Gene Details:

  • Gene ID: AT3G13290
  • Gene Symbol: VCR
  • Gene Name: varicose-related
  • Description: varicose-like protein;(source:Araport11)
  • TAIR Accession:
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Germplasm Phenotype:

  • VCR:vcr  — The siliques of self-pollinated heterozygous plants were examined. Dissected siliques showed a full seed set, indicating that the loss of VCR did not affect female gametophyte or embryo development.
  • vcr  — No visible phenotype.

Literature:

Sequences:

cDNA Sequence
  • >AT3G13290.1
    CAGATTTACGCCCCACTATCGAAAACGCAAGTCTACAAAACTTCTTTAGCTGTTCTCTCACTCCTTTCAAGTCATCATCGTCTATCTCTACTCGCTTTTCGCGCTTCCCCTCTCTACGTGACTTTTGATTTCTTCTTCAGATCCGCCGAGTCTTCTTTTTCTGAAATATATTCACGAACCTTCACATTCAAATTACACTTGTCTATTGATCGATATCGCAAACCCTAGATTCGGCGATCGTAAATCAATGGCGTCTTCACCTGGTAACACTAACCCTCACAATCCTCCGCCGTTCGATCTCGGTACTATCTTCAAACCCTCATCCAACCCTTATCCTCCCCCTACAGGTCCGTTTCTTAACAACCAGTACAATCAGCAACTATACGCGCCGCCTGGTATCGCCGCCCAACCATCTCCGGTGAATCAAACGCAACAGGATGTGTCTTCCTCTTCCTCCGCTACTAACTTGCAACCACAGAGAACGCTATCTTATCCCACGCCACCTCTCAATCCCCAATCTCCCCGTGTCAATCACAATCCGGGAACGCACATCCTCGCTCTCCTCAACAACGGAGGTGCCGTGGCGAACCAAGAGCCGTCGCATCACAACGAGATCGCTCGAGCTTTTCCCGGCGGTTCGGGTCCTATTCATGTTCCAAGCGGTAAAATGCCCAAGGGAAGGCGATTGGTTGGTGAACATGCGGTGTATGATGTTGATGTGAGATTACAGGGAGAGATTCAACCGCAGCTGGAGGTGACTCCGATTACCAAGTACGGCTCGGATCCTCAGCTTGTACTCGGTAGGCAAATTGCTGTGAATAAGGTCTACATTTGCTATGGATTGAAAGGAGGAAGCATTCGTGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCTCAGAGAGTAACGGACATGGCTTTCTTTGCCGAAGATGTTCATCTCTTAGCTAGTGTTAGTCTAGATGGAAAAGTTTTTGTGTGGAAAATTTCCGAAGGATCTGAGGGAGATGAACAATCCCAGATAACTGGAAAGATAGTTGTTGCTCTTCAGATACTTGGAGAGGAAGACACCAAACATCCACGTGTCTGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTGCTGCGAATCGATACTACAAAAGTTGGCAGAGGTGAAGTGTTCTCTGCCGAGGCACCTCTCCAGTGTCATCTTGATAAACTAATTGATGGTGTTCAGATTGTGGGTAAGCATGATGGAGAAGTGACAGATTTGTCAATGTGCCAATGGATGACCACGCGCCTGGTTTCTTCTTCAGTTGATGGCACGGTTAAGATATGGCAAGATCGTAAGACACAACCACTTGTAGTATTGAGACCTCATGATGGACTTCCAGTCAATTCTGCCATATTTGTGACATCCCCGGAAAGACCTGATCACATCATACTTATCACGGGGGGTCCTCTAAATCGAGAAATCAAGATTTGGGTCTCCGCTGGGGAAGAAGGGTGGCTTCTACCCGCTGATACTGAATCGTGGAGATGTACCCAGACACTTGATTTGAAAAGTTCAACTGAGCCACAAGCTGAAAAGGCATTTTTCAACCAAGTCATAGCATTGTCTGAAGCAGGCCTGCTTTTGCTTGCAAATGCGAGAAGGAACGCCATATATTCCGTGCATTTGGACTATGGCTCATCTCCAGTGGAAACGCTGATGGATTACTTGTCCGAGTTTACAGTCACTATGCCTATATTGAGTTTTATTGGGACAAATGATCACCCAGAAGAACCATTTGTTAAAGTGTATTGTGTTCAGACTCTAGCAATCCAGCAGTATACATTAGACTTATTCTTGTGCATGCCACCTCCAAGAGAGAATGTGGGTTTTGAGAAGTCAGATTCTACTGTGTCACGGGAGGCAAACCTTGTTGAAAGCACGTTAGAAACATCTGGAATGAAGCCTACCGAATTACCTTCAGTTGGTTCAGTGCCTAAACCATCTATTTTAGTGAATAGATCGGAAAATGCTAATATGTTGAGTTTTCCAGCGGGCCCTGCATCAGCGGGGATCACACCACCAGCAATTGTTCCACCCAACGGTGAGCCTAAAACTTCTGGGATGCCTTCTGAGACCAGTGATGTAGATTCTGCGTATGCTCCTTCACCTCAACTTCCTCTAAGCCCCAGACTATCAAGTAAACTTTCTGGCTATCACACTCCTGTAGAAGCGTTTGAGCAAGTGCTACCACATCATAAGCTTGGTGGCAAAACAAGTTCTGCTGATTATTTTTATGTGAGGCAAACTGATGATGTTGGAGGAAGAAATTTGGATGTGTCTTCTGTCGAGGAAAACTGTAGAAGCAAGGACACGAATGTTACACCTGATGATGATGTGTCTGGGATTCGAAGCCCGTCAGCTTTTTTCAAACAGCCCACTCATCTCGTAACTCCTTCAGAGATATTGATGGGCGTTTCTTCCACTGAAGCCTCCATTACTACTGAAGACAAGAGGGATAGAGATGCAAATATTGAGGAAGTGAATAATGATGCAAGAGGCTTAGAAGTTGAGTTGAAAGAAGTAGGCGAAGCACAGACTTCGCAGAATGGTGAAATTAACTATCACGAAACAACTGAGAATCACACTTCAGAAAGTAGAGAAAATATCTTCTGCTCACAGGCTTCAAATCTCAGCACTGAGATGGCAAGAGACCGTCATCCTATTACAGAGGGAAGTGCCATTCCTGGGGATTCTATGGCTTATGGACAACCTTTACAAGCTGGAGATGAAAGGGGTCTTGACTCAAGAGATGTCTCTGCAAAGCTTCCTGAGTCGGGTTCATCTAGTGGGTTAGTAGCTACAAATAGCAAAGGAAAGAAGCAGAAGGCGAAAAATTCACAGGGTCCTGGGTTGTCATCTACATCCTCAAATGTTGCTAATCTGGCTGACTCCTTCAATGAGCAAAGTCAGAGTTTAAATCATCCCATGGCAGATTTACTTCCTCAGTTGTTAGCATTGCAAGAAACAATGACTCAGGTAATGGCTTCGCAGAAGGAGATGCAGAGACAACTATCAAATGCTGTCACTGGCCCTATCGTAAAAGAAGGTAAAAAACTAGAAGTTGCCTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCTGATGCTCTATGGGCCCACTTCCAAGAGGAGGCTGTTAAGAATGAAAAGGCATTACGTGACCATGGCCAGCAAATTATGAATGAAACGACAAACTTCACGAGTAAAGAGTTAAATGCCATGTTTGAGAAAACGATGAAGAAGGAATTTGCTTCAGTTGGTCCAACCCTAGCACGTGTAGTAACTCCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTCCAGAGAGGAATTGGTGACAAAGCAGTCAATCAGCTTGAAAAATCTGTTAATTCAAAGCTTGAAACAACCGTAGCCAGGCAGATTCAAGCCCAATTTCAGACATCTGGCAGACAAGTCCTGCAGGAAGGTCTTAGGTCAAGTATGGAGTCCTCAGTCATACCTTCCTTTGAGAGGTCATGCAAAACCATGTTTGAGCAAGTAGACTCAACCTTACAGAAAGGAATTGGTAAGCACACGAGCGCAACACAGCAACGGATTGACTCTGGACAATCTCAGCTTGCTCATACTCTGAGGGAAACCATTAGTTCTGCATCATCAGTTACTCAAGCCCTAAATCGTGAATTAGCCGAGAGTCAAAGGAATCGCTTAGCTCTCACAGCTGCTGGATCAAATCCCTTGGTTACTCAACTAAGTAACGGGCCTTTAGGTGCTCTTCTTGAAAAGGTTGAAGCACCTATGGACCCAACAACAGAGCTATCAAGGTTGATATCTGAACGCAAGTACGAAGAATCTTTCACATCAGCTCTACAAAGAAGCGATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTTCGTGGACTACTGGCGATGAATCCGCTTCCGCTGAGCCAAGGTGTGCTTCTTTCACTGCTGCAGCAGTTAGCTTGTGACATAAGCACGGACACATCCCGTAAGCTAGGTTGGATGACTGATGTGGTTACAGCCATAAACCCATCAGATCAGATGATAGCGGTCCATGCTCGCCCAATCTTTGAACAAGTTTATCAGATTTTGCACCATCACCGTAACGCACCAGGCAGCGACGTCTCTGCCGTCAGACTAATAATGCACGTCATCAACTCTTTACTTATGAGCTGCAAATGACATCTCGCTCTCTCTGTTTCTTCTTGTTAGTTACATGCATAAAACATAGGAAACCTCTCTTCTCTGTATTTCTCTCTCTACTCTAGTTAGATTTTTTTTGGTTACCCATTAGTTCAATTTCCTTTAACTGTAAACATCTGGTTGGTTCTACGTCTATAATGTTCCCTTTTTCTTCTCCGAGAGAATGAGTTTGCTAGGATCTGGAAAACCCTGAGAAAACATGAAGATCATGTATGGGCAGGGTATACTGATTTTCTAATGAAATTGGTTTTGAAGTAACTACAAGTTACCTGCAGAATAGACAGATGAGTTTGAAGACATTATGGGAATCTGGTGTGGCAGTAAGCAGAGAATTTGTCAAAATTGAGCAATTGCAATAAAAAATCTTTTTCTTTACTTTTGAGTTCAGTTGATCAGTTTTTGGATTGAAGGGTATTTGCTGTTGGGTTCGGTTGCCTTTACTTGCATGTGAGCTCAGCTGACCATGAATTCAGAATCCTTGTCATCTTCTTCTCTTTTGT
CDS Sequence
  • >AT3G13290.1
    ATGGCGTCTTCACCTGGTAACACTAACCCTCACAATCCTCCGCCGTTCGATCTCGGTACTATCTTCAAACCCTCATCCAACCCTTATCCTCCCCCTACAGGTCCGTTTCTTAACAACCAGTACAATCAGCAACTATACGCGCCGCCTGGTATCGCCGCCCAACCATCTCCGGTGAATCAAACGCAACAGGATGTGTCTTCCTCTTCCTCCGCTACTAACTTGCAACCACAGAGAACGCTATCTTATCCCACGCCACCTCTCAATCCCCAATCTCCCCGTGTCAATCACAATCCGGGAACGCACATCCTCGCTCTCCTCAACAACGGAGGTGCCGTGGCGAACCAAGAGCCGTCGCATCACAACGAGATCGCTCGAGCTTTTCCCGGCGGTTCGGGTCCTATTCATGTTCCAAGCGGTAAAATGCCCAAGGGAAGGCGATTGGTTGGTGAACATGCGGTGTATGATGTTGATGTGAGATTACAGGGAGAGATTCAACCGCAGCTGGAGGTGACTCCGATTACCAAGTACGGCTCGGATCCTCAGCTTGTACTCGGTAGGCAAATTGCTGTGAATAAGGTCTACATTTGCTATGGATTGAAAGGAGGAAGCATTCGTGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCTCAGAGAGTAACGGACATGGCTTTCTTTGCCGAAGATGTTCATCTCTTAGCTAGTGTTAGTCTAGATGGAAAAGTTTTTGTGTGGAAAATTTCCGAAGGATCTGAGGGAGATGAACAATCCCAGATAACTGGAAAGATAGTTGTTGCTCTTCAGATACTTGGAGAGGAAGACACCAAACATCCACGTGTCTGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTGCTGCGAATCGATACTACAAAAGTTGGCAGAGGTGAAGTGTTCTCTGCCGAGGCACCTCTCCAGTGTCATCTTGATAAACTAATTGATGGTGTTCAGATTGTGGGTAAGCATGATGGAGAAGTGACAGATTTGTCAATGTGCCAATGGATGACCACGCGCCTGGTTTCTTCTTCAGTTGATGGCACGGTTAAGATATGGCAAGATCGTAAGACACAACCACTTGTAGTATTGAGACCTCATGATGGACTTCCAGTCAATTCTGCCATATTTGTGACATCCCCGGAAAGACCTGATCACATCATACTTATCACGGGGGGTCCTCTAAATCGAGAAATCAAGATTTGGGTCTCCGCTGGGGAAGAAGGGTGGCTTCTACCCGCTGATACTGAATCGTGGAGATGTACCCAGACACTTGATTTGAAAAGTTCAACTGAGCCACAAGCTGAAAAGGCATTTTTCAACCAAGTCATAGCATTGTCTGAAGCAGGCCTGCTTTTGCTTGCAAATGCGAGAAGGAACGCCATATATTCCGTGCATTTGGACTATGGCTCATCTCCAGTGGAAACGCTGATGGATTACTTGTCCGAGTTTACAGTCACTATGCCTATATTGAGTTTTATTGGGACAAATGATCACCCAGAAGAACCATTTGTTAAAGTGTATTGTGTTCAGACTCTAGCAATCCAGCAGTATACATTAGACTTATTCTTGTGCATGCCACCTCCAAGAGAGAATGTGGGTTTTGAGAAGTCAGATTCTACTGTGTCACGGGAGGCAAACCTTGTTGAAAGCACGTTAGAAACATCTGGAATGAAGCCTACCGAATTACCTTCAGTTGGTTCAGTGCCTAAACCATCTATTTTAGTGAATAGATCGGAAAATGCTAATATGTTGAGTTTTCCAGCGGGCCCTGCATCAGCGGGGATCACACCACCAGCAATTGTTCCACCCAACGGTGAGCCTAAAACTTCTGGGATGCCTTCTGAGACCAGTGATGTAGATTCTGCGTATGCTCCTTCACCTCAACTTCCTCTAAGCCCCAGACTATCAAGTAAACTTTCTGGCTATCACACTCCTGTAGAAGCGTTTGAGCAAGTGCTACCACATCATAAGCTTGGTGGCAAAACAAGTTCTGCTGATTATTTTTATGTGAGGCAAACTGATGATGTTGGAGGAAGAAATTTGGATGTGTCTTCTGTCGAGGAAAACTGTAGAAGCAAGGACACGAATGTTACACCTGATGATGATGTGTCTGGGATTCGAAGCCCGTCAGCTTTTTTCAAACAGCCCACTCATCTCGTAACTCCTTCAGAGATATTGATGGGCGTTTCTTCCACTGAAGCCTCCATTACTACTGAAGACAAGAGGGATAGAGATGCAAATATTGAGGAAGTGAATAATGATGCAAGAGGCTTAGAAGTTGAGTTGAAAGAAGTAGGCGAAGCACAGACTTCGCAGAATGGTGAAATTAACTATCACGAAACAACTGAGAATCACACTTCAGAAAGTAGAGAAAATATCTTCTGCTCACAGGCTTCAAATCTCAGCACTGAGATGGCAAGAGACCGTCATCCTATTACAGAGGGAAGTGCCATTCCTGGGGATTCTATGGCTTATGGACAACCTTTACAAGCTGGAGATGAAAGGGGTCTTGACTCAAGAGATGTCTCTGCAAAGCTTCCTGAGTCGGGTTCATCTAGTGGGTTAGTAGCTACAAATAGCAAAGGAAAGAAGCAGAAGGCGAAAAATTCACAGGGTCCTGGGTTGTCATCTACATCCTCAAATGTTGCTAATCTGGCTGACTCCTTCAATGAGCAAAGTCAGAGTTTAAATCATCCCATGGCAGATTTACTTCCTCAGTTGTTAGCATTGCAAGAAACAATGACTCAGGTAATGGCTTCGCAGAAGGAGATGCAGAGACAACTATCAAATGCTGTCACTGGCCCTATCGTAAAAGAAGGTAAAAAACTAGAAGTTGCCTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCTGATGCTCTATGGGCCCACTTCCAAGAGGAGGCTGTTAAGAATGAAAAGGCATTACGTGACCATGGCCAGCAAATTATGAATGAAACGACAAACTTCACGAGTAAAGAGTTAAATGCCATGTTTGAGAAAACGATGAAGAAGGAATTTGCTTCAGTTGGTCCAACCCTAGCACGTGTAGTAACTCCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTCCAGAGAGGAATTGGTGACAAAGCAGTCAATCAGCTTGAAAAATCTGTTAATTCAAAGCTTGAAACAACCGTAGCCAGGCAGATTCAAGCCCAATTTCAGACATCTGGCAGACAAGTCCTGCAGGAAGGTCTTAGGTCAAGTATGGAGTCCTCAGTCATACCTTCCTTTGAGAGGTCATGCAAAACCATGTTTGAGCAAGTAGACTCAACCTTACAGAAAGGAATTGGTAAGCACACGAGCGCAACACAGCAACGGATTGACTCTGGACAATCTCAGCTTGCTCATACTCTGAGGGAAACCATTAGTTCTGCATCATCAGTTACTCAAGCCCTAAATCGTGAATTAGCCGAGAGTCAAAGGAATCGCTTAGCTCTCACAGCTGCTGGATCAAATCCCTTGGTTACTCAACTAAGTAACGGGCCTTTAGGTGCTCTTCTTGAAAAGGTTGAAGCACCTATGGACCCAACAACAGAGCTATCAAGGTTGATATCTGAACGCAAGTACGAAGAATCTTTCACATCAGCTCTACAAAGAAGCGATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTTCGTGGACTACTGGCGATGAATCCGCTTCCGCTGAGCCAAGGTGTGCTTCTTTCACTGCTGCAGCAGTTAGCTTGTGACATAAGCACGGACACATCCCGTAAGCTAGGTTGGATGACTGATGTGGTTACAGCCATAAACCCATCAGATCAGATGATAGCGGTCCATGCTCGCCCAATCTTTGAACAAGTTTATCAGATTTTGCACCATCACCGTAACGCACCAGGCAGCGACGTCTCTGCCGTCAGACTAATAATGCACGTCATCAACTCTTTACTTATGAGCTGCAAATGA
Protein Sequence
  • >AT3G13290.1
    MASSPGNTNPHNPPPFDLGTIFKPSSNPYPPPTGPFLNNQYNQQLYAPPGIAAQPSPVNQTQQDVSSSSSATNLQPQRTLSYPTPPLNPQSPRVNHNPGTHILALLNNGGAVANQEPSHHNEIARAFPGGSGPIHVPSGKMPKGRRLVGEHAVYDVDVRLQGEIQPQLEVTPITKYGSDPQLVLGRQIAVNKVYICYGLKGGSIRVLNINTALRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKISEGSEGDEQSQITGKIVVALQILGEEDTKHPRVCWHCHKQEILVVSIGKHVLRIDTTKVGRGEVFSAEAPLQCHLDKLIDGVQIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIKIWVSAGEEGWLLPADTESWRCTQTLDLKSSTEPQAEKAFFNQVIALSEAGLLLLANARRNAIYSVHLDYGSSPVETLMDYLSEFTVTMPILSFIGTNDHPEEPFVKVYCVQTLAIQQYTLDLFLCMPPPRENVGFEKSDSTVSREANLVESTLETSGMKPTELPSVGSVPKPSILVNRSENANMLSFPAGPASAGITPPAIVPPNGEPKTSGMPSETSDVDSAYAPSPQLPLSPRLSSKLSGYHTPVEAFEQVLPHHKLGGKTSSADYFYVRQTDDVGGRNLDVSSVEENCRSKDTNVTPDDDVSGIRSPSAFFKQPTHLVTPSEILMGVSSTEASITTEDKRDRDANIEEVNNDARGLEVELKEVGEAQTSQNGEINYHETTENHTSESRENIFCSQASNLSTEMARDRHPITEGSAIPGDSMAYGQPLQAGDERGLDSRDVSAKLPESGSSSGLVATNSKGKKQKAKNSQGPGLSSTSSNVANLADSFNEQSQSLNHPMADLLPQLLALQETMTQVMASQKEMQRQLSNAVTGPIVKEGKKLEVALGRMIEKSSKSNADALWAHFQEEAVKNEKALRDHGQQIMNETTNFTSKELNAMFEKTMKKEFASVGPTLARVVTPVIEKTVSSAITESFQRGIGDKAVNQLEKSVNSKLETTVARQIQAQFQTSGRQVLQEGLRSSMESSVIPSFERSCKTMFEQVDSTLQKGIGKHTSATQQRIDSGQSQLAHTLRETISSASSVTQALNRELAESQRNRLALTAAGSNPLVTQLSNGPLGALLEKVEAPMDPTTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQLACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAPGSDVSAVRLIMHVINSLLMSCK