Information report for AT3G12977
Gene Details
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Functional Descriptions
- GO:0003677 — enables — DNA binding
- GO:0009831 — acts upstream of or within — plant-type cell wall modification involved in multidimensional cell growth
- GO:0010628 — acts upstream of or within — positive regulation of gene expression
- GO:0005634 — located in — nucleus
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0043565 — enables — sequence-specific DNA binding
- nac1l-1 — Seed germination defect.Delayed rupture of testa. Endosperm cells do not expand.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q9LSI1
- EMBL: AB026645, CP002686
- AlphaFoldDB: Q9LSI1
- EnsemblPlants: AT3G12977.1
- Gramene: AT3G12977.1
- KEGG: ath:AT3G12977
- Orthologous matrix: REIMKMP
- ExpressionAtlas: AT3G12977
- InterPro: IPR003441, IPR036093
- PANTHER: PTHR31744, PTHR31744:SF120
- SUPFAM: SSF101941
- PROSITE: PS51005
- Gene3D: 2.170.150.80
- SWISS-MODEL: Q9LSI1
Homologs
- Brassica napus GSBRNA2T00137735001, GSBRNA2T00028210001, GSBRNA2T00023746001, GSBRNA2T00004489001
- Brassica oleracea XP_013584372.1, XP_013626498.1
- Brassica rapa XP_009135268.1, XP_009146563.1, XP_009146562.1
- Raphanus raphanistrum RrC6133_p3
Sequences
cDNA Sequence
- >AT3G12977.1
ACTGCTTCTCCTTTATTTTCAAACAGACAAAAAAAAAACAAGAAGTCTCAGCCGAATCAAGACCTATAAATTTATTTTGGCATTTAAAAGAAATAGTGGTTCGAAAATAAAAATGTTATAATTACATGGAGGATTACATATATTGAAGTTGACTTTATGGTTTGCTGATTATTTATACCACCGTTCTTCTGTCCTCTCGTTCACAAAACTCCCGATATTCTTCTCCATCCCTCTCTCCCCTCTTTACATAGTACTTACATCAACGTATCATCAACAACAAGTAAACGAATCTTCAGATATTAATAGAAATGGAGGAGACAGAAAAGAATAAGGGCAGCATAAGTATGGTTGAGGCTAATCTACCTCCTGGTTTTAGATTCCATCCTAGAGACGACGAGCTCGTCTGTGACTACTTAATGAGAAGAACCGTTCGCAGCCTCTATCAACCAGTTGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCAAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACCGTAAATACGCAACAGGCTACAGAACAAACCGGGCTACGGCCACCGGTTATTGGAAAGCCACCGGGAAAGATAGAGCAATCCAAAGAAACGGTGGTCTTGTGGGTATGAGAAAGACACTTGTGTTTTACCGAGGTCGATCCCCTAAAGGTCGTAAAACTGATTGGGTCATGCATGAGTTTCGTCTCCAAGGAAAACTTCTTCACCACTCCCCTAATTCTCTCGAGGAAGAGTGGGTATTGTGTAGAGTTTTCCACAAGAACAGCAACGGAGCTGATATAGACGACATCACAAGGAGCTGCTCTGATGCAACAGCTTCTGCATTCATGGACTCTTACATCAACTTCGACCATCATCACATCATCAATCAGCATGTACCCTGCTTCTCCAATAATTTGTCACATAACCAAACCAACCAATCCGGTTTAATCTCCAAGAACTCCAGCCCATTGTTTAATGCTTCCCCTGATCAAATGATTCTCAGAACTTTGCTAAGTCAACTCACAAAAAAAGTCGAAGAATCACAGAGTCGTGGAGACGGAAGCTCAGAGAGCCAATTGACCGACATTGGCATCCCAAGCCATGCATGGAATTACTGATTATGAATAAGGCTTACCAGATATATCACTATGTATAAGTATCATATTCATGATTCGAAACAATTTATTCAACCCTCTTATGTAAACTGTTATACCATTATATTAGCAATCCAATCATATATAGTTGCTAAAAAAGCAAAAAATCATTAAATTTCTGTTATATAATATTTTATTTAC - >AT3G12977.2
ACTGCTTCTCCTTTATTTTCAAACAGACAAAAAAAAAACAAGAAGTCTCAGCCGAATCAAGACCTATAAATTTATTTTGGCATTTAAAAGAAATAGTGGTTCGAAAATAAAAATGTTATAATTACATGGAGGATTACATATATTGAAGTTGACTTTATGGTTTGCTGATTATTTATACCACCGTTCTTCTGTCCTCTCGTTCACAAAACTCCCGATATTCTTCTCCATCCCTCTCTCCCCTCTTTACATAGTACTTACATCAACGTATCATCAACAACAAGTAAACGAATCTTCAGATATTAATAGAAATGGAGGAGACAGAAAAGAATAAGGGCAGCATAAGTATGGTTGAGGCTAATCTACCTCCTGGTTTTAGATTCCATCCTAGAGACGACGAGCTCGTCTGTGACTACTTAATGAGAAGAACCGTTCGCAGCCTCTATCAACCAGTTGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCAAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACCGTAAATACGCAACAGGCTACAGAACAAACCGGGCTACGGCCACCGGTTATTGGAAAGCCACCGGGAAAGATAGAGCAATCCAAAGAAACGGTGGTCTTGTGGGTATGAGAAAGACACTTGTGTTTTACCGAGGTCGATCCCCTAAAGGTCGTAAAACTGATTGGGTCATGCATGAGTTTCGTCTCCAAGGAAAACTTCTTCACCACTCCCCTAATTCTCTCGAGGAAGAGTGGGTATTGTGTAGAGTTTTCCACAAGAACAGCAACGGAGCTGATATAGACGACATCACAAGGAGCTGCTCTGATGCAACAGCTTCTGCATTCATGGACTCTTACATCAACTTCGACCATCATCACATCATCAATCAGCATGTACCCTGCTTCTCCAATAATTTGTCACATAACCAAACCAACCAATCCGGTTTAATCTCCAAGAACTCCAGCCCATTGTTTAATGCTTCCCCTGATCAAATGATTCTCAGAACTTTGCTAAGTCAACTCACAAAAAAAGTCGAAGAATCACAGAGTCGTGGAGACGGAAGCTCAGAGAGCCAATTGACCGACATTGGCATCCCAAGCCATGCATGGAATTACTGATTATGAATAAGGCTTACCAGATATATCACTATGTATAAGTATCATATTCATGATTCGAAACAATTTATTCAACCCTCTTATGTAAACTGTTATACCATTATATTAGCAATCCAATCATATATAGTTGCTAAAAAAGCAAAAAATCATTAAATTTCTGTTATATAATATTTTATTTAC
CDS Sequence
- >AT3G12977.1
ATGGAGGAGACAGAAAAGAATAAGGGCAGCATAAGTATGGTTGAGGCTAATCTACCTCCTGGTTTTAGATTCCATCCTAGAGACGACGAGCTCGTCTGTGACTACTTAATGAGAAGAACCGTTCGCAGCCTCTATCAACCAGTTGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCAAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACCGTAAATACGCAACAGGCTACAGAACAAACCGGGCTACGGCCACCGGTTATTGGAAAGCCACCGGGAAAGATAGAGCAATCCAAAGAAACGGTGGTCTTGTGGGTATGAGAAAGACACTTGTGTTTTACCGAGGTCGATCCCCTAAAGGTCGTAAAACTGATTGGGTCATGCATGAGTTTCGTCTCCAAGGAAAACTTCTTCACCACTCCCCTAATTCTCTCGAGGAAGAGTGGGTATTGTGTAGAGTTTTCCACAAGAACAGCAACGGAGCTGATATAGACGACATCACAAGGAGCTGCTCTGATGCAACAGCTTCTGCATTCATGGACTCTTACATCAACTTCGACCATCATCACATCATCAATCAGCATGTACCCTGCTTCTCCAATAATTTGTCACATAACCAAACCAACCAATCCGGTTTAATCTCCAAGAACTCCAGCCCATTGTTTAATGCTTCCCCTGATCAAATGATTCTCAGAACTTTGCTAAGTCAACTCACAAAAAAAGTCGAAGAATCACAGAGTCGTGGAGACGGAAGCTCAGAGAGCCAATTGACCGACATTGGCATCCCAAGCCATGCATGGAATTACTGA - >AT3G12977.2
ATGGAGGAGACAGAAAAGAATAAGGGCAGCATAAGTATGGTTGAGGCTAATCTACCTCCTGGTTTTAGATTCCATCCTAGAGACGACGAGCTCGTCTGTGACTACTTAATGAGAAGAACCGTTCGCAGCCTCTATCAACCAGTTGTCTTGATCGACGTCGATCTTAACAAATGCGAGCCTTGGGACATTCCTCAAACGGCGAGAGTGGGAGGGAAAGAATGGTACTTTTACAGCCAAAAAGACCGTAAATACGCAACAGGCTACAGAACAAACCGGGCTACGGCCACCGGTTATTGGAAAGCCACCGGGAAAGATAGAGCAATCCAAAGAAACGGTGGTCTTGTGGGTATGAGAAAGACACTTGTGTTTTACCGAGGTCGATCCCCTAAAGGTCGTAAAACTGATTGGGTCATGCATGAGTTTCGTCTCCAAGGAAAACTTCTTCACCACTCCCCTAATTCTCTCGAGGAAGAGTGGGTATTGTGTAGAGTTTTCCACAAGAACAGCAACGGAGCTGATATAGACGACATCACAAGGAGCTGCTCTGATGCAACAGCTTCTGCATTCATGGACTCTTACATCAACTTCGACCATCATCACATCATCAATCAGCATGTACCCTGCTTCTCCAATAATTTGTCACATAACCAAACCAACCAATCCGGTTTAATCTCCAAGAACTCCAGCCCATTGTTTAATGCTTCCCCTGATCAAATGATTCTCAGAACTTTGCTAAGTCAACTCACAAAAAAAGTCGAAGAATCACAGAGTCGTGGAGACGGAAGCTCAGAGAGCCAATTGACCGACATTGGCATCCCAAGCCATGCATGGAATTACTGA
Protein Sequence
- >AT3G12977.1
MEETEKNKGSISMVEANLPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCEPWDIPQTARVGGKEWYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKTLVFYRGRSPKGRKTDWVMHEFRLQGKLLHHSPNSLEEEWVLCRVFHKNSNGADIDDITRSCSDATASAFMDSYINFDHHHIINQHVPCFSNNLSHNQTNQSGLISKNSSPLFNASPDQMILRTLLSQLTKKVEESQSRGDGSSESQLTDIGIPSHAWNY - >AT3G12977.2
MEETEKNKGSISMVEANLPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCEPWDIPQTARVGGKEWYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKTLVFYRGRSPKGRKTDWVMHEFRLQGKLLHHSPNSLEEEWVLCRVFHKNSNGADIDDITRSCSDATASAFMDSYINFDHHHIINQHVPCFSNNLSHNQTNQSGLISKNSSPLFNASPDQMILRTLLSQLTKKVEESQSRGDGSSESQLTDIGIPSHAWNY