Information report for AT3G13290
Gene Details
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Functional Descriptions
Functional Keywords
Literature and News
- VARICOSE, a WD-domain protein, is required for leaf blade development. DOI: 10.1242/dev.00909 ; PMID: 14660546
- Components of the Arabidopsis mRNA decapping complex are required for early seedling development. DOI: 10.1105/tpc.106.047621 ; PMID: 17513503
- Contrasting patterns of transposable-element insertion polymorphism and nucleotide diversity in autotetraploid and allotetraploid Arabidopsis species. DOI: 10.1534/genetics.107.085761 ; PMID: 18493073
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- SnRK2 Protein Kinases and mRNA Decapping Machinery Control Root Development and Response to Salt. DOI: 10.1104/pp.19.00818 ; PMID: 31570508
- A NYN domain protein directly interacts with DECAPPING1 and is required for phyllotactic pattern. DOI: 10.1093/plphys/kiab529 ; PMID: 34791434
- Components of the Arabidopsis mRNA decapping complex are required for early seedling development. DOI: 10.1105/tpc.106.047621 ; PMID: 17513503
Gene Resources
Homologs
- Brachypodium distachyon Bradi4g25645
- Rosa chinensis RchiOBHm_Chr4g0407801
Sequences
cDNA Sequence
- >AT3G13290.1
CAGATTTACGCCCCACTATCGAAAACGCAAGTCTACAAAACTTCTTTAGCTGTTCTCTCACTCCTTTCAAGTCATCATCGTCTATCTCTACTCGCTTTTCGCGCTTCCCCTCTCTACGTGACTTTTGATTTCTTCTTCAGATCCGCCGAGTCTTCTTTTTCTGAAATATATTCACGAACCTTCACATTCAAATTACACTTGTCTATTGATCGATATCGCAAACCCTAGATTCGGCGATCGTAAATCAATGGCGTCTTCACCTGGTAACACTAACCCTCACAATCCTCCGCCGTTCGATCTCGGTACTATCTTCAAACCCTCATCCAACCCTTATCCTCCCCCTACAGGTCCGTTTCTTAACAACCAGTACAATCAGCAACTATACGCGCCGCCTGGTATCGCCGCCCAACCATCTCCGGTGAATCAAACGCAACAGGATGTGTCTTCCTCTTCCTCCGCTACTAACTTGCAACCACAGAGAACGCTATCTTATCCCACGCCACCTCTCAATCCCCAATCTCCCCGTGTCAATCACAATCCGGGAACGCACATCCTCGCTCTCCTCAACAACGGAGGTGCCGTGGCGAACCAAGAGCCGTCGCATCACAACGAGATCGCTCGAGCTTTTCCCGGCGGTTCGGGTCCTATTCATGTTCCAAGCGGTAAAATGCCCAAGGGAAGGCGATTGGTTGGTGAACATGCGGTGTATGATGTTGATGTGAGATTACAGGGAGAGATTCAACCGCAGCTGGAGGTGACTCCGATTACCAAGTACGGCTCGGATCCTCAGCTTGTACTCGGTAGGCAAATTGCTGTGAATAAGGTCTACATTTGCTATGGATTGAAAGGAGGAAGCATTCGTGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCTCAGAGAGTAACGGACATGGCTTTCTTTGCCGAAGATGTTCATCTCTTAGCTAGTGTTAGTCTAGATGGAAAAGTTTTTGTGTGGAAAATTTCCGAAGGATCTGAGGGAGATGAACAATCCCAGATAACTGGAAAGATAGTTGTTGCTCTTCAGATACTTGGAGAGGAAGACACCAAACATCCACGTGTCTGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTGCTGCGAATCGATACTACAAAAGTTGGCAGAGGTGAAGTGTTCTCTGCCGAGGCACCTCTCCAGTGTCATCTTGATAAACTAATTGATGGTGTTCAGATTGTGGGTAAGCATGATGGAGAAGTGACAGATTTGTCAATGTGCCAATGGATGACCACGCGCCTGGTTTCTTCTTCAGTTGATGGCACGGTTAAGATATGGCAAGATCGTAAGACACAACCACTTGTAGTATTGAGACCTCATGATGGACTTCCAGTCAATTCTGCCATATTTGTGACATCCCCGGAAAGACCTGATCACATCATACTTATCACGGGGGGTCCTCTAAATCGAGAAATCAAGATTTGGGTCTCCGCTGGGGAAGAAGGGTGGCTTCTACCCGCTGATACTGAATCGTGGAGATGTACCCAGACACTTGATTTGAAAAGTTCAACTGAGCCACAAGCTGAAAAGGCATTTTTCAACCAAGTCATAGCATTGTCTGAAGCAGGCCTGCTTTTGCTTGCAAATGCGAGAAGGAACGCCATATATTCCGTGCATTTGGACTATGGCTCATCTCCAGTGGAAACGCTGATGGATTACTTGTCCGAGTTTACAGTCACTATGCCTATATTGAGTTTTATTGGGACAAATGATCACCCAGAAGAACCATTTGTTAAAGTGTATTGTGTTCAGACTCTAGCAATCCAGCAGTATACATTAGACTTATTCTTGTGCATGCCACCTCCAAGAGAGAATGTGGGTTTTGAGAAGTCAGATTCTACTGTGTCACGGGAGGCAAACCTTGTTGAAAGCACGTTAGAAACATCTGGAATGAAGCCTACCGAATTACCTTCAGTTGGTTCAGTGCCTAAACCATCTATTTTAGTGAATAGATCGGAAAATGCTAATATGTTGAGTTTTCCAGCGGGCCCTGCATCAGCGGGGATCACACCACCAGCAATTGTTCCACCCAACGGTGAGCCTAAAACTTCTGGGATGCCTTCTGAGACCAGTGATGTAGATTCTGCGTATGCTCCTTCACCTCAACTTCCTCTAAGCCCCAGACTATCAAGTAAACTTTCTGGCTATCACACTCCTGTAGAAGCGTTTGAGCAAGTGCTACCACATCATAAGCTTGGTGGCAAAACAAGTTCTGCTGATTATTTTTATGTGAGGCAAACTGATGATGTTGGAGGAAGAAATTTGGATGTGTCTTCTGTCGAGGAAAACTGTAGAAGCAAGGACACGAATGTTACACCTGATGATGATGTGTCTGGGATTCGAAGCCCGTCAGCTTTTTTCAAACAGCCCACTCATCTCGTAACTCCTTCAGAGATATTGATGGGCGTTTCTTCCACTGAAGCCTCCATTACTACTGAAGACAAGAGGGATAGAGATGCAAATATTGAGGAAGTGAATAATGATGCAAGAGGCTTAGAAGTTGAGTTGAAAGAAGTAGGCGAAGCACAGACTTCGCAGAATGGTGAAATTAACTATCACGAAACAACTGAGAATCACACTTCAGAAAGTAGAGAAAATATCTTCTGCTCACAGGCTTCAAATCTCAGCACTGAGATGGCAAGAGACCGTCATCCTATTACAGAGGGAAGTGCCATTCCTGGGGATTCTATGGCTTATGGACAACCTTTACAAGCTGGAGATGAAAGGGGTCTTGACTCAAGAGATGTCTCTGCAAAGCTTCCTGAGTCGGGTTCATCTAGTGGGTTAGTAGCTACAAATAGCAAAGGAAAGAAGCAGAAGGCGAAAAATTCACAGGGTCCTGGGTTGTCATCTACATCCTCAAATGTTGCTAATCTGGCTGACTCCTTCAATGAGCAAAGTCAGAGTTTAAATCATCCCATGGCAGATTTACTTCCTCAGTTGTTAGCATTGCAAGAAACAATGACTCAGGTAATGGCTTCGCAGAAGGAGATGCAGAGACAACTATCAAATGCTGTCACTGGCCCTATCGTAAAAGAAGGTAAAAAACTAGAAGTTGCCTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCTGATGCTCTATGGGCCCACTTCCAAGAGGAGGCTGTTAAGAATGAAAAGGCATTACGTGACCATGGCCAGCAAATTATGAATGAAACGACAAACTTCACGAGTAAAGAGTTAAATGCCATGTTTGAGAAAACGATGAAGAAGGAATTTGCTTCAGTTGGTCCAACCCTAGCACGTGTAGTAACTCCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTCCAGAGAGGAATTGGTGACAAAGCAGTCAATCAGCTTGAAAAATCTGTTAATTCAAAGCTTGAAACAACCGTAGCCAGGCAGATTCAAGCCCAATTTCAGACATCTGGCAGACAAGTCCTGCAGGAAGGTCTTAGGTCAAGTATGGAGTCCTCAGTCATACCTTCCTTTGAGAGGTCATGCAAAACCATGTTTGAGCAAGTAGACTCAACCTTACAGAAAGGAATTGGTAAGCACACGAGCGCAACACAGCAACGGATTGACTCTGGACAATCTCAGCTTGCTCATACTCTGAGGGAAACCATTAGTTCTGCATCATCAGTTACTCAAGCCCTAAATCGTGAATTAGCCGAGAGTCAAAGGAATCGCTTAGCTCTCACAGCTGCTGGATCAAATCCCTTGGTTACTCAACTAAGTAACGGGCCTTTAGGTGCTCTTCTTGAAAAGGTTGAAGCACCTATGGACCCAACAACAGAGCTATCAAGGTTGATATCTGAACGCAAGTACGAAGAATCTTTCACATCAGCTCTACAAAGAAGCGATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTTCGTGGACTACTGGCGATGAATCCGCTTCCGCTGAGCCAAGGTGTGCTTCTTTCACTGCTGCAGCAGTTAGCTTGTGACATAAGCACGGACACATCCCGTAAGCTAGGTTGGATGACTGATGTGGTTACAGCCATAAACCCATCAGATCAGATGATAGCGGTCCATGCTCGCCCAATCTTTGAACAAGTTTATCAGATTTTGCACCATCACCGTAACGCACCAGGCAGCGACGTCTCTGCCGTCAGACTAATAATGCACGTCATCAACTCTTTACTTATGAGCTGCAAATGACATCTCGCTCTCTCTGTTTCTTCTTGTTAGTTACATGCATAAAACATAGGAAACCTCTCTTCTCTGTATTTCTCTCTCTACTCTAGTTAGATTTTTTTTGGTTACCCATTAGTTCAATTTCCTTTAACTGTAAACATCTGGTTGGTTCTACGTCTATAATGTTCCCTTTTTCTTCTCCGAGAGAATGAGTTTGCTAGGATCTGGAAAACCCTGAGAAAACATGAAGATCATGTATGGGCAGGGTATACTGATTTTCTAATGAAATTGGTTTTGAAGTAACTACAAGTTACCTGCAGAATAGACAGATGAGTTTGAAGACATTATGGGAATCTGGTGTGGCAGTAAGCAGAGAATTTGTCAAAATTGAGCAATTGCAATAAAAAATCTTTTTCTTTACTTTTGAGTTCAGTTGATCAGTTTTTGGATTGAAGGGTATTTGCTGTTGGGTTCGGTTGCCTTTACTTGCATGTGAGCTCAGCTGACCATGAATTCAGAATCCTTGTCATCTTCTTCTCTTTTGT
CDS Sequence
- >AT3G13290.1
ATGGCGTCTTCACCTGGTAACACTAACCCTCACAATCCTCCGCCGTTCGATCTCGGTACTATCTTCAAACCCTCATCCAACCCTTATCCTCCCCCTACAGGTCCGTTTCTTAACAACCAGTACAATCAGCAACTATACGCGCCGCCTGGTATCGCCGCCCAACCATCTCCGGTGAATCAAACGCAACAGGATGTGTCTTCCTCTTCCTCCGCTACTAACTTGCAACCACAGAGAACGCTATCTTATCCCACGCCACCTCTCAATCCCCAATCTCCCCGTGTCAATCACAATCCGGGAACGCACATCCTCGCTCTCCTCAACAACGGAGGTGCCGTGGCGAACCAAGAGCCGTCGCATCACAACGAGATCGCTCGAGCTTTTCCCGGCGGTTCGGGTCCTATTCATGTTCCAAGCGGTAAAATGCCCAAGGGAAGGCGATTGGTTGGTGAACATGCGGTGTATGATGTTGATGTGAGATTACAGGGAGAGATTCAACCGCAGCTGGAGGTGACTCCGATTACCAAGTACGGCTCGGATCCTCAGCTTGTACTCGGTAGGCAAATTGCTGTGAATAAGGTCTACATTTGCTATGGATTGAAAGGAGGAAGCATTCGTGTTCTCAATATCAACACAGCATTGAGGTCTCTGTTCCGTGGCCATTCTCAGAGAGTAACGGACATGGCTTTCTTTGCCGAAGATGTTCATCTCTTAGCTAGTGTTAGTCTAGATGGAAAAGTTTTTGTGTGGAAAATTTCCGAAGGATCTGAGGGAGATGAACAATCCCAGATAACTGGAAAGATAGTTGTTGCTCTTCAGATACTTGGAGAGGAAGACACCAAACATCCACGTGTCTGTTGGCACTGCCACAAACAGGAAATTTTGGTAGTTTCAATTGGTAAACATGTGCTGCGAATCGATACTACAAAAGTTGGCAGAGGTGAAGTGTTCTCTGCCGAGGCACCTCTCCAGTGTCATCTTGATAAACTAATTGATGGTGTTCAGATTGTGGGTAAGCATGATGGAGAAGTGACAGATTTGTCAATGTGCCAATGGATGACCACGCGCCTGGTTTCTTCTTCAGTTGATGGCACGGTTAAGATATGGCAAGATCGTAAGACACAACCACTTGTAGTATTGAGACCTCATGATGGACTTCCAGTCAATTCTGCCATATTTGTGACATCCCCGGAAAGACCTGATCACATCATACTTATCACGGGGGGTCCTCTAAATCGAGAAATCAAGATTTGGGTCTCCGCTGGGGAAGAAGGGTGGCTTCTACCCGCTGATACTGAATCGTGGAGATGTACCCAGACACTTGATTTGAAAAGTTCAACTGAGCCACAAGCTGAAAAGGCATTTTTCAACCAAGTCATAGCATTGTCTGAAGCAGGCCTGCTTTTGCTTGCAAATGCGAGAAGGAACGCCATATATTCCGTGCATTTGGACTATGGCTCATCTCCAGTGGAAACGCTGATGGATTACTTGTCCGAGTTTACAGTCACTATGCCTATATTGAGTTTTATTGGGACAAATGATCACCCAGAAGAACCATTTGTTAAAGTGTATTGTGTTCAGACTCTAGCAATCCAGCAGTATACATTAGACTTATTCTTGTGCATGCCACCTCCAAGAGAGAATGTGGGTTTTGAGAAGTCAGATTCTACTGTGTCACGGGAGGCAAACCTTGTTGAAAGCACGTTAGAAACATCTGGAATGAAGCCTACCGAATTACCTTCAGTTGGTTCAGTGCCTAAACCATCTATTTTAGTGAATAGATCGGAAAATGCTAATATGTTGAGTTTTCCAGCGGGCCCTGCATCAGCGGGGATCACACCACCAGCAATTGTTCCACCCAACGGTGAGCCTAAAACTTCTGGGATGCCTTCTGAGACCAGTGATGTAGATTCTGCGTATGCTCCTTCACCTCAACTTCCTCTAAGCCCCAGACTATCAAGTAAACTTTCTGGCTATCACACTCCTGTAGAAGCGTTTGAGCAAGTGCTACCACATCATAAGCTTGGTGGCAAAACAAGTTCTGCTGATTATTTTTATGTGAGGCAAACTGATGATGTTGGAGGAAGAAATTTGGATGTGTCTTCTGTCGAGGAAAACTGTAGAAGCAAGGACACGAATGTTACACCTGATGATGATGTGTCTGGGATTCGAAGCCCGTCAGCTTTTTTCAAACAGCCCACTCATCTCGTAACTCCTTCAGAGATATTGATGGGCGTTTCTTCCACTGAAGCCTCCATTACTACTGAAGACAAGAGGGATAGAGATGCAAATATTGAGGAAGTGAATAATGATGCAAGAGGCTTAGAAGTTGAGTTGAAAGAAGTAGGCGAAGCACAGACTTCGCAGAATGGTGAAATTAACTATCACGAAACAACTGAGAATCACACTTCAGAAAGTAGAGAAAATATCTTCTGCTCACAGGCTTCAAATCTCAGCACTGAGATGGCAAGAGACCGTCATCCTATTACAGAGGGAAGTGCCATTCCTGGGGATTCTATGGCTTATGGACAACCTTTACAAGCTGGAGATGAAAGGGGTCTTGACTCAAGAGATGTCTCTGCAAAGCTTCCTGAGTCGGGTTCATCTAGTGGGTTAGTAGCTACAAATAGCAAAGGAAAGAAGCAGAAGGCGAAAAATTCACAGGGTCCTGGGTTGTCATCTACATCCTCAAATGTTGCTAATCTGGCTGACTCCTTCAATGAGCAAAGTCAGAGTTTAAATCATCCCATGGCAGATTTACTTCCTCAGTTGTTAGCATTGCAAGAAACAATGACTCAGGTAATGGCTTCGCAGAAGGAGATGCAGAGACAACTATCAAATGCTGTCACTGGCCCTATCGTAAAAGAAGGTAAAAAACTAGAAGTTGCCTTAGGGAGAATGATTGAGAAATCCAGCAAGTCAAATGCTGATGCTCTATGGGCCCACTTCCAAGAGGAGGCTGTTAAGAATGAAAAGGCATTACGTGACCATGGCCAGCAAATTATGAATGAAACGACAAACTTCACGAGTAAAGAGTTAAATGCCATGTTTGAGAAAACGATGAAGAAGGAATTTGCTTCAGTTGGTCCAACCCTAGCACGTGTAGTAACTCCAGTTATTGAAAAAACTGTATCTTCTGCAATCACAGAGTCCTTCCAGAGAGGAATTGGTGACAAAGCAGTCAATCAGCTTGAAAAATCTGTTAATTCAAAGCTTGAAACAACCGTAGCCAGGCAGATTCAAGCCCAATTTCAGACATCTGGCAGACAAGTCCTGCAGGAAGGTCTTAGGTCAAGTATGGAGTCCTCAGTCATACCTTCCTTTGAGAGGTCATGCAAAACCATGTTTGAGCAAGTAGACTCAACCTTACAGAAAGGAATTGGTAAGCACACGAGCGCAACACAGCAACGGATTGACTCTGGACAATCTCAGCTTGCTCATACTCTGAGGGAAACCATTAGTTCTGCATCATCAGTTACTCAAGCCCTAAATCGTGAATTAGCCGAGAGTCAAAGGAATCGCTTAGCTCTCACAGCTGCTGGATCAAATCCCTTGGTTACTCAACTAAGTAACGGGCCTTTAGGTGCTCTTCTTGAAAAGGTTGAAGCACCTATGGACCCAACAACAGAGCTATCAAGGTTGATATCTGAACGCAAGTACGAAGAATCTTTCACATCAGCTCTACAAAGAAGCGATGTCTCTATAGTATCATGGCTTTGCTCACAGGTGGATCTTCGTGGACTACTGGCGATGAATCCGCTTCCGCTGAGCCAAGGTGTGCTTCTTTCACTGCTGCAGCAGTTAGCTTGTGACATAAGCACGGACACATCCCGTAAGCTAGGTTGGATGACTGATGTGGTTACAGCCATAAACCCATCAGATCAGATGATAGCGGTCCATGCTCGCCCAATCTTTGAACAAGTTTATCAGATTTTGCACCATCACCGTAACGCACCAGGCAGCGACGTCTCTGCCGTCAGACTAATAATGCACGTCATCAACTCTTTACTTATGAGCTGCAAATGA
Protein Sequence
- >AT3G13290.1
MASSPGNTNPHNPPPFDLGTIFKPSSNPYPPPTGPFLNNQYNQQLYAPPGIAAQPSPVNQTQQDVSSSSSATNLQPQRTLSYPTPPLNPQSPRVNHNPGTHILALLNNGGAVANQEPSHHNEIARAFPGGSGPIHVPSGKMPKGRRLVGEHAVYDVDVRLQGEIQPQLEVTPITKYGSDPQLVLGRQIAVNKVYICYGLKGGSIRVLNINTALRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKISEGSEGDEQSQITGKIVVALQILGEEDTKHPRVCWHCHKQEILVVSIGKHVLRIDTTKVGRGEVFSAEAPLQCHLDKLIDGVQIVGKHDGEVTDLSMCQWMTTRLVSSSVDGTVKIWQDRKTQPLVVLRPHDGLPVNSAIFVTSPERPDHIILITGGPLNREIKIWVSAGEEGWLLPADTESWRCTQTLDLKSSTEPQAEKAFFNQVIALSEAGLLLLANARRNAIYSVHLDYGSSPVETLMDYLSEFTVTMPILSFIGTNDHPEEPFVKVYCVQTLAIQQYTLDLFLCMPPPRENVGFEKSDSTVSREANLVESTLETSGMKPTELPSVGSVPKPSILVNRSENANMLSFPAGPASAGITPPAIVPPNGEPKTSGMPSETSDVDSAYAPSPQLPLSPRLSSKLSGYHTPVEAFEQVLPHHKLGGKTSSADYFYVRQTDDVGGRNLDVSSVEENCRSKDTNVTPDDDVSGIRSPSAFFKQPTHLVTPSEILMGVSSTEASITTEDKRDRDANIEEVNNDARGLEVELKEVGEAQTSQNGEINYHETTENHTSESRENIFCSQASNLSTEMARDRHPITEGSAIPGDSMAYGQPLQAGDERGLDSRDVSAKLPESGSSSGLVATNSKGKKQKAKNSQGPGLSSTSSNVANLADSFNEQSQSLNHPMADLLPQLLALQETMTQVMASQKEMQRQLSNAVTGPIVKEGKKLEVALGRMIEKSSKSNADALWAHFQEEAVKNEKALRDHGQQIMNETTNFTSKELNAMFEKTMKKEFASVGPTLARVVTPVIEKTVSSAITESFQRGIGDKAVNQLEKSVNSKLETTVARQIQAQFQTSGRQVLQEGLRSSMESSVIPSFERSCKTMFEQVDSTLQKGIGKHTSATQQRIDSGQSQLAHTLRETISSASSVTQALNRELAESQRNRLALTAAGSNPLVTQLSNGPLGALLEKVEAPMDPTTELSRLISERKYEESFTSALQRSDVSIVSWLCSQVDLRGLLAMNPLPLSQGVLLSLLQQLACDISTDTSRKLGWMTDVVTAINPSDQMIAVHARPIFEQVYQILHHHRNAPGSDVSAVRLIMHVINSLLMSCK