Gene Details:

• Gene ID: AT3G12810
• Gene Symbol: chr13, PIE1, SRCAP
• Gene Name: PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1
• Description: SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11)
• TAIR Accession: locus:2087780
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G12810.1     AT3G12810.2

Plant Ontology Annotations:

• PO:0020144  — apical meristem — AM (exact), meristema apical (Spanish, exact), 頂端分裂組織 (Japanese, exact), primary meristem (related), promeristem (broad)
• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)

Gene Ontology:

• GO:0048441  — acts upstream of or within — petal development
• GO:0016514  — part of — SWI/SNF complex
• GO:0000812  — located in — Swr1 complex
• GO:0005634  — located in — nucleus
• GO:0009910  — acts upstream of or within — negative regulation of flower development
• GO:0005515  — enables — protein binding
• GO:0000812  — part of — Swr1 complex
• GO:0048451  — acts upstream of or within — petal formation
• GO:0046686  — acts upstream of or within — response to cadmium ion
• GO:0016887  — enables — ATP hydrolysis activity
• GO:0009505  — located in — plant-type cell wall
• GO:0042742  — acts upstream of or within — defense response to bacterium
• GO:0042393  — enables — histone binding

Germplasm Phenotype:

• pie1  — Altered flowering time, suppression of petal phenotypes in clf mutants

Function-related keywords:

• apical meristem ,  shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  hypocotyl ,  collective leaf structure

Literature:

• PIE1, an ISWI family gene, is required for FLC activation and floral repression in Arabidopsis.   DOI:  10.1105/tpc.012161 ;  PMID:  12837955
• Involvement of the Arabidopsis SWI2/SNF2 chromatin remodeling gene family in DNA damage response and recombination.   DOI:  10.1534/genetics.105.051664 ;  PMID:  16547115
• SEF, a new protein required for flowering repression in Arabidopsis, interacts with PIE1 and ARP6.   DOI:  10.1104/pp.106.092270 ;  PMID:  17142478
• Repression of flowering in Arabidopsis requires activation of FLOWERING LOCUS C expression by the histone variant H2A.Z.   DOI:  10.1105/tpc.106.048447 ;  PMID:  17220196
• Arabidopsis homologs of components of the SWR1 complex regulate flowering and plant development.   DOI:  10.1242/dev.001891 ;  PMID:  17470967
• Histone H2A.Z and homologues of components of the SWR1 complex are required to control immunity in Arabidopsis.   DOI:  10.1111/j.1365-313X.2007.03361.x ;  PMID:  17988222
• Resetting and regulation of Flowering Locus C expression during Arabidopsis reproductive development.   DOI:  10.1111/j.1365-313X.2008.03776.x ;  PMID:  19121105
• Leaf proteome responses of Arabidopsis thaliana exposed to mild cadmium stress.   DOI:  10.1016/j.jplph.2009.09.015 ;  PMID:  20005002
• Systematic identification of functional plant modules through the integration of complementary data sources.   DOI:  10.1104/pp.112.196725 ;  PMID:  22589469
• Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.   DOI:  10.1074/mcp.M114.040352 ;  PMID:  25561503
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Regulation of MicroRNA-Mediated Developmental Changes by the SWR1 Chromatin Remodeling Complex.   DOI:  10.1104/pp.16.00332 ;  PMID:  27208270
• Epigenetic regulation of miR396 expression by SWR1-C and the effect of miR396 on leaf growth and developmental phase transition in Arabidopsis.   DOI:  10.1093/jxb/erz285 ;  PMID:  31198943
• Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in Arabidopsis.   DOI:  10.1073/pnas.1906023116 ;  PMID:  31363048
• SWR1 Chromatin Remodeling Complex: A Key Transcriptional Regulator in Plants.   DOI:  10.3390/cells8121621 ;  PMID:  31842357
• A plant-specific SWR1 chromatin-remodeling complex couples histone H2A.Z deposition with nucleosome sliding.   DOI:  10.15252/embj.2019102008 ;  PMID:  32115743
• Actin-Related Protein 4 Interacts with PIE1 and Regulates Gene Expression in Arabidopsis.   DOI:  10.3390/genes12040520 ;  PMID:  33918349
• Chromatin Remodeling Complex SWR1 Regulates Root Development by Affecting the Accumulation of Reactive Oxygen Species (ROS).   DOI:  10.3390/plants12040940 ;  PMID:  36840288
• Arabidopsis cell wall proteome defined using multidimensional protein identification technology.   DOI:  10.1002/pmic.200500046 ;  PMID:  16287169

Sequences: