGTGGAGGACTCACTATTAGGGCACCGTACGGAGCAGTTGGTCACGGTGGACATTACCACTCGCAGTCCCCTGAAGCTTTCTTTTGTCATGTCCCTGGTATCAAAGTTGTTATTCCTCGAAGTCCACGGGAAGCTAAGGGATTATTATTGTCATCCATCCGTGATCCGAATCCCGTTGTCTTTTTCGAACCAAAGTGGCTATATCGTCAAGCGGTAGAGGATGTCCCTGAAGATGACTATATGATACCTTTATCTGAGGCAGAGGTTATGCGAGAAGGTTCCGACATAACTCTTGTTGGATGGGGAGCACAGCTCACTATCATGGAACAAGCATGTCTTGACGCAGAAAACGAAGGAATATCGTGTGAATTGATAGATCTCAAGACTCTGATCCCTTGGGATAAGGAAATCGTTGAGACCTCAGTGAGAAAGACTGGCAGACTTCTTATTAGCCATGAAGCTCCTGTTACAGGAGGCTTTGGGGCCGAGATCGCTGCAACTATAGTTGAGCGTTGCTTCTTGAGGTTAGAAGCACCTGTAAGCAGAGTTTGTGGCCTGGACACTCCTTTCCCTCTAGTGTTCGAACCTTTCTACATGCCAACCAAGAACAAGATATTGGATGCAATCAGATCCACTGTGAATTACTAG
Protein Sequence
- >AT3G13450.1
MAAALVRRFCRGSSFPVSGHGYRMLSTVENVSESGKSMNLYSAINQALHIALETDPRSYVFGEDVGFGGVFRCTTGLAERFGKSRVFNTPLCEQGIVGFGIGLAAMGNRVIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTIRAPYGAVGHGGHYHSQSPEAFFCHVPGIKVVIPRSPREAKGLLLSSIRDPNPVVFFEPKWLYRQAVEDVPEDDYMIPLSEAEVMREGSDITLVGWGAQLTIMEQACLDAENEGISCELIDLKTLIPWDKEIVETSVRKTGRLLISHEAPVTGGFGAEIAATIVERCFLRLEAPVSRVCGLDTPFPLVFEPFYMPTKNKILDAIRSTVNY