Information report for AT3G12670
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0006241 — involved in — CTP biosynthetic process
- GO:0042802 — enables — identical protein binding
- GO:0044210 — involved in — de novo CTP biosynthetic process
- GO:0019856 — involved in — pyrimidine nucleobase biosynthetic process
- GO:0009733 — involved in — response to auxin
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0005829 — located in — cytosol
- +/ctps2-1 — Deviant germination pattern compared to the expected 1:2:1 ratio for WT:heterozygous:homozygous offspring. Siliques contain nearly 25% aborted seeds.
- +/ctps2-2 — Deviant germination pattern compared to the expected 1:2:1 ratio for WT:heterozygous:homozygous offspring. Siliques contain nearly 25% aborted seeds.
Functional Keywords
Literature and News
- Identification of genes required for embryo development in Arabidopsis. DOI: 10.1104/pp.104.045179 ; PMID: 15266054
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Dynamics of Arabidopsis thaliana soluble proteome in response to different nutrient culture conditions. DOI: 10.1002/elps.200500561 ; PMID: 16358359
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Monitoring expression profiles of Arabidopsis genes during cold acclimation and deacclimation using DNA microarrays. DOI: 10.1007/s10142-005-0014-z ; PMID: 16463051
- A novel high-throughput genetic screen for stress-responsive mutants of Arabidopsis thaliana reveals new loci involving stress responses. DOI: 10.1111/j.1365-313X.2006.02814.x ; PMID: 16856987
- Characterization of filament-forming CTP synthases from Arabidopsis thaliana. DOI: 10.1111/tpj.14032 ; PMID: 30030857
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
Gene Resources
- UniProt: Q9LTW8
- EMBL: AB024033, AC069474, AY093110
- AlphaFoldDB: Q9LTW8
- EnsemblPlants: AT3G12670.1
- Gramene: AT3G12670.1
- KEGG: ath:AT3G12670
- Orthologous matrix: FFEVADC
- ExpressionAtlas: AT3G12670
- InterPro: IPR004468, IPR017456, IPR017926
- PANTHER: PTHR11550, PTHR11550:SF0
- SUPFAM: SSF52317, SSF52540
- PROSITE: PS51257, PS51273
- Gene3D: 3.40.50.300, 3.40.50.880
- SWISS-MODEL: Q9LTW8
- Conserved Domain Database: cd01746, cd03113
Homologs
- Brassica napus GSBRNA2T00038789001
- Lactuca sativa Lsat_1_v5_gn_5_171580
Sequences
cDNA Sequence
- >AT3G12670.1
ATTTTGATTTGCTTTCAATTTGGGTTTAAATAAGAGTGAGGGTCTCGCAGGTTAGCTTATAAGCCGCCGCCTTGAAAATCCAGAAGGCCATTTTTGTTGGTGAAAGGTGAAGAAGAAGAAGCAGAGACAAAAACGATTATGAAGTACGTTTTGGTGACAGGAGGAGTGGTGAGTGGTCTTGGCAAAGGTGTCACTGCTAGTAGCATTGGACTTCTCCTTCAAGCATGTGGTCTTCGTGTCACTTCCATTAAAATTGATCCTTATCTTAACACTGATGCTGGAACAATGTCTCCGTTTGAGCATGGAGAAGTATTTGTATTGGATGATGGTGGAGAGGTGGATTTGGACCTTGGAAACTATGAACGATTTTTAGACAGTACATTGACCCGTGACAACAATATAACTACTGGAAAGATATACCAGTCAGTTATTGACAAGGAAAGGAAGGGGGACTACCTCGGAAGAACTGTACAGGTTGTTCCTCATGTTACTGACGCAATCCAAGAGTGGATTGAGCGTGTAGCTAATGTTCCTGTGGATGGAAAGGAAGGTCCTCCTGATGTTTGTGTCATCGAATTAGGCGGGACTATAGGTGATATTGAATCTATGCCCTTTATTGAGGCCCTTGGTCAATTCTCGTATAAAGTTGGACCTGGTAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTCAGTGTTGTTGGTGAACAGAAGACGAAGCCAACCCAGCATAGTGTGCGAGGCCTCAGGAGCCTTGGTTTGACACCAAATATCCTAGCATGTCGCAGCACGAAGGCACTTGAAGAAAATGTCAAGACAAAACTATCTCAATTTTGCCATGTGCCGGAAGTGAATATAGTAACGCTCTATGATGTTCCAAATATTTGGCACGTTCCTCTGCTTTTAAGGGATCAAAAAGCTCATGAAGCGATCCTAAGAGAGTTAAATCTTAGTAATGCTATAAAGCCTGACTTGACAGAATGGACTGCAAGGACTAAAATTTATGACACACTGCAAGACCCTGTGAGAATAGCTATGGTTGGAAAGTACACTGGCCTTACTGATTCTTACCTTTCCGTGTTGAAGGCCCTTTTGCATGCTTCTGTTGCATGTCACAAGAAGCTTGTCATAGAGTGGGTTGCAGCTAGTGACCTTGAAGAGATAACTGCACAAGAGACGCCAGATGTCCATAAGGCTGCATGGGATCTTTTGAAGGGTGCTGATGGTATCCTAGTACCAGGAGGGTTTGGTGATAGAGGAGTGCAAGGGAAGATACTTGCTACAAAGTACGCCCGTGAAAATCAAGTCCCTTTCCTTGGCATATGCCTGGGAATGCAGCTGGCTGTTGTTGAATTTGCCCGCTCCATTCTTGGTTTTCACGATGCAAACAGCACAGAGTTTGAACCAGAAACTTCAAGCCCTTGCATCATATTTATGCCAGAAGGATCCACAACTCATATGGGGGGCACAATGCGCTTAGGGTCAAGGAAGACTTACTTCCAGGTTGCTGATTGCAAGTCTGCCAAGCTGTACGGTAATGCAAAGTTTGTAGATGAGCGACACAGGCACAGATATGAGGTAAATCCAGATATGATATCAGAAATTGAGAAGGCTGGCCTCTCCTTTGTTGGGAAAGATGAGACTGGGCGTCGTATGGAGATTGTTGAACTACCAAGTCATCCATACTTTGTGGGTGCTCAGTTCCATCCTGAATTCAAGTCCAGACCTGGGAAACCTTCTGCATTGTTTCTAGGTCTTATCGCAGCAGCGTCTGGGTGTCTAGAATCAGTATTGCAAACAGGTGGCAAGGTGAACATAGTTTCGAAAAATGGAGTAGCCAATGGATCTGCAATGGGGAAAGTTCATCAGAACGGCAATGTCTATAGCAATGGAAACGGGCTTCACCACTGACTCGAGAAAGGAACAATTTTACTGCACTTTTTAAGCTTTTTTGCTTTTAATCAAAGCTTTCTTTAAGCAAGTCGACATGTATAGTCCCTGAGTTTTGTTTCCTTGTCTTGAAAACTTGTTTGGTTTCGTTGTTAGGGTTTGGGGAGAGACATGGATATGAATGTGCTTCCTGTTCTTGGGTTACTTTTTACCTTTCATAGCTAAAAACTAATAAAGATCTATATTCTAGTTTCTTCTGGCTCGTTGAATAATAACAAAAATTTGCAGTTTGTGTTTTGTAACTAATAGGTGCTTTCAACAACTTAAGTAAAGATAATATCCAAGAACTTTGAATGTTACATTTTTCTGTCTTTATTGTATCGCTCAATTTATTTTTCCCATAGAACTTGTCAAGCTAAATCTTTTCGTACTTTTTAGTGTTCATGTTTTTGCAGCCATCCGAGCTGCGTCTGTTTTATCTTTTTTTTTTGGCTTTCCTTACAAAAACCTGAACTGATCTGTTTAGTTCTTTGCACACTGTTTCTCATCGAAGTCGAGCCATGAACCACCAAATGAATGACATCAACAGCGTAAACGCGAAAGCGGGCTGAGAATCGTTTCTTGAAACTCCATTAGCTGAGCCGGCGTTTTCGGAAGGTTCATCAGCAGCAGCACCAGGAGCAGAGGATGGTGGCTCGTCAAAATCTTGACCATCATCATTAGGTGATTCTGCAGGGCGTGGTGGAGATGATACCGGTGACAAAGGAGAAGCAGTAGGTGCATTATCACCTTTAACATCAATCATTATAGCACTACTAATATGAAGCACAGAGATGTTAAACGGTAGTGCTGCTACAGTGTCTTGAAGCTGAGCATCAAGGCTAGACCCAGGAACCGCAGAACCAAACGCCACGTCTCCGTTTTTCATAACGGTTGCGTTCAAGAACCCTTGTTGGCCTCTGGCTAGACCGCTAGATTGGAAAAGAGTGGTGAGGAGTACTGTTTTCTTGCTCAGATTCTTGAGTTTCTTCTGGTCGTAGTAATCTAAAACAATGTGAAGGCTAAGGATTTTCTTGATGACGGAGGTTGGTTGGCCAGAGAGAGAGGAGAGTGCACCGTTGGAAACCACAAGGACGGTTATGGTTTGACGTTTGTTGATGGTAGAAGCGAGCTGAGTTTCGGAGAGAAGCTGGTTGAAATTTGAGAAATCATCGTGCTCGTTTAAGATGTTAGTGATGTTGAATGAATTTGATGAAGTGTAGAGGAATGTGGAAGCAAAAAAGAAGAAGAAGATTGTAAGTGAAGAAGACATTGTTGTGACTTGTGAATCGCTTGATGAGT
CDS Sequence
- >AT3G12670.1
ATGAAGTACGTTTTGGTGACAGGAGGAGTGGTGAGTGGTCTTGGCAAAGGTGTCACTGCTAGTAGCATTGGACTTCTCCTTCAAGCATGTGGTCTTCGTGTCACTTCCATTAAAATTGATCCTTATCTTAACACTGATGCTGGAACAATGTCTCCGTTTGAGCATGGAGAAGTATTTGTATTGGATGATGGTGGAGAGGTGGATTTGGACCTTGGAAACTATGAACGATTTTTAGACAGTACATTGACCCGTGACAACAATATAACTACTGGAAAGATATACCAGTCAGTTATTGACAAGGAAAGGAAGGGGGACTACCTCGGAAGAACTGTACAGGTTGTTCCTCATGTTACTGACGCAATCCAAGAGTGGATTGAGCGTGTAGCTAATGTTCCTGTGGATGGAAAGGAAGGTCCTCCTGATGTTTGTGTCATCGAATTAGGCGGGACTATAGGTGATATTGAATCTATGCCCTTTATTGAGGCCCTTGGTCAATTCTCGTATAAAGTTGGACCTGGTAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTCAGTGTTGTTGGTGAACAGAAGACGAAGCCAACCCAGCATAGTGTGCGAGGCCTCAGGAGCCTTGGTTTGACACCAAATATCCTAGCATGTCGCAGCACGAAGGCACTTGAAGAAAATGTCAAGACAAAACTATCTCAATTTTGCCATGTGCCGGAAGTGAATATAGTAACGCTCTATGATGTTCCAAATATTTGGCACGTTCCTCTGCTTTTAAGGGATCAAAAAGCTCATGAAGCGATCCTAAGAGAGTTAAATCTTAGTAATGCTATAAAGCCTGACTTGACAGAATGGACTGCAAGGACTAAAATTTATGACACACTGCAAGACCCTGTGAGAATAGCTATGGTTGGAAAGTACACTGGCCTTACTGATTCTTACCTTTCCGTGTTGAAGGCCCTTTTGCATGCTTCTGTTGCATGTCACAAGAAGCTTGTCATAGAGTGGGTTGCAGCTAGTGACCTTGAAGAGATAACTGCACAAGAGACGCCAGATGTCCATAAGGCTGCATGGGATCTTTTGAAGGGTGCTGATGGTATCCTAGTACCAGGAGGGTTTGGTGATAGAGGAGTGCAAGGGAAGATACTTGCTACAAAGTACGCCCGTGAAAATCAAGTCCCTTTCCTTGGCATATGCCTGGGAATGCAGCTGGCTGTTGTTGAATTTGCCCGCTCCATTCTTGGTTTTCACGATGCAAACAGCACAGAGTTTGAACCAGAAACTTCAAGCCCTTGCATCATATTTATGCCAGAAGGATCCACAACTCATATGGGGGGCACAATGCGCTTAGGGTCAAGGAAGACTTACTTCCAGGTTGCTGATTGCAAGTCTGCCAAGCTGTACGGTAATGCAAAGTTTGTAGATGAGCGACACAGGCACAGATATGAGGTAAATCCAGATATGATATCAGAAATTGAGAAGGCTGGCCTCTCCTTTGTTGGGAAAGATGAGACTGGGCGTCGTATGGAGATTGTTGAACTACCAAGTCATCCATACTTTGTGGGTGCTCAGTTCCATCCTGAATTCAAGTCCAGACCTGGGAAACCTTCTGCATTGTTTCTAGGTCTTATCGCAGCAGCGTCTGGGTGTCTAGAATCAGTATTGCAAACAGGTGGCAAGGTGAACATAGTTTCGAAAAATGGAGTAGCCAATGGATCTGCAATGGGGAAAGTTCATCAGAACGGCAATGTCTATAGCAATGGAAACGGGCTTCACCACTGA
Protein Sequence
- >AT3G12670.1
MKYVLVTGGVVSGLGKGVTASSIGLLLQACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDSTLTRDNNITTGKIYQSVIDKERKGDYLGRTVQVVPHVTDAIQEWIERVANVPVDGKEGPPDVCVIELGGTIGDIESMPFIEALGQFSYKVGPGNFCLVHVSLVPVLSVVGEQKTKPTQHSVRGLRSLGLTPNILACRSTKALEENVKTKLSQFCHVPEVNIVTLYDVPNIWHVPLLLRDQKAHEAILRELNLSNAIKPDLTEWTARTKIYDTLQDPVRIAMVGKYTGLTDSYLSVLKALLHASVACHKKLVIEWVAASDLEEITAQETPDVHKAAWDLLKGADGILVPGGFGDRGVQGKILATKYARENQVPFLGICLGMQLAVVEFARSILGFHDANSTEFEPETSSPCIIFMPEGSTTHMGGTMRLGSRKTYFQVADCKSAKLYGNAKFVDERHRHRYEVNPDMISEIEKAGLSFVGKDETGRRMEIVELPSHPYFVGAQFHPEFKSRPGKPSALFLGLIAAASGCLESVLQTGGKVNIVSKNGVANGSAMGKVHQNGNVYSNGNGLHH