Information report for AT3G13200
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- cwc15-2 — Seedlings and adult plants strongly reduced in size, stunted primary roots and cotyledon defects ranging from monocots or asymmetrically positioned cotyledons to seedlings with three cotyledons. Altered splicing patterns in other genes.
Functional Keywords
Literature and News
- ROXY1 and ROXY2, two Arabidopsis glutaredoxin genes, are required for anther development. DOI: 10.1111/j.1365-313X.2007.03375.x ; PMID: 18036205
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identifying essential genes in Arabidopsis thaliana. DOI: 10.1016/j.tplants.2008.06.003 ; PMID: 18684657
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
Gene Resources
- UniProt: Q9LK52
- EMBL: AP000375, CP002686
- AlphaFoldDB: Q9LK52
- EnsemblPlants: AT3G13200.1
- Gramene: AT3G13200.1
- KEGG: ath:AT3G13200
Sequences
cDNA Sequence
- >AT3G13200.1
ATAAATAAAAGGCTTGTTTTTTTATTTTTCACTTTGTTCTCTCTCTCTCTCGTAACACGCCTGAGAGTTCTCGTCGTCCTTATCTCGATCTTGGTTGATTCGCTCTCCGATCGGAAATTAGGGCTTTTGTTTTCTGAAGATGACGACTGCAGCACGACCAACCTGGGCTCCAGCTAAGGGAGGTAACGAGCAAGGTGGTGCTCGGATCTTTGGTCCATCTCAGAAGTATTCGTCCCGTGATGTCGCCGCTCACACAACTTTAAAGCCAAGGAGGGAAGGGCAACACACTCAAGAGGAACTCCAGAAGATAAATCTTCGTGATGAGCTTGAAGAGCGTGAGAGGAGACATTTCTCATCAAAAGACAAATCATACAATGATGATAGAGATCGCAGAAGAGGAAGTCAGCTTTTACTGGAAGACTCGAAAAGGGATCCTGAAGAGCGGATTATTCCTCGCAGTGTAGATGCTGATGATTCTGATGTTGATATCAAAAGTGACGATGATAGTGATGACGAAAGTGACGATGATGATGAGGACGACACTGAAGCTCTTATGGCGGAACTCGACCAGATAAAGAAAGAAAGAGTGGAAGAGAGGCTCAGGAAGGAAAAAGAGCAGCAGATGGAAGAGCTAAACGCTAAGGAAGAGGAACTTCTCAAAGGAAACCCATTGCTTAATACTCCAACGTCTTTTAGCGTCAAAAGGAGGTGGGATGATGATGTTGTATTCAAAAACCAGGCACGTGGTGAAATGAAAGCTCCTAAGCGCTTCATCAATGATACAATCAGGAATGACTTCCACAGAAAATTCCTGCATAGATACATGAAGTGATTGTTTGTCAAGAGTGTTATTGCTACTTCTTTGTATGATGATTATGACTAAAAGCTTTTATTCTGTCTGGAATTACGATGTCTCTGTACTCAAACAACAAATGTTTTTAAGCTTTATATCAAAAACTTATGCATTTGATTTTAATGTAATATCTCACAGATTCCTGATTATCTCTTATTCATCACTAACACAATGAG
CDS Sequence
- >AT3G13200.1
ATGACGACTGCAGCACGACCAACCTGGGCTCCAGCTAAGGGAGGTAACGAGCAAGGTGGTGCTCGGATCTTTGGTCCATCTCAGAAGTATTCGTCCCGTGATGTCGCCGCTCACACAACTTTAAAGCCAAGGAGGGAAGGGCAACACACTCAAGAGGAACTCCAGAAGATAAATCTTCGTGATGAGCTTGAAGAGCGTGAGAGGAGACATTTCTCATCAAAAGACAAATCATACAATGATGATAGAGATCGCAGAAGAGGAAGTCAGCTTTTACTGGAAGACTCGAAAAGGGATCCTGAAGAGCGGATTATTCCTCGCAGTGTAGATGCTGATGATTCTGATGTTGATATCAAAAGTGACGATGATAGTGATGACGAAAGTGACGATGATGATGAGGACGACACTGAAGCTCTTATGGCGGAACTCGACCAGATAAAGAAAGAAAGAGTGGAAGAGAGGCTCAGGAAGGAAAAAGAGCAGCAGATGGAAGAGCTAAACGCTAAGGAAGAGGAACTTCTCAAAGGAAACCCATTGCTTAATACTCCAACGTCTTTTAGCGTCAAAAGGAGGTGGGATGATGATGTTGTATTCAAAAACCAGGCACGTGGTGAAATGAAAGCTCCTAAGCGCTTCATCAATGATACAATCAGGAATGACTTCCACAGAAAATTCCTGCATAGATACATGAAGTGA
Protein Sequence
- >AT3G13200.1
MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQKINLRDELEERERRHFSSKDKSYNDDRDRRRGSQLLLEDSKRDPEERIIPRSVDADDSDVDIKSDDDSDDESDDDDEDDTEALMAELDQIKKERVEERLRKEKEQQMEELNAKEEELLKGNPLLNTPTSFSVKRRWDDDVVFKNQARGEMKAPKRFINDTIRNDFHRKFLHRYMK