Gene Details:
- Gene ID: AT3G13320
- Gene Symbol: atcax2, CAX2
- Gene Name: cation exchanger 2
- Description: cation exchanger 2;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000034 — vascular system — sistema vascular (Spanish, exact), vasculature (exact), 維管束系 (Japanese, exact)
- PO:0020144 — apical meristem — AM (exact), meristema apical (Spanish, exact), 頂端分裂組織 (Japanese, exact), primary meristem (related), promeristem (broad)
Germplasm Phenotype:
- CS25436 — Vacuolar H+/Ca2+ transporter; play a central role in Ca2+ and metal sequestration into the vacuole; localized in the tonoplast; low efficiency H+/Ca2+ exchanger; has a low affinity for Ca2+ but can transport other metals including Mn2+ and Cd2+; no discernable morphological phenotypes or alterations in Ca2+/H+ antiport activity; exhibit a reduction in vacuolar Mn2+/H+ antiport and reduced V-type H+ -ATPase (V-ATPase) activity; expressed throughout the plant and strongly expressed in flower tissue, vascular tissue and in the apical meristem of young plants.
- cax2 — Subtle morphological defects
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , vascular system , apical meristem
Literature:
- CAX1, an H+/Ca2+ antiporter from Arabidopsis. DOI: 10.1073/pnas.93.16.8782 ; PMID: 8710949
- Structural determinants of Ca2+ transport in the Arabidopsis H+/Ca2+ antiporter CAX1. DOI: 10.1074/jbc.M106637200 ; PMID: 11562366
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
- Evidence of differential pH regulation of the Arabidopsis vacuolar Ca2+/H+ antiporters CAX1 and CAX2. DOI: 10.1016/j.febslet.2005.03.085 ; PMID: 15862304
- Expression of an Arabidopsis CAX2 variant in potato tubers increases calcium levels with no accumulation of manganese. DOI: 10.1007/s00299-006-0214-6 ; PMID: 17024452
- Comparative analysis of CAX2-like cation transporters indicates functional and regulatory diversity. DOI: 10.1042/BJ20081814 ; PMID: 18950291
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Phylogenetic relationships within cation transporter families of Arabidopsis. DOI: 10.1104/pp.126.4.1646 ; PMID: 11500563
Sequences:
cDNA Sequence
- >AT3G13320.1
CGGGAACTGTCGTAAATGGGGTGTGAAACGGCGCCGTTATTTGGGTGTCTCCATGTCTTCTTCCACATTCTAAGAAAGAAAGAAAGAAAATTAAATAATTTATTTTCATCAACTGATGAAACATCAATTCAACCAAGAACGAAACTTCCTCTCGCTCGCGCTCTACTGACAATCTGAGATCCAGGGATTCTATTCCAGATCACTCTCAATTCTCTCCTCCATATACTATCGAGCAAACGGATTCATCATCATACTCTGCGTTGTCTCCAGCAGATCAGAAGAAGAATAAGTAGAGAAGAAACCTCAATCAAAGTCGTTGTTCTTTCTTATTTCGGTTATGCTTGATTTGGTTTCTCCTACTTGTTCACCAATTCTTCTTCTCTGACCCTTCGTTGACTGCAAGGTTGCTGCAGAAGCGGACGCTGTAGTTTTATCCTTGGTCCATGTGTTGGTAGCACAAGGGTATGAGTTGTTGTAAAGTGCCAGTTCTTATTGAAGCACAAGTTGAAATGGTGTCGGCTAATGAACTTGAGAACAAAAGCCTATTTAGGCAAGAAGAAGATGCCACACAAACTAAAGAAGCTTCTTTAATGGAGCAAGGATCACTTTCTACAAGTTTCCCCCAGCACACGCCTAAAGCACCAAAGAACAGCGTACTTAATAGCATAAAGATCGTGATTTTTTGTAATAAACTCAATCTACTACTACCTTTCGGTCCTCTAGCCATATTGGTCCACTACATGATAGATAGTAAGGGGTGGGTGTTCTTGCTGACGTTAGTAGGCATTACACCATTGGCTGAACGTCTAGGATATGCCACAGAGCAACTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCTTAAATGCTACATTCGGGAATGTGACAGAGCTGATCATATCAATTTTCGCTTTGAAAAATGGAATGATACGTGTTGTTCAGCTGACGTTACTAGGCTCAATTCTGTCTAACATGTTACTTGTACTTGGCTGCGCCTTCTTTTGTGGTGGGCTAGTCTTTTACCAAAAAGACCAAGTCTTTGACAAAGGAATTGCTACTGTGAATTCAGGATTGCTTTTGATGGCTGTCATGGGGATACTCTTCCCGGCTGTTCTTCACTACACCCATAGCGAGGTTCATGCTGGATCATCAGAGCTAGCCCTGTCAAGGTTCAGCAGTTGCATAATGCTTATAGCTTATGCTGCTTACCTCTTCTTCCAGTTAAAGAGCCAATCTAATTCTTATAGCCCTCTCGATGAGGAATCAAATCAGAACGAAGAAACTTCTGCCGAAGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATTTGGCTTTCAATATTGACTGCTTGGGTCTCTCTTCTTTCTGGCTATCTTGTTGATGCCATAGAGGGTGCCTCAGTCTCATGGAATATACCAATAGCTTTTATCAGTACCATCTTGCTTCCTATAGTTGGGAACGCAGCTGAACATGCAGGGGCTATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCTATTGGGTCCTCGATCCAGATTTCCATGTTTGCGGTCCCATTCTGCGTGGTGATTGGATGGATGATGGGTCAACAGATGGACCTTAACTTCCAGCTTTTTGAGACGGCGATGCTGTTCATCACTGTTATAGTAGTAGCATTTTTTCTCCAGGAAGGGTCATCGAATTACTTCAAAGGATTGATGCTGATTCTTTGTTATTTGATAGTAGCTGCCAGTTTCTTTGTACACGAAGATCCTCACCAAGATGGTATATAAACCGGAAGAAGAGTCTGGTGTGAAGCATAAAAGGGTCTTAATTAATGATCTAAGGAACACGAATTGTTGGGGAAGAGATGTGAAGATGTAAATCTGATTCTCAAGTGGTATCCACAAACTCGAATCTGCTAAACGTATTATTTGATTTACTTGTTCGTCTGACTAAAAGTCTTTGTTCGAACAAGTGAAGGTTTATTTATTCCTTTTTGGCTTTCCCTCCCCAACCAAAATCAACATTCTTAGAAGGTTACAAGTTTTGATAATATTACAATGATTCCATATTACAAATGATATTATGAAAGATTGAAGATTTGTTCTTGTGCTACACAAAATAATCACATTGCTATGATTTCTATTTCTCAATTTTTACTTTGAAGGATAACAGTCTATAATTTGACTGGAAACGTTCTCAATTTATTATTGTTATGTGTTCTTCATGCAGAAAAAAGAAGGGGAGATTTTGAAAACTACCTGTGTTTCTGTGTTTGAG
CDS Sequence
- >AT3G13320.1
ATGAGTTGTTGTAAAGTGCCAGTTCTTATTGAAGCACAAGTTGAAATGGTGTCGGCTAATGAACTTGAGAACAAAAGCCTATTTAGGCAAGAAGAAGATGCCACACAAACTAAAGAAGCTTCTTTAATGGAGCAAGGATCACTTTCTACAAGTTTCCCCCAGCACACGCCTAAAGCACCAAAGAACAGCGTACTTAATAGCATAAAGATCGTGATTTTTTGTAATAAACTCAATCTACTACTACCTTTCGGTCCTCTAGCCATATTGGTCCACTACATGATAGATAGTAAGGGGTGGGTGTTCTTGCTGACGTTAGTAGGCATTACACCATTGGCTGAACGTCTAGGATATGCCACAGAGCAACTGGCTTGTTACACGGGTCCAACTGTTGGAGGCCTCTTAAATGCTACATTCGGGAATGTGACAGAGCTGATCATATCAATTTTCGCTTTGAAAAATGGAATGATACGTGTTGTTCAGCTGACGTTACTAGGCTCAATTCTGTCTAACATGTTACTTGTACTTGGCTGCGCCTTCTTTTGTGGTGGGCTAGTCTTTTACCAAAAAGACCAAGTCTTTGACAAAGGAATTGCTACTGTGAATTCAGGATTGCTTTTGATGGCTGTCATGGGGATACTCTTCCCGGCTGTTCTTCACTACACCCATAGCGAGGTTCATGCTGGATCATCAGAGCTAGCCCTGTCAAGGTTCAGCAGTTGCATAATGCTTATAGCTTATGCTGCTTACCTCTTCTTCCAGTTAAAGAGCCAATCTAATTCTTATAGCCCTCTCGATGAGGAATCAAATCAGAACGAAGAAACTTCTGCCGAAGATGAAGATCCTGAGATCTCCAAGTGGGAAGCTATCATTTGGCTTTCAATATTGACTGCTTGGGTCTCTCTTCTTTCTGGCTATCTTGTTGATGCCATAGAGGGTGCCTCAGTCTCATGGAATATACCAATAGCTTTTATCAGTACCATCTTGCTTCCTATAGTTGGGAACGCAGCTGAACATGCAGGGGCTATCATGTTTGCCATGAAAGACAAGCTGGATCTGTCTTTGGGAGTGGCTATTGGGTCCTCGATCCAGATTTCCATGTTTGCGGTCCCATTCTGCGTGGTGATTGGATGGATGATGGGTCAACAGATGGACCTTAACTTCCAGCTTTTTGAGACGGCGATGCTGTTCATCACTGTTATAGTAGTAGCATTTTTTCTCCAGGAAGGGTCATCGAATTACTTCAAAGGATTGATGCTGATTCTTTGTTATTTGATAGTAGCTGCCAGTTTCTTTGTACACGAAGATCCTCACCAAGATGGTATATAA
Protein Sequence
- >AT3G13320.1
MSCCKVPVLIEAQVEMVSANELENKSLFRQEEDATQTKEASLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPLAILVHYMIDSKGWVFLLTLVGITPLAERLGYATEQLACYTGPTVGGLLNATFGNVTELIISIFALKNGMIRVVQLTLLGSILSNMLLVLGCAFFCGGLVFYQKDQVFDKGIATVNSGLLLMAVMGILFPAVLHYTHSEVHAGSSELALSRFSSCIMLIAYAAYLFFQLKSQSNSYSPLDEESNQNEETSAEDEDPEISKWEAIIWLSILTAWVSLLSGYLVDAIEGASVSWNIPIAFISTILLPIVGNAAEHAGAIMFAMKDKLDLSLGVAIGSSIQISMFAVPFCVVIGWMMGQQMDLNFQLFETAMLFITVIVVAFFLQEGSSNYFKGLMLILCYLIVAASFFVHEDPHQDGI