Gene Details:
- Gene ID: AT3G13390
- Gene Symbol: sks11
- Gene Name: SKU5 similar 11
- Description: SKU5 similar 11;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- plant embryo , stamen , sepal , flower , inflorescence flower pedicel , collective leaf structure , pollen , pollen
Literature:
- The Arabidopsis SKU5 gene encodes an extracellular glycosyl phosphatidylinositol-anchored glycoprotein involved in directional root growth. DOI: 10.1105/tpc.002360 ; PMID: 12119380
- SKS6, a multicopper oxidase-like gene, participates in cotyledon vascular patterning during Arabidopsis thaliana development. DOI: 10.1007/s00425-005-0012-3 ; PMID: 15986216
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Proteome mapping of mature pollen of Arabidopsis thaliana. DOI: 10.1002/pmic.200402011 ; PMID: 16247729
Sequences:
cDNA Sequence
- >AT3G13390.1
CTCGAAATTCAAACCCCAAAGCATAATTATATATAACAATAAACAATTAGTACCAAAACACATAAAAAATCTATAACTGTTATCTCAACCAAAAATTGTTTATTGTTATGCGAGGGGTTAAACTCTTGGCCGCGTGCCTCTACCTGGCCGCTGCCGCAACGGTGGTAGTCCGAGCCGAAGATCCTTACTTCCATCACGTATGGAACGTGACCTACGGAACCGTGTCTCCTCTCGGTGTTCCACAACAAGTCATTCTCATCAACGGACAATTCCCTGGTCCCAACGTCAACTCAACCTCCAACAACAACGTCATCATTAATGTCTTCAACAACCTCGACGAACCTTTCCTCCTCACATGGAATGGGATCCAACACAGGAAGAACTGTTGGCAAGATGGGACTCCAGGAACTATGTGTCCGATCATGCCCGGCACCAACTACACTTACCATTTCCAGCCTAAGGATCAGATCGGAAGCTATTTCTACTACCCCAGCACCGCGATGCACCGTTCCGCTGGTGGATTCGGTGGTCTCCGTGTGAACAGCCGTCTCCTCATCCCGGTCCCTTATGCTGACCCAGAAGATGACTACACCGTCTTGATCGGTGACTGGTACACCAAGAGCCACACCCAGTTGAAGAAATTCCTTGACAGCGGTCGTACTCTTGGCCGTCCAGATGGTATTCTCATCAACGGAAAGTCCGGGAAAGGCGATGGATCCGATGCACCTCTCTTTACCTTGAAACCTGGAAAGACCTACAGGGTTAGGATCTGTAACGTGGGTCTCAAGACATCTCTTAACTTTAGGATTCAGAATCACAAGTTGAAGCTTGTTGAGATGGAAGGATCGCACGTTCTCCAGAACGATTATGACTCTCTCGACGTTCACGTTGGTCAGTGTTACGGAACCATCCTTACCGCTAATCAGGAAGCTAAAGATTACTACATGGTTGCATCCTCTAGGTTCTTGAAGTCGGTTATAACCACCACTGGTCTTCTCCGCTATGAGGGAGGCAAAGGTCCCGCTTCTTCGCAGCTACCCCCTGGTCCAGTCGGCTGGGCTTGGTCCTTGAACCAGTTCCGATCTTTCAGGTGGAACTTGACCGCCAGTGCAGCCAGGCCTAACCCTCAGGGATCTTACCACTACGGAAAGATCAACATCACACGCACCATCAAGCTTGTGAACACTCAAGGCAAGGTCGATGGAAAGCTCAGGTACGCTTTGAACGGAGTCTCGCACACTGACCCCGAAACCCCATTGAAGCTTGCGGAGTACTTTGGTGTTGCCGACAAGGTTTTCAAGTACGACTCCATCACTGATAACCCAACCCCAGAACAAATCAAGAGCATCAAGATCGTGCCAAATGTTCTTAACATCACTCACCGCACCTTCATCGAGGTGGTGTTTGAGAACCACGAGAAGAGTGTTCAGTCGTGGCACTTGGACGGTTACTCCTTCTTTGCCGTCGCTGTCGAGCCAGGGACTTGGACCCCAGAGAAGAGAAAAAACTACAACCTGCTGGACGCAGTGAGCAGACACACAGTCCAAGTCTACCCAAAATGTTGGGCAGCAATCTTGCTCACATTCGACAACTGTGGAATGTGGAACGTTCGATCTGAAAACTCCGAGAGACGCTACTTAGGACAGCAGCTTTACGCGAGTGTCTTGTCACCAGAGAAATCACTGAGAGATGAATACAACATGCCTGAGACAAGCCTCCAATGTGGTCTAGTGAAGGGTACACCTAAGCCTAACCCTTACGCTGGAGCCTAAGTTAAATTTTACAAAAAATTTACTTTTAATGCAACAAAATAGTTTGGATTCTTCTGTTGATTCAATCGATTGAGAGGCATTTGCAAGACGTTTACCTAACGGATTTATTTTTCTGGTTTTTTGGGTCTTTTCTTTTTAACTGTTTTAAATTTTATAAAATTGATTTTTAAAAGTATATGGTTTATTCGTATATACATGAAATTGAAATGTATGTATGTCTATCCCTTAAGTAATTTTTTTCTTGTTTTAAAAAGACGCATTAAGTTTCTCTTTTTTTGTTCTTCATTTTTTTGTAACGCTTATGTAATGTATCCATAATCTTCAACGAAATAAGCAGAGATCATCTTCTTTGTCTGACATGAAGTGTTCTTTCCCTAATTGCCAATCTTGAGATCAAAAGCAGAAATACCATCAATCAAAGTTTATCATATTGTTAATCATCATCACACATAAGTATATAACACG
CDS Sequence
- >AT3G13390.1
ATGCGAGGGGTTAAACTCTTGGCCGCGTGCCTCTACCTGGCCGCTGCCGCAACGGTGGTAGTCCGAGCCGAAGATCCTTACTTCCATCACGTATGGAACGTGACCTACGGAACCGTGTCTCCTCTCGGTGTTCCACAACAAGTCATTCTCATCAACGGACAATTCCCTGGTCCCAACGTCAACTCAACCTCCAACAACAACGTCATCATTAATGTCTTCAACAACCTCGACGAACCTTTCCTCCTCACATGGAATGGGATCCAACACAGGAAGAACTGTTGGCAAGATGGGACTCCAGGAACTATGTGTCCGATCATGCCCGGCACCAACTACACTTACCATTTCCAGCCTAAGGATCAGATCGGAAGCTATTTCTACTACCCCAGCACCGCGATGCACCGTTCCGCTGGTGGATTCGGTGGTCTCCGTGTGAACAGCCGTCTCCTCATCCCGGTCCCTTATGCTGACCCAGAAGATGACTACACCGTCTTGATCGGTGACTGGTACACCAAGAGCCACACCCAGTTGAAGAAATTCCTTGACAGCGGTCGTACTCTTGGCCGTCCAGATGGTATTCTCATCAACGGAAAGTCCGGGAAAGGCGATGGATCCGATGCACCTCTCTTTACCTTGAAACCTGGAAAGACCTACAGGGTTAGGATCTGTAACGTGGGTCTCAAGACATCTCTTAACTTTAGGATTCAGAATCACAAGTTGAAGCTTGTTGAGATGGAAGGATCGCACGTTCTCCAGAACGATTATGACTCTCTCGACGTTCACGTTGGTCAGTGTTACGGAACCATCCTTACCGCTAATCAGGAAGCTAAAGATTACTACATGGTTGCATCCTCTAGGTTCTTGAAGTCGGTTATAACCACCACTGGTCTTCTCCGCTATGAGGGAGGCAAAGGTCCCGCTTCTTCGCAGCTACCCCCTGGTCCAGTCGGCTGGGCTTGGTCCTTGAACCAGTTCCGATCTTTCAGGTGGAACTTGACCGCCAGTGCAGCCAGGCCTAACCCTCAGGGATCTTACCACTACGGAAAGATCAACATCACACGCACCATCAAGCTTGTGAACACTCAAGGCAAGGTCGATGGAAAGCTCAGGTACGCTTTGAACGGAGTCTCGCACACTGACCCCGAAACCCCATTGAAGCTTGCGGAGTACTTTGGTGTTGCCGACAAGGTTTTCAAGTACGACTCCATCACTGATAACCCAACCCCAGAACAAATCAAGAGCATCAAGATCGTGCCAAATGTTCTTAACATCACTCACCGCACCTTCATCGAGGTGGTGTTTGAGAACCACGAGAAGAGTGTTCAGTCGTGGCACTTGGACGGTTACTCCTTCTTTGCCGTCGCTGTCGAGCCAGGGACTTGGACCCCAGAGAAGAGAAAAAACTACAACCTGCTGGACGCAGTGAGCAGACACACAGTCCAAGTCTACCCAAAATGTTGGGCAGCAATCTTGCTCACATTCGACAACTGTGGAATGTGGAACGTTCGATCTGAAAACTCCGAGAGACGCTACTTAGGACAGCAGCTTTACGCGAGTGTCTTGTCACCAGAGAAATCACTGAGAGATGAATACAACATGCCTGAGACAAGCCTCCAATGTGGTCTAGTGAAGGGTACACCTAAGCCTAACCCTTACGCTGGAGCCTAA
Protein Sequence
- >AT3G13390.1
MRGVKLLAACLYLAAAATVVVRAEDPYFHHVWNVTYGTVSPLGVPQQVILINGQFPGPNVNSTSNNNVIINVFNNLDEPFLLTWNGIQHRKNCWQDGTPGTMCPIMPGTNYTYHFQPKDQIGSYFYYPSTAMHRSAGGFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYTKSHTQLKKFLDSGRTLGRPDGILINGKSGKGDGSDAPLFTLKPGKTYRVRICNVGLKTSLNFRIQNHKLKLVEMEGSHVLQNDYDSLDVHVGQCYGTILTANQEAKDYYMVASSRFLKSVITTTGLLRYEGGKGPASSQLPPGPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDGKLRYALNGVSHTDPETPLKLAEYFGVADKVFKYDSITDNPTPEQIKSIKIVPNVLNITHRTFIEVVFENHEKSVQSWHLDGYSFFAVAVEPGTWTPEKRKNYNLLDAVSRHTVQVYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCGLVKGTPKPNPYAGA