Gene Details:
- Gene ID: AT3G12740
- Gene Symbol: ALIS1
- Gene Name: ALA-interacting subunit 1
- Description: ALA-interacting subunit 1;(source:Araport11)
- TAIR Accession: locus:2087695
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005886 — is active in — plasma membrane
- GO:0015914 — acts upstream of or within — phospholipid transport
- GO:0005783 — is active in — endoplasmic reticulum
- GO:0005829 — located in — cytosol
- GO:0005794 — is active in — Golgi apparatus
- GO:0005794 — located in — Golgi apparatus
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Host origin of plastid solute transporters in the first photosynthetic eukaryotes. DOI: 10.1186/gb-2007-8-10-r212 ; PMID: 17919328
- The Arabidopsis P4-ATPase ALA3 localizes to the golgi and requires a beta-subunit to function in lipid translocation and secretory vesicle formation. DOI: 10.1105/tpc.107.054767 ; PMID: 18344284
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- ALA10, a Phospholipid Flippase, Controls FAD2/FAD3 Desaturation of Phosphatidylcholine in the ER and Affects Chloroplast Lipid Composition in Arabidopsis thaliana. DOI: 10.1104/pp.15.01557 ; PMID: 26620528
- Arabidopsis Flippases Cooperate with ARF GTPase Exchange Factors to Regulate the Trafficking and Polarity of PIN Auxin Transporters. DOI: 10.1105/tpc.19.00869 ; PMID: 32193204
- PUB11-Dependent Ubiquitination of the Phospholipid Flippase ALA10 Modifies ALA10 Localization and Affects the Pool of Linolenic Phosphatidylcholine. DOI: 10.3389/fpls.2020.01070 ; PMID: 32760418
Sequences:
cDNA Sequence
- >AT3G12740.1
TTTGTTTTTTGTTCTTGTTTCTTTTTGTCTCCCTAATTCAATATTCATGCTGTGATCATAAGTCCATAACAAAATAAAATACTTGGTCATGCATTAATCTCGTAATATTTAGTTGTATTTTTCAGCTTACAACAAAAAACAAAAAAACAAAAACAGAGCAGTAGTAGCAAAAAGAAAAAAGGGACAGTCTTTACCAATAGGAAACTGACACGATCCATCCTAAGAAACTTCAATTTTGGGGTTTCTCTTCGTCTTCTTCTTCTTCTTCTTCTAGATCGAGAGGGACATGGGTCTTACCAGCCGCCGTTGACGACTACGACGACCATTCTCTTCCTCTTCATCTTCTCTCCTTCTGCTTTTCTCTATTTCCTATTCTCTCCAAATTCACCATTTCCTTCCACCACTCAGAGATCTCCCTTTCTTATTAGCTATGTCTTCTTCTAACACGCCATCTTCTAGCGCCGCCGCTGCCGGATCGATAGATTCTTCCGCCGCCCGGAGAAATTCCAAGAGACCCAAGTATTCGAAATTTACTCAGCAGGAGCTTCCTGCTTGCAAACCAATTCTTACGCCTGGTTGGGTGATTTCAACGTTTTTGATCATTAGTGTTATCTTCATTCCCCTTGGTGTTATTTCTCTCTTTGCTTCTCAGGATGTTGTTGAGATCGTTGATCGGTATGATAGTGCATGCATACCTCTATCTGATAGGGCTAACAAGGTTGCATACATTCAAGGAACTGGAAATAAATCTTGTACCCGGACGCTAATTGTGCCTAAGCGTATGAAGCAGCCTATCTACGTATATTACCAGCTTGAGAACTTCTACCAGAATCACCGCAGGTATGTGAAAAGCCGAAGTGATTCGCAATTGAGAAGTGTGAAAGATGAGAATCAAATAGACGCATGCAAGCCTGAGGATGATTTTGGTGGGCAGCCAATTGTGCCATGTGGTCTAATTGCTTGGAGTCTCTTTAATGACACATACGTTCTATCAAGAAATAACCAGGGTTTAACGGTAAACAAGAAAGGAATTGCATGGAAGAGCGACAAGGAACACAAGTTTGGGAAAAATGTGTTTCCCAAGAACTTTCAGAAGGGCAATCTCACTGGTGGTGCCAGTCTAGATCCAAATAAACCATTGAGTGATCAAGAGGATCTGATCGTGTGGATGAGGACTGCTGCGTTGCCAACATTTAGAAAATTATACGGGAAGATAGAGAGTGACTTGGAGAAGGGTGAGAACATACAAGTGACTCTGCAGAACAACTACAACACATACAGTTTCAGTGGGAAGAAGAAGCTTGTTCTGTCAACAACAAGTTGGCTTGGTGGAAAGAACGACTTCCTCGGCATTGCTTACCTCACCGTTGGGGGAATCTGTTTCGTCTTGGCACTTGCATTTACCGTCATGTATCTTGTGAAACCCAGGCGACTCGGTGATCCTACCTACTTGTCGTGGAACAGAATTCCTGGAGGTCGTTAAACAGATGACTGCATCATCTGCGTATATAAATCTACTTATCTCTGGTTGTAATTTGATCCAAAATTGAAAGTGATGATCTTTTTTTTTTTAATATAGATGTGAAATGTATGTATGATGTTACAGTTGGAATATGCTCATTACATAGAATGATTGATGCTTCCTATCATGCTCATTACCTTTTCTCTTTTTCTCCCAAAAAGCAGTCCCTCGAATC
CDS Sequence
- >AT3G12740.1
ATGTCTTCTTCTAACACGCCATCTTCTAGCGCCGCCGCTGCCGGATCGATAGATTCTTCCGCCGCCCGGAGAAATTCCAAGAGACCCAAGTATTCGAAATTTACTCAGCAGGAGCTTCCTGCTTGCAAACCAATTCTTACGCCTGGTTGGGTGATTTCAACGTTTTTGATCATTAGTGTTATCTTCATTCCCCTTGGTGTTATTTCTCTCTTTGCTTCTCAGGATGTTGTTGAGATCGTTGATCGGTATGATAGTGCATGCATACCTCTATCTGATAGGGCTAACAAGGTTGCATACATTCAAGGAACTGGAAATAAATCTTGTACCCGGACGCTAATTGTGCCTAAGCGTATGAAGCAGCCTATCTACGTATATTACCAGCTTGAGAACTTCTACCAGAATCACCGCAGGTATGTGAAAAGCCGAAGTGATTCGCAATTGAGAAGTGTGAAAGATGAGAATCAAATAGACGCATGCAAGCCTGAGGATGATTTTGGTGGGCAGCCAATTGTGCCATGTGGTCTAATTGCTTGGAGTCTCTTTAATGACACATACGTTCTATCAAGAAATAACCAGGGTTTAACGGTAAACAAGAAAGGAATTGCATGGAAGAGCGACAAGGAACACAAGTTTGGGAAAAATGTGTTTCCCAAGAACTTTCAGAAGGGCAATCTCACTGGTGGTGCCAGTCTAGATCCAAATAAACCATTGAGTGATCAAGAGGATCTGATCGTGTGGATGAGGACTGCTGCGTTGCCAACATTTAGAAAATTATACGGGAAGATAGAGAGTGACTTGGAGAAGGGTGAGAACATACAAGTGACTCTGCAGAACAACTACAACACATACAGTTTCAGTGGGAAGAAGAAGCTTGTTCTGTCAACAACAAGTTGGCTTGGTGGAAAGAACGACTTCCTCGGCATTGCTTACCTCACCGTTGGGGGAATCTGTTTCGTCTTGGCACTTGCATTTACCGTCATGTATCTTGTGAAACCCAGGCGACTCGGTGATCCTACCTACTTGTCGTGGAACAGAATTCCTGGAGGTCGTTAA
Protein Sequence
- >AT3G12740.1
MSSSNTPSSSAAAAGSIDSSAARRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYDSACIPLSDRANKVAYIQGTGNKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNRIPGGR