Gene Details:
- Gene ID: AT3G12620
- Gene Symbol: PP2C.D3
- Gene Name: D-CLADE TYPE 2C PROTEIN PHOSPHATASE 3
- Description: Protein phosphatase 2C family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The complement of protein phosphatase catalytic subunits encoded in the genome of Arabidopsis. DOI: 10.1104/pp.004002 ; PMID: 12068129
- POLTERGEIST encodes a protein phosphatase 2C that regulates CLAVATA pathways controlling stem cell identity at Arabidopsis shoot and flower meristems. DOI: 10.1016/s0960-9822(03)00042-3 ; PMID: 12573213
- Plant PP2C phosphatases: emerging functions in stress signaling. DOI: 10.1016/j.tplants.2004.03.007 ; PMID: 15130549
- POL and related phosphatases are dosage-sensitive regulators of meristem and organ development in Arabidopsis. DOI: 10.1016/j.ydbio.2005.06.020 ; PMID: 16112663
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis. DOI: 10.1186/1471-2164-9-550 ; PMID: 19021904
- A double-mutant collection targeting MAP kinase related genes in Arabidopsis for studying genetic interactions. DOI: 10.1111/tpj.13292 ; PMID: 27490954
- Mutation of a Conserved Motif of PP2C.D Phosphatases Confers SAUR Immunity and Constitutive Activity. DOI: 10.1104/pp.19.00496 ; PMID: 31311832
Sequences:
cDNA Sequence
- >AT3G12620.1
GACAAAACTAGGAATTGGTGATCAGGTGATACTTTTGATATTTGCATATATTTGATTTCATTCAGATTATGGAAAATGTAAATAAAAATCTATTTATTATAGTAATATTTTAATAAAATTAGTAATCTTGAAAAATGGAGAAACGTAGCTAACTATGGGAGAAAAAGCTGCCTAAAACGTCGGGTTGTTTCTGAGGTCAATGCCTAAACAGCTAAACTCGAAAACCAAATGACAACAAAAAAGCATCAAAAAAAAAAGAAAAAAAAAAAGAGAGAAAAATAAGAGAAATCGAACCCCCAAATAAGGAATTCTGACAGAGTCGCCTGCTAGATTTGTTTTCTTTCTCTCTCGTCATCTCTCTTCCTCTCTGTAATCCCAACCGGAGTTACGATTCCTTCTTATCGTAACTCCTGCTTCCGATCTCGATCCAATTTTCACTTTTGTTTTGTCCGAACGGTAAATCATTTCGCGGCTTTTTTTTTTTAAGGGAAGGAGGAATAAGCAAATTTTGATTTGATTCCGTTTTTTTGGGGGTGTTAGTGATCTTTTAGATGAAGTAAAGAAATTTTGATTATTGAGGGGATTATGTGAGTTATGGTATCATCGGCAACTATATTGCGGATGGTAGCACCATGTTGGAGGCGACCTTCTGTTAAAGGAGATCATTCTACTAGAGACGCTAATGGTCGATGTGATGGTCTTCTTTGGTATAAAGATTCTGGTAACCATGTTGCTGGAGAGTTCTCTATGTCTGTTATTCAAGCTAATAATCTTCTCGAAGATCATAGCAAGCTTGAGTCTGGACCTGTTAGTATGTTTGATTCTGGTCCTCAAGCTACTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTGCCCGTTTCGTTAATAAACACCTCTTCGACAACATCAGGAAGTTTACATCAGAGAATCATGGAATGTCTGCCAATGTTATAACTAAAGCGTTTTTAGCTACGGAAGAAGATTTTCTTTCTCTTGTCCGGCGGCAGTGGCAGATTAAACCACAGATTGCTTCTGTTGGAGCTTGTTGTCTGGTAGGGATCATATGTAGTGGATTGTTGTATATTGCAAACGCTGGAGATTCTCGGGTTGTGCTAGGAAGACTGGAAAAAGCGTTTAAAATTGTCAAGGCCGTTCAGTTATCGTCTGAGCATAATGCAAGTCTTGAATCTGTGAGAGAGGAGTTGCGCTCGTTGCATCCAAATGATCCTCAGATTGTGGTCTTGAAGCACAAAGTTTGGCGTGTCAAAGGTATTATACAGGTTTCACGGTCGATTGGTGATGCATACTTAAAGAAAGCAGAATTCAACCGGGAACCATTGTTGGCAAAGTTCAGGGTCCCTGAGGTTTTCCATAAGCCCATCCTTAGAGCAGAGCCGGCAATTACAGTACACAAAATCCATCCAGAAGATCAGTTTCTTATATTTGCATCAGACGGCTTGTGGGAGCACTTGTCCAATCAAGAAGCTGTTGACATTGTGAACACATGCCCGCGCAATGGGATTGCAAGGAAGCTCATAAAAACAGCTCTAAGAGAGGCAGCAAAGAAGAGAGAGATGAGATATTCGGATCTAAAAAAGATCGATAGAGGAGTGCGGAGACATTTTCATGATGATATAACAGTCATAGTTGTGTTTCTTGATTCACATCTCGTCAGTCGCAGTACCTCACGCCGACCTCTCCTCTCCATCTCAGGTGGTGGTGATTTAGCTGGACCTTCTACTTGACTCTACTCTCACCACATCTATATATATCTTATATATACATTATCCACTATATATAAAAACACATTGCAAAACGCAATTCAAGTTCCTTCTTTTTTTTTTTCTCTATATATAAAAATTTCCTCTTAACTCTGTTTTTTATTCATCCCAAAAAAAAATGAAGAGTTGAAATCCAATGTATAGGTCTTTTGGCAAACTGAGTTTATTATGGATAATATAAAGAGATATCACTTGTTGGAAAGA - >AT3G12620.2
GACAAAACTAGGAATTGGTGATCAGGTGATACTTTTGATATTTGCATATATTTGATTTCATTCAGATTATGGAAAATGTAAATAAAAATCTATTTATTATAGTAATATTTTAATAAAATTAGTAATCTTGAAAAATGGAGAAACGTAGCTAACTATGGGAGAAAAAGCTGCCTAAAACGTCGGGTTGTTTCTGAGGTCAATGCCTAAACAGCTAAACTCGAAAACCAAATGACAACAAAAAAGCATCAAAAAAAAAAGAAAAAAAAAAAGAGAGAAAAATAAGAGAAATCGAACCCCCAAATAAGGAATTCTGACAGAGTCGCCTGCTAGATTTGTTTTCTTTCTCTCTCGTCATCTCTCTTCCTCTCTGTAATCCCAACCGGAGTTACGATTCCTTCTTATCGTAACTCCTGCTTCCGATCTCGATCCAATTTTCACTTTTGTTTTGTCCGAACGGTAAATCATTTCGCGGCTTTTTTTTTTTAAGGGAAGGAGGAATAAGCAAATTTTGATTTGATTCCGTTTTTTTGGGGGTGTTAGTGATCTTTTAGATGAAGTAAAGAAATTTTGATTATTGAGGGGATTATGTGAGTTATGGTATCATCGGCAACTATATTGCGGATGGTAGCACCATGTTGGAGGCGACCTTCTGTTAAAGGAGATCATTCTACTAGAGACGCTAATGGTCGATGTGATGGTCTTCTTTGGTATAAAGATTCTGGTAACCATGTTGCTGGAGAGTTCTCTATGTCTGTTATTCAAGCTAATAATCTTCTCGAAGATCATAGCAAGCTTGAGTCTGGACCTGTTAGTATGTTTGATTCTGGTCCTCAAGCTACTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTGCCCGTTTCGTTAATAAACACCTCTTCGACAACATCAGGAAGTTTACATCAGAGAATCATGGAATGTCTGCCAATGTTATAACTAAAGCGTTTTTAGCTACGGAAGAAGATTTTCTTTCTCTTGTCCGGCGGCAGTGGCAGATTAAACCACAGATTGCTTCTGTTGGAGCTTGTTGTCTGGTAGGGATCATATGTAGTGGATTGTTGTATATTGCAAACGCTGGAGATTCTCGGGTTGTGCTAGGAAGACTGGAAAAAGCGTTTAAAATTGTCAAGGCCGTTCAGTTATCGTCTGAGCATAATGCAAGTCTTGAATCTGTGAGAGAGGAGTTGCGCTCGTTGCATCCAAATGATCCTCAGATTGTGGTCTTGAAGCACAAAGTTTGGCGTGTCAAAGGTATTATACAGGTTTCACGGTCGATTGGTGATGCATACTTAAAGAAAGCAGAATTCAACCGGGAACCATTGTTGGCAAAGTTCAGGGTCCCTGAGGTTTTCCATAAGCCCATCCTTAGAGCAGAGCCGGCAATTACAGTACACAAAATCCATCCAGAAGATCAGTTTCTTATATTTGCATCAGACGGCTTGTGGGAGCACTTGTCCAATCAAGAAGCTGTTGACATTGTGAACACATGCCCGCGCAATGGGATTGCAAGGAAGCTCATAAAAACAGCTCTAAGAGAGGCAGCAAAGAAGAGAGAGATGAGATATTCGGATCTAAAAAAGATCGATAGAGGAGTGCGGAGACATTTTCATGATGATATAACAGTCATAGTTGTGTTTCTTGATTCACATCTCGTCAGTCGCAGTACCTCACGCCGACCTCTCCTCTCCATCTCAGGTGGTGGTGATTTAGCTGGACCTTCTACTTGACTCTACTCTCACCACATCTATATATATCTTATATATACATTATCCACTATATATAAAAACACATTGCAAAACGCAATTCAAGTTCCTTCTTTTTTTTTTTCTCTATATATAAAAATTTCCTCTTAACTCTGTTTTTTATTCATCCCAAAAAAAAATGAAGAGTTGAAATCCAATGTATAGGTCTTTTGGCAAACTGAGTTTATTATGGATAATATAAAGAGATATCACTTGTTGGAAAGA
CDS Sequence
- >AT3G12620.1
ATGGTATCATCGGCAACTATATTGCGGATGGTAGCACCATGTTGGAGGCGACCTTCTGTTAAAGGAGATCATTCTACTAGAGACGCTAATGGTCGATGTGATGGTCTTCTTTGGTATAAAGATTCTGGTAACCATGTTGCTGGAGAGTTCTCTATGTCTGTTATTCAAGCTAATAATCTTCTCGAAGATCATAGCAAGCTTGAGTCTGGACCTGTTAGTATGTTTGATTCTGGTCCTCAAGCTACTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTGCCCGTTTCGTTAATAAACACCTCTTCGACAACATCAGGAAGTTTACATCAGAGAATCATGGAATGTCTGCCAATGTTATAACTAAAGCGTTTTTAGCTACGGAAGAAGATTTTCTTTCTCTTGTCCGGCGGCAGTGGCAGATTAAACCACAGATTGCTTCTGTTGGAGCTTGTTGTCTGGTAGGGATCATATGTAGTGGATTGTTGTATATTGCAAACGCTGGAGATTCTCGGGTTGTGCTAGGAAGACTGGAAAAAGCGTTTAAAATTGTCAAGGCCGTTCAGTTATCGTCTGAGCATAATGCAAGTCTTGAATCTGTGAGAGAGGAGTTGCGCTCGTTGCATCCAAATGATCCTCAGATTGTGGTCTTGAAGCACAAAGTTTGGCGTGTCAAAGGTATTATACAGGTTTCACGGTCGATTGGTGATGCATACTTAAAGAAAGCAGAATTCAACCGGGAACCATTGTTGGCAAAGTTCAGGGTCCCTGAGGTTTTCCATAAGCCCATCCTTAGAGCAGAGCCGGCAATTACAGTACACAAAATCCATCCAGAAGATCAGTTTCTTATATTTGCATCAGACGGCTTGTGGGAGCACTTGTCCAATCAAGAAGCTGTTGACATTGTGAACACATGCCCGCGCAATGGGATTGCAAGGAAGCTCATAAAAACAGCTCTAAGAGAGGCAGCAAAGAAGAGAGAGATGAGATATTCGGATCTAAAAAAGATCGATAGAGGAGTGCGGAGACATTTTCATGATGATATAACAGTCATAGTTGTGTTTCTTGATTCACATCTCGTCAGTCGCAGTACCTCACGCCGACCTCTCCTCTCCATCTCAGGTGGTGGTGATTTAGCTGGACCTTCTACTTGA - >AT3G12620.2
ATGGTATCATCGGCAACTATATTGCGGATGGTAGCACCATGTTGGAGGCGACCTTCTGTTAAAGGAGATCATTCTACTAGAGACGCTAATGGTCGATGTGATGGTCTTCTTTGGTATAAAGATTCTGGTAACCATGTTGCTGGAGAGTTCTCTATGTCTGTTATTCAAGCTAATAATCTTCTCGAAGATCATAGCAAGCTTGAGTCTGGACCTGTTAGTATGTTTGATTCTGGTCCTCAAGCTACTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTGCCCGTTTCGTTAATAAACACCTCTTCGACAACATCAGGAAGTTTACATCAGAGAATCATGGAATGTCTGCCAATGTTATAACTAAAGCGTTTTTAGCTACGGAAGAAGATTTTCTTTCTCTTGTCCGGCGGCAGTGGCAGATTAAACCACAGATTGCTTCTGTTGGAGCTTGTTGTCTGGTAGGGATCATATGTAGTGGATTGTTGTATATTGCAAACGCTGGAGATTCTCGGGTTGTGCTAGGAAGACTGGAAAAAGCGTTTAAAATTGTCAAGGCCGTTCAGTTATCGTCTGAGCATAATGCAAGTCTTGAATCTGTGAGAGAGGAGTTGCGCTCGTTGCATCCAAATGATCCTCAGATTGTGGTCTTGAAGCACAAAGTTTGGCGTGTCAAAGGTATTATACAGGTTTCACGGTCGATTGGTGATGCATACTTAAAGAAAGCAGAATTCAACCGGGAACCATTGTTGGCAAAGTTCAGGGTCCCTGAGGTTTTCCATAAGCCCATCCTTAGAGCAGAGCCGGCAATTACAGTACACAAAATCCATCCAGAAGATCAGTTTCTTATATTTGCATCAGACGGCTTGTGGGAGCACTTGTCCAATCAAGAAGCTGTTGACATTGTGAACACATGCCCGCGCAATGGGATTGCAAGGAAGCTCATAAAAACAGCTCTAAGAGAGGCAGCAAAGAAGAGAGAGATGAGATATTCGGATCTAAAAAAGATCGATAGAGGAGTGCGGAGACATTTTCATGATGATATAACAGTCATAGTTGTGTTTCTTGATTCACATCTCGTCAGTCGCAGTACCTCACGCCGACCTCTCCTCTCCATCTCAGGTGGTGGTGATTTAGCTGGACCTTCTACTTGA
Protein Sequence
- >AT3G12620.1
MVSSATILRMVAPCWRRPSVKGDHSTRDANGRCDGLLWYKDSGNHVAGEFSMSVIQANNLLEDHSKLESGPVSMFDSGPQATFVGVYDGHGGPEAARFVNKHLFDNIRKFTSENHGMSANVITKAFLATEEDFLSLVRRQWQIKPQIASVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRSLHPNDPQIVVLKHKVWRVKGIIQVSRSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSRRPLLSISGGGDLAGPST - >AT3G12620.2
MVSSATILRMVAPCWRRPSVKGDHSTRDANGRCDGLLWYKDSGNHVAGEFSMSVIQANNLLEDHSKLESGPVSMFDSGPQATFVGVYDGHGGPEAARFVNKHLFDNIRKFTSENHGMSANVITKAFLATEEDFLSLVRRQWQIKPQIASVGACCLVGIICSGLLYIANAGDSRVVLGRLEKAFKIVKAVQLSSEHNASLESVREELRSLHPNDPQIVVLKHKVWRVKGIIQVSRSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRNGIARKLIKTALREAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSHLVSRSTSRRPLLSISGGGDLAGPST