Gene Details:
- Gene ID: AT3G13360
- Gene Symbol: WIP3
- Gene Name: WPP domain interacting protein 3
- Description: WPP domain interacting protein 3;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- CS39984 — No visible phenotype.
- wip1-1 wip2-1 wip3-1 — Both endogenous RanGAP1 and RanGAP1-GFP were absent from the nuclear envelope in root-tip cells of the triple mutant.
- wip1-1 wip2-1 wip3-1 — Mutant plants had no observable defect in growth or development under standard laboratory conditions and no change in auxin sensitivity was observed in a standard root-elongation assay.
- wip1-1 wip3-1 — When tested by immunofluorescence for RanGAP1 localization, no difference from wild-type plants was detected.
- wip2-1 wip3-1 — When tested by immunofluorescence for RanGAP1 localization, no difference from wild-type plants was detected.
- wip3-1 — When tested by immunofluorescence for RanGAP1 localization, no difference from wild-type plants was detected.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis. DOI: 10.1186/1471-2229-8-104 ; PMID: 18854047
- Efficient plant male fertility depends on vegetative nuclear movement mediated by two families of plant outer nuclear membrane proteins. DOI: 10.1073/pnas.1323104111 ; PMID: 25074908
- Comprehensive nuclear proteome of Arabidopsis obtained by sequential extraction. DOI: 10.1080/19491034.2019.1603093 ; PMID: 30961429
- The Small GTPase Superfamily in Plants: A Conserved Regulatory Module with Novel Functions. DOI: 10.1146/annurev-arplant-112619-025827 ; PMID: 32442390
- WPP-domain proteins mimic the activity of the HSC70-1 chaperone in preventing mistargeting of RanGAP1-anchoring protein WIT1. DOI: 10.1104/pp.109.143404 ; PMID: 19617588
Sequences:
cDNA Sequence
- >AT3G13360.2
TTTATCTTTAATGTTTTTTTTTTCCTGTGTCTGTAGAATCATTTCGTCCACTTTAATCATTTTCGTTGATACAGCTTCTCCCGGTAATAATGTCGGCGGATTTCTCCGTCGCACTCTAAATTCTTTAGGATTTTGTTTCTCTTGCTCATCTGTAACTCAGGCAAGCTCTCGTTGGATTGTTTTAGGCATGAATGAGTCAGTCCCTGATTCTGTGGAAGACAACGGTAATTCAGTCCCTGCAAATGGATTATTAGTATTGCCTGATAATGATCATGAGGAAGGAGGTGTTGGATCACCTCAACGATCGAACAGCGTTGAATCTCCTGGTGGATCAGTACATTCTACGAGGAAAGGTTTTGGTTTGAAGAAATGGAGACGGATCAAAAGAGATGGTCCTGTGAGAGATGAGGCTGCTCCTGTTGATGATGGTAGTAAGTTACTGAAACGTGGATTGGCTGGTTTGGTGAATCCTCCTTCTAAACATGTAGAATTTTCTTCAGTTGAAGCAAGGCAGAGTAGTGAAGGCTCTGTTGGGTCAGTGAATATGGTGCATCATCCAGGGGTAGCCAACGGGTTTAGTCCCGATATAGGTTGTATGTTTGCTGTTGGGCAAGCGTTTGAGAAAAGTGAAGAGCATAGTGGTAATACCATAGGTGGAAAGAATGTAGTAGGAGGGAAGGTTGTTTCAGGTAGCCAAGAGAAACTCTGGAGTGATACCATCAAGAGGGCTAGCGAAGAGCGGGGGGATATCGAGAAGGAGAAGCCTTGTTCCAGCTTGGATTCCGACTTGAGAAGTAGTGATTTTGTGTTTTCGACTGGCTCGGTTTCTGTTGGTAACCATGGAGAGAAAGATGAGAGATTGACGATGAATTATATTGGGGGATTTAGCAATGAAGGTCAAGTTAAGGAGGAAGTTCAAACATATAGCAGAAGCGAAAACGGGAATAAAGAAGACGATGGAGAGAGTAAGAAAAACAACAATCATTGGGCAGATAAAGACGCACTTGCAGATTCTATCAGAAGCTTTGCAGTTCTGCAGGAAGTTCTTTGGAAAGAGGTTCAAAGTTTCCAGGAGCTAGGTAAGGAATCTGTACTACTACATTCGAACACCGATGAATTGAGTTCAGACCAGCCAAGTCATCAAAATTGTAAAGAAGATAACTCAACATCCTCAGGATCAAAGGCACTGATCTTGAAGGAGAAGGTAAAACTTCTGGAACACAAACTCGAGGAAGCGAGAGCTGCTCTCGAGGCAAAGGAAGCTAGGATCCAAGAACTCGAAAACTCAAAGATTGAATCTGAACTTGAATGCATCTTCCAGAGAAAGATTGAAACTGAAATCGAACATTTGATGCTCACAAGATCTCTGAGTTCACTACAAGTACTCCAAGAAACTAAGAAGTTACATTCTCTGAAAGAAGATCCTGTATCAAACCGTGGAAACATCTTAGGAAAAACATGTAAGCTCGGTTTCTATATCTTGACACAATTGATCTTGCTCGTCTCTATACTTCGGTTTCTCGTCCTACAATTCTCTCCTGCTTCACGATTAGTAATACCAACTTGAAAAATTCCTTCTCCTTGTTGTGTTACCGAACATTTTTTTTGTTTCTCCAGATTGTAATAAATAAGGTCTCTCAAGGATATTGTCCCCATTGTTATAGTTAAATTACGATGTTTAAATTTCCCATCAACAACTAAAGAGACATTATTATTTTGTGAACTAGATTTTTGATATCGAATCCGATCACCG - >AT3G13360.1
TTTATCTTTAATGTTTTTTTTTTCCTGTGTCTGTAGAATCATTTCGTCCACTTTAATCATTTTCGTTGATACAGCTTCTCCCGGTAATAATGTCGGCGGATTTCTCCGTCGCACTCTAAATTCTTTAGGATTTTGTTTCTCTTGCTCATCTGTAACTCAGGCAAGCTCTCGTTGGATTGTTTTAGGCATGAATGAGTCAGTCCCTGATTCTGTGGAAGACAACGGTAATTCAGTCCCTGCAAATGGATTATTAGTATTGCCTGATAATGATCATGAGGAAGGAGGTGTTGGATCACCTCAACGATCGAACAGCGTTGAATCTCCTGGTGGATCAGTACATTCTACGAGGAAAGGTTTTGGTTTGAAGAAATGGAGACGGATCAAAAGAGATGGTCCTGTGAGAGATGAGGCTGCTCCTGTTGATGATGGTAGTAAGTTACTGAAACGTGGATTGGCTGGTTTGGTGAATCCTCCTTCTAAACATGTAGAATTTTCTTCAGTTGAAGCAAGGCAGAGTAGTGAAGGCTCTGTTGGGTCAGTGAATATGGTGCATCATCCAGGGGTAGCCAACGGGTTTAGTCCCGATATAGGTTGTATGTTTGCTGTTGGGCAAGCGTTTGAGAAAAGTGAAGAGCATAGTGGTAATACCATAGGTGGAAAGAATGTAGTAGGAGGGAAGGTTGTTTCAGGTAGCCAAGAGAAACTCTGGAGTGATACCATCAAGAGGGCTAGCGAAGAGCGGGGGGATATCGAGAAGGAGAAGCCTTGTTCCAGCTTGGATTCCGACTTGAGAAGTAGTGATTTTGTGTTTTCGACTGGCTCGGTTTCTGTTGGTAACCATGGAGAGAAAGATGAGAGATTGACGATGAATTATATTGGGGGATTTAGCAATGAAGGTCAAGTTAAGGAGGAAGTTCAAACATATAGCAGAAGCGAAAACGGGAATAAAGAAGACGATGGAGAGAGTAAGAAAAACAACAATCATTGGGCAGATAAAGACGCACTTGCAGATTCTATCAGAAGCTTTGCAGTTCTGCAGGAAGTTCTTTGGAAAGAGGTTCAAAGTTTCCAGGAGCTAGGTAAGGAATCTGTACTACTACATTCGAACACCGATGAATTGAGTTCAGACCAGCCAAGTCATCAAAATTGTAAAGAAGATAACTCAACATCCTCAGGATCAAAGGCACTGATCTTGAAGGAGAAGGTAAAACTTCTGGAACACAAACTCGAGGAAGCGAGAGCTGCTCTCGAGGCAAAGGAAGCTAGGATCCAAGAACTCGAAAACTCAAAGATTGAATCTGAACTTGAATGCATCTTCCAGAGAAAGATTGAAACTGAAATCGAACATTTGATGCTCACAAGATCTCTGAGTTCACTACAAGTACTCCAAGAAACTAAGAAGTTACATTCTCTGAAAGAAGATCCTGTATCAAACCGTGGAAACATCTTAGGAAAAACATGTAAGCTCGGTTTCTATATCTTGACACAATTGATCTTGCTCGTCTCTATACTTCGGTTTCTCGTCCTACAATTCTCTCCTGCTTCACGATTAGTAATACCAACTTGAAAAATTCCTTCTCCTTGTTGTGTTACCGAACATTTTTTTTGTTTCTCCAGATTGTAATAAATAAGGTCTCTCAAGGATATTGTCCCCATTGTTATAGTTAAATTACGATGTTTAAATTTCCCATCAACAACTAAAGAGACATTATTATTTTGTGAACTAGATTTTTGATATCGAATCCGATCACCG
CDS Sequence
- >AT3G13360.2
ATGTTTTTTTTTTCCTGTGTCTGTAGAATCATTTCGTCCACTTTAATCATTTTCGTTGATACAGCTTCTCCCGGTAATAATGTCGGCGGATTTCTCCGTCGCACTCTAAATTCTTTAGGATTTTGTTTCTCTTGCTCATCTGTAACTCAGGCAAGCTCTCGTTGGATTGTTTTAGGCATGAATGAGTCAGTCCCTGATTCTGTGGAAGACAACGGTAATTCAGTCCCTGCAAATGGATTATTAGTATTGCCTGATAATGATCATGAGGAAGGAGGTGTTGGATCACCTCAACGATCGAACAGCGTTGAATCTCCTGGTGGATCAGTACATTCTACGAGGAAAGGTTTTGGTTTGAAGAAATGGAGACGGATCAAAAGAGATGGTCCTGTGAGAGATGAGGCTGCTCCTGTTGATGATGGTAGTAAGTTACTGAAACGTGGATTGGCTGGTTTGGTGAATCCTCCTTCTAAACATGTAGAATTTTCTTCAGTTGAAGCAAGGCAGAGTAGTGAAGGCTCTGTTGGGTCAGTGAATATGGTGCATCATCCAGGGGTAGCCAACGGGTTTAGTCCCGATATAGGTTGTATGTTTGCTGTTGGGCAAGCGTTTGAGAAAAGTGAAGAGCATAGTGGTAATACCATAGGTGGAAAGAATGTAGTAGGAGGGAAGGTTGTTTCAGGTAGCCAAGAGAAACTCTGGAGTGATACCATCAAGAGGGCTAGCGAAGAGCGGGGGGATATCGAGAAGGAGAAGCCTTGTTCCAGCTTGGATTCCGACTTGAGAAGTAGTGATTTTGTGTTTTCGACTGGCTCGGTTTCTGTTGGTAACCATGGAGAGAAAGATGAGAGATTGACGATGAATTATATTGGGGGATTTAGCAATGAAGGTCAAGTTAAGGAGGAAGTTCAAACATATAGCAGAAGCGAAAACGGGAATAAAGAAGACGATGGAGAGAGTAAGAAAAACAACAATCATTGGGCAGATAAAGACGCACTTGCAGATTCTATCAGAAGCTTTGCAGTTCTGCAGGAAGTTCTTTGGAAAGAGGTTCAAAGTTTCCAGGAGCTAGGTAAGGAATCTGTACTACTACATTCGAACACCGATGAATTGAGTTCAGACCAGCCAAGTCATCAAAATTGTAAAGAAGATAACTCAACATCCTCAGGATCAAAGGCACTGATCTTGAAGGAGAAGGTAAAACTTCTGGAACACAAACTCGAGGAAGCGAGAGCTGCTCTCGAGGCAAAGGAAGCTAGGATCCAAGAACTCGAAAACTCAAAGATTGAATCTGAACTTGAATGCATCTTCCAGAGAAAGATTGAAACTGAAATCGAACATTTGATGCTCACAAGATCTCTGAGTTCACTACAAGTACTCCAAGAAACTAAGAAGTTACATTCTCTGAAAGAAGATCCTGTATCAAACCGTGGAAACATCTTAGGAAAAACATGTAAGCTCGGTTTCTATATCTTGACACAATTGATCTTGCTCGTCTCTATACTTCGGTTTCTCGTCCTACAATTCTCTCCTGCTTCACGATTAGTAATACCAACTTGA - >AT3G13360.1
ATGTTTTTTTTTTCCTGTGTCTGTAGAATCATTTCGTCCACTTTAATCATTTTCGTTGATACAGCTTCTCCCGGTAATAATGTCGGCGGATTTCTCCGTCGCACTCTAAATTCTTTAGGATTTTGTTTCTCTTGCTCATCTGTAACTCAGGCAAGCTCTCGTTGGATTGTTTTAGGCATGAATGAGTCAGTCCCTGATTCTGTGGAAGACAACGGTAATTCAGTCCCTGCAAATGGATTATTAGTATTGCCTGATAATGATCATGAGGAAGGAGGTGTTGGATCACCTCAACGATCGAACAGCGTTGAATCTCCTGGTGGATCAGTACATTCTACGAGGAAAGGTTTTGGTTTGAAGAAATGGAGACGGATCAAAAGAGATGGTCCTGTGAGAGATGAGGCTGCTCCTGTTGATGATGGTAGTAAGTTACTGAAACGTGGATTGGCTGGTTTGGTGAATCCTCCTTCTAAACATGTAGAATTTTCTTCAGTTGAAGCAAGGCAGAGTAGTGAAGGCTCTGTTGGGTCAGTGAATATGGTGCATCATCCAGGGGTAGCCAACGGGTTTAGTCCCGATATAGGTTGTATGTTTGCTGTTGGGCAAGCGTTTGAGAAAAGTGAAGAGCATAGTGGTAATACCATAGGTGGAAAGAATGTAGTAGGAGGGAAGGTTGTTTCAGGTAGCCAAGAGAAACTCTGGAGTGATACCATCAAGAGGGCTAGCGAAGAGCGGGGGGATATCGAGAAGGAGAAGCCTTGTTCCAGCTTGGATTCCGACTTGAGAAGTAGTGATTTTGTGTTTTCGACTGGCTCGGTTTCTGTTGGTAACCATGGAGAGAAAGATGAGAGATTGACGATGAATTATATTGGGGGATTTAGCAATGAAGGTCAAGTTAAGGAGGAAGTTCAAACATATAGCAGAAGCGAAAACGGGAATAAAGAAGACGATGGAGAGAGTAAGAAAAACAACAATCATTGGGCAGATAAAGACGCACTTGCAGATTCTATCAGAAGCTTTGCAGTTCTGCAGGAAGTTCTTTGGAAAGAGGTTCAAAGTTTCCAGGAGCTAGGTAAGGAATCTGTACTACTACATTCGAACACCGATGAATTGAGTTCAGACCAGCCAAGTCATCAAAATTGTAAAGAAGATAACTCAACATCCTCAGGATCAAAGGCACTGATCTTGAAGGAGAAGGTAAAACTTCTGGAACACAAACTCGAGGAAGCGAGAGCTGCTCTCGAGGCAAAGGAAGCTAGGATCCAAGAACTCGAAAACTCAAAGATTGAATCTGAACTTGAATGCATCTTCCAGAGAAAGATTGAAACTGAAATCGAACATTTGATGCTCACAAGATCTCTGAGTTCACTACAAGTACTCCAAGAAACTAAGAAGTTACATTCTCTGAAAGAAGATCCTGTATCAAACCGTGGAAACATCTTAGGAAAAACATGTAAGCTCGGTTTCTATATCTTGACACAATTGATCTTGCTCGTCTCTATACTTCGGTTTCTCGTCCTACAATTCTCTCCTGCTTCACGATTAGTAATACCAACTTGA
Protein Sequence
- >AT3G13360.2
MFFFSCVCRIISSTLIIFVDTASPGNNVGGFLRRTLNSLGFCFSCSSVTQASSRWIVLGMNESVPDSVEDNGNSVPANGLLVLPDNDHEEGGVGSPQRSNSVESPGGSVHSTRKGFGLKKWRRIKRDGPVRDEAAPVDDGSKLLKRGLAGLVNPPSKHVEFSSVEARQSSEGSVGSVNMVHHPGVANGFSPDIGCMFAVGQAFEKSEEHSGNTIGGKNVVGGKVVSGSQEKLWSDTIKRASEERGDIEKEKPCSSLDSDLRSSDFVFSTGSVSVGNHGEKDERLTMNYIGGFSNEGQVKEEVQTYSRSENGNKEDDGESKKNNNHWADKDALADSIRSFAVLQEVLWKEVQSFQELGKESVLLHSNTDELSSDQPSHQNCKEDNSTSSGSKALILKEKVKLLEHKLEEARAALEAKEARIQELENSKIESELECIFQRKIETEIEHLMLTRSLSSLQVLQETKKLHSLKEDPVSNRGNILGKTCKLGFYILTQLILLVSILRFLVLQFSPASRLVIPT - >AT3G13360.1
MFFFSCVCRIISSTLIIFVDTASPGNNVGGFLRRTLNSLGFCFSCSSVTQASSRWIVLGMNESVPDSVEDNGNSVPANGLLVLPDNDHEEGGVGSPQRSNSVESPGGSVHSTRKGFGLKKWRRIKRDGPVRDEAAPVDDGSKLLKRGLAGLVNPPSKHVEFSSVEARQSSEGSVGSVNMVHHPGVANGFSPDIGCMFAVGQAFEKSEEHSGNTIGGKNVVGGKVVSGSQEKLWSDTIKRASEERGDIEKEKPCSSLDSDLRSSDFVFSTGSVSVGNHGEKDERLTMNYIGGFSNEGQVKEEVQTYSRSENGNKEDDGESKKNNNHWADKDALADSIRSFAVLQEVLWKEVQSFQELGKESVLLHSNTDELSSDQPSHQNCKEDNSTSSGSKALILKEKVKLLEHKLEEARAALEAKEARIQELENSKIESELECIFQRKIETEIEHLMLTRSLSSLQVLQETKKLHSLKEDPVSNRGNILGKTCKLGFYILTQLILLVSILRFLVLQFSPASRLVIPT