Information report for AT3G13220
Gene Details
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Functional Descriptions
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- SALK_062317 — Male sterile.Abnormal pollen wall development.
- SALK_062317C — Mutant plants had very small siliques, showing very low fertility. The the anther locules turned brown upon maturity and released fewer pollen grains than wildtype plants.
Functional Keywords
Literature and News
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Inventory and comparative analysis of rice and Arabidopsis ATP-binding cassette (ABC) systems. DOI: 10.1016/j.jmb.2004.07.093 ; PMID: 15381434
- Regulation of Arabidopsis tapetum development and function by DYSFUNCTIONAL TAPETUM1 (DYT1) encoding a putative bHLH transcription factor. DOI: 10.1242/dev.02463 ; PMID: 16831835
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DOI: 10.1093/dnares/dsl013 ; PMID: 17164256
- Plant ABC proteins–a unified nomenclature and updated inventory. DOI: 10.1016/j.tplants.2008.02.001 ; PMID: 18299247
- The ABORTED MICROSPORES regulatory network is required for postmeiotic male reproductive development in Arabidopsis thaliana. DOI: 10.1105/tpc.109.071803 ; PMID: 20118226
- ATP-binding cassette transporter G26 is required for male fertility and pollen exine formation in Arabidopsis. DOI: 10.1104/pp.110.161968 ; PMID: 20732973
- An ABCG/WBC-type ABC transporter is essential for transport of sporopollenin precursors for exine formation in developing pollen. DOI: 10.1111/j.1365-313X.2010.04412.x ; PMID: 21223384
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- The DYT1-interacting proteins bHLH010, bHLH089 and bHLH091 are redundantly required for Arabidopsis anther development and transcriptome. DOI: 10.1111/tpj.12942 ; PMID: 26216374
- Slowing development restores the fertility of thermo-sensitive male-sterile plant lines. DOI: 10.1038/s41477-020-0622-6 ; PMID: 32231254
- IMPERFECTIVE EXINE FORMATION (IEF) is required for exine formation and male fertility in Arabidopsis. DOI: 10.1007/s11103-020-01114-8 ; PMID: 33481140
- Loss of THIN EXINE2 disrupts multiple processes in the mechanism of pollen exine formation. DOI: 10.1093/plphys/kiab244 ; PMID: 34618131
Gene Resources
Homologs
- Beta vulgaris BVRB_4g090810
- Cicer arietinum Ca_09740, Ca_14848
- Lotus japonicus LjContig00081g0009877, Lj6g0002997
- Lupinus albus Lalb_Chr10g0107501, Lalb_Chr20g0114061
- Oryza sativa OsABCG15
Sequences
cDNA Sequence
- >AT3G13220.1
ATGGAGATCAGAAGATCAACAGAAGAAGTTGAAGAGAATCATGTAATGCAGATTACAGGAAGCAATGGCATAGTTCACAACATGGAGTTCATGCCACAAGCTTACCTCAGAAACCAATACTCATCCGAGATTGACATTGATGAAGAGTTCGTTTCCACTTATCCTCTCGAAGATGCCCCTCTTCCCATCTTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAACAGTCATGCTAGCTCAGCAAACCTGGTGAAAACAATGGTGTCAAAGGTGGTAACACATACAAATCCGGATCCAGATGGATACAAGCACATTTTGAAAGGCATAACAGGAAGCACAGGTCCTGGCGAAATCCTTGCGCTAATGGGGCCTTCGGGTAGTGGCAAAACAACTCTTCTGAAGATAATGGGAGGAAGATTGACAGATAATGTCAAGGGGAAGCTTACCTATAATGACATTCCTTACAGTCCATCTGTTAAGAGGAGAATTGGCTTTGTGACGCAAGACGATGTTCTGTTGCCACAACTTACTGTGGAAGAGACCTTGGCATTTGCTGCGTTTTTAAGACTTCCAAGTAGCATGAGCAAGGAACAAAAATACGCCAAAATAGAGATGATCATCAAAGAGCTCGGCCTCGAAAGATGCCGTCGGACAAGAGTTGGAGGAGGTTTTGTCAAGGGAATATCAGGTGGAGAAAGAAAAAGAGCAAGTATAGCTTATGAGATTCTCGTAGATCCTTCTCTGTTGCTTCTAGACGAGCCAACTTCTGGACTTGACTCCACTTCTGCCACCAAACTTCTTCATATTCTTCAAGGAGTAGCTAAGGCAGGCAGGACCGTTATAACGACAATTCACCAACCATCAAGCAGAATGTTTCACATGTTTGACAAGCTCTTACTGATATCAGAAGGACACCCTGCCTTTTACGGCAAAGCCAGAGAATCTATGGAGTATTTCTCATCTTTGAGAATCTTACCTGAGATTGCAATGAACCCAGCAGAGTTCTTGCTAGACTTGGCAACCGGACAAGTTTCAGACATTAGTCTACCCGACGAACTATTGGCTGCCAAAACTGCACAGCCTGATTCTGAGGAAGTTTTACTCAAATACTTGAAACAAAGGTACAAGACAGACTTGGAGCCAAAAGAGAAGGAAGAAAATCATAGAAATAGAAAGGCCCCAGAGCATCTTCAAATAGCAATCCAAGTGAAGAAGGACTGGACTCTTTCATGGTGGGATCAGTTCTTGATTCTTTCAAGAAGAACATTCAGAGAGCGGCGTAGAGATTACTTTGATAAGCTAAGGCTAGTTCAATCACTTGGTGTGGCCGTCGTGTTGGGTCTTCTCTGGTGGAAGTCAAAGACAGATACAGAGGCTCACCTTAGAGACCAAGTTGGTTTGATGTTCTATATCTGCATCTTCTGGACATCGTCATCACTCTTTGGAGCAGTATACGTGTTCCCCTTCGAGAAGATCTACCTGGTGAAAGAAAGAAAAGCAGAAATGTACAGACTTAGTGTGTATTACGTATGCAGTACACTATGTGATATGGTGGCACACGTTTTGTACCCGACATTCTTCATGATCATTGTCTACTTCATGGCTGAGTTCAATAGGAACATCCCCTGCTTCCTTTTCACCGTGTTGACAATACTACTGATAGCCATCACTAGCCAAGGTGCAGGAGAGTTCTTAGGAGCTTCAGTATTGAGCATTAAGAGAGCTGGTATGATCGCCTCTTTGGTACTAATGCTGTTTCTACTAACCGGAGGTTACTATGTCCAGCACATACCAAAATTCATGCAGTGGTTGAAGTACTTGTCATTCATGCACTACGGCTTCAGGCTACTTTTGAAAGTTCAATACTCAGCTGACCAACTTTTCGAATGTGGGAGCAAAGGCGGCTGCAGGACACTGCAAAGCTCATCGTCCTTTGACACGATAAACTTGAATGGCGGCTTACAAGAACTGTGGGTTCTGCTTGCCATGGCATTCGGCTACCGTCTCTGTGCATACTTTTGCCTTCGCAAGAAAATAAGCATTTGCCATCTTTGATAACAAGATCGAAACAAGAAAATGACCAAAGAAGTTCATATAGCTATCTCCACTATTTCCAATTTTGAAAGATGAATAAGAGCTAAGCAGGAATCTGGGATATAAAGCATTAAAGCCATATGCATAAGCTTTTTATATAAATCTAATGTATAACTAAATCTACAAATATCATTAATATCAACACCGCAAGCGACATAATCACCTATGTAAGTACATTATGCTATTTTTTAAGCTGGAAGAGTATTGCATAACAACATTATGTTAACCACACTAGACGCATTCCCCAGCTTTAA
CDS Sequence
- >AT3G13220.1
ATGGAGATCAGAAGATCAACAGAAGAAGTTGAAGAGAATCATGTAATGCAGATTACAGGAAGCAATGGCATAGTTCACAACATGGAGTTCATGCCACAAGCTTACCTCAGAAACCAATACTCATCCGAGATTGACATTGATGAAGAGTTCGTTTCCACTTATCCTCTCGAAGATGCCCCTCTTCCCATCTTTCTCAAGTTTGAAGATGTGGAGTATAAGGTGAGAAACAGTCATGCTAGCTCAGCAAACCTGGTGAAAACAATGGTGTCAAAGGTGGTAACACATACAAATCCGGATCCAGATGGATACAAGCACATTTTGAAAGGCATAACAGGAAGCACAGGTCCTGGCGAAATCCTTGCGCTAATGGGGCCTTCGGGTAGTGGCAAAACAACTCTTCTGAAGATAATGGGAGGAAGATTGACAGATAATGTCAAGGGGAAGCTTACCTATAATGACATTCCTTACAGTCCATCTGTTAAGAGGAGAATTGGCTTTGTGACGCAAGACGATGTTCTGTTGCCACAACTTACTGTGGAAGAGACCTTGGCATTTGCTGCGTTTTTAAGACTTCCAAGTAGCATGAGCAAGGAACAAAAATACGCCAAAATAGAGATGATCATCAAAGAGCTCGGCCTCGAAAGATGCCGTCGGACAAGAGTTGGAGGAGGTTTTGTCAAGGGAATATCAGGTGGAGAAAGAAAAAGAGCAAGTATAGCTTATGAGATTCTCGTAGATCCTTCTCTGTTGCTTCTAGACGAGCCAACTTCTGGACTTGACTCCACTTCTGCCACCAAACTTCTTCATATTCTTCAAGGAGTAGCTAAGGCAGGCAGGACCGTTATAACGACAATTCACCAACCATCAAGCAGAATGTTTCACATGTTTGACAAGCTCTTACTGATATCAGAAGGACACCCTGCCTTTTACGGCAAAGCCAGAGAATCTATGGAGTATTTCTCATCTTTGAGAATCTTACCTGAGATTGCAATGAACCCAGCAGAGTTCTTGCTAGACTTGGCAACCGGACAAGTTTCAGACATTAGTCTACCCGACGAACTATTGGCTGCCAAAACTGCACAGCCTGATTCTGAGGAAGTTTTACTCAAATACTTGAAACAAAGGTACAAGACAGACTTGGAGCCAAAAGAGAAGGAAGAAAATCATAGAAATAGAAAGGCCCCAGAGCATCTTCAAATAGCAATCCAAGTGAAGAAGGACTGGACTCTTTCATGGTGGGATCAGTTCTTGATTCTTTCAAGAAGAACATTCAGAGAGCGGCGTAGAGATTACTTTGATAAGCTAAGGCTAGTTCAATCACTTGGTGTGGCCGTCGTGTTGGGTCTTCTCTGGTGGAAGTCAAAGACAGATACAGAGGCTCACCTTAGAGACCAAGTTGGTTTGATGTTCTATATCTGCATCTTCTGGACATCGTCATCACTCTTTGGAGCAGTATACGTGTTCCCCTTCGAGAAGATCTACCTGGTGAAAGAAAGAAAAGCAGAAATGTACAGACTTAGTGTGTATTACGTATGCAGTACACTATGTGATATGGTGGCACACGTTTTGTACCCGACATTCTTCATGATCATTGTCTACTTCATGGCTGAGTTCAATAGGAACATCCCCTGCTTCCTTTTCACCGTGTTGACAATACTACTGATAGCCATCACTAGCCAAGGTGCAGGAGAGTTCTTAGGAGCTTCAGTATTGAGCATTAAGAGAGCTGGTATGATCGCCTCTTTGGTACTAATGCTGTTTCTACTAACCGGAGGTTACTATGTCCAGCACATACCAAAATTCATGCAGTGGTTGAAGTACTTGTCATTCATGCACTACGGCTTCAGGCTACTTTTGAAAGTTCAATACTCAGCTGACCAACTTTTCGAATGTGGGAGCAAAGGCGGCTGCAGGACACTGCAAAGCTCATCGTCCTTTGACACGATAAACTTGAATGGCGGCTTACAAGAACTGTGGGTTCTGCTTGCCATGGCATTCGGCTACCGTCTCTGTGCATACTTTTGCCTTCGCAAGAAAATAAGCATTTGCCATCTTTGA
Protein Sequence
- >AT3G13220.1
MEIRRSTEEVEENHVMQITGSNGIVHNMEFMPQAYLRNQYSSEIDIDEEFVSTYPLEDAPLPIFLKFEDVEYKVRNSHASSANLVKTMVSKVVTHTNPDPDGYKHILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDNVKGKLTYNDIPYSPSVKRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGLERCRRTRVGGGFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAKAGRTVITTIHQPSSRMFHMFDKLLLISEGHPAFYGKARESMEYFSSLRILPEIAMNPAEFLLDLATGQVSDISLPDELLAAKTAQPDSEEVLLKYLKQRYKTDLEPKEKEENHRNRKAPEHLQIAIQVKKDWTLSWWDQFLILSRRTFRERRRDYFDKLRLVQSLGVAVVLGLLWWKSKTDTEAHLRDQVGLMFYICIFWTSSSLFGAVYVFPFEKIYLVKERKAEMYRLSVYYVCSTLCDMVAHVLYPTFFMIIVYFMAEFNRNIPCFLFTVLTILLIAITSQGAGEFLGASVLSIKRAGMIASLVLMLFLLTGGYYVQHIPKFMQWLKYLSFMHYGFRLLLKVQYSADQLFECGSKGGCRTLQSSSSFDTINLNGGLQELWVLLAMAFGYRLCAYFCLRKKISICHL