Information report for AT3G12490
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- AtCYS1, a cystatin from Arabidopsis thaliana, suppresses hypersensitive cell death. DOI: 10.1046/j.1432-1033.2003.03630.x ; PMID: 12787025
- Transcriptional profiling implicates novel interactions between abiotic stress and hormonal responses in Thellungiella, a close relative of Arabidopsis. DOI: 10.1104/pp.105.070508 ; PMID: 16500996
- Two cysteine proteinase inhibitors from Arabidopsis thaliana, AtCYSa and AtCYSb, increasing the salt, drought, oxidation and cold tolerance. DOI: 10.1007/s11103-008-9357-x ; PMID: 18523728
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Divalent metal ions in plant mitochondria and their role in interactions with proteins and oxidative stress-induced damage to respiratory function. DOI: 10.1104/pp.109.147942 ; PMID: 20018591
- Arabidopsis cysteine proteinase inhibitor AtCYSb interacts with a Ca(2+)-dependent nuclease, AtCaN2. DOI: 10.1016/j.febslet.2013.09.019 ; PMID: 24076026
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
- Protease activity and phytocystatin expression in Arabidopsis thaliana upon Heterodera schachtii infection. DOI: 10.1016/j.plaphy.2016.10.021 ; PMID: 27816823
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- Two cysteine proteinase inhibitors from Arabidopsis thaliana, AtCYSa and AtCYSb, increasing the salt, drought, oxidation and cold tolerance. DOI: 10.1007/s11103-008-9357-x ; PMID: 18523728
Gene Resources
- UniProt: A0A2H1ZEH9
- EMBL: CP002686
- AlphaFoldDB: A0A2H1ZEH9
- EnsemblPlants: AT3G12490.1
- Gramene: AT3G12490.1
- Orthologous matrix: CDDEDMA
- ExpressionAtlas: AT3G12490
- InterPro: IPR000010, IPR018073, IPR027214
- PANTHER: PTHR11413, PTHR11413:SF110
- SUPFAM: SSF54403
- PROSITE: PS00287
- Gene3D: 3.10.450.10
- SWISS-MODEL: A0A2H1ZEH9
- Conserved Domain Database: cd00042
Homologs
- Rosa chinensis RchiOBHm_Chr4g0409301
Sequences
cDNA Sequence
- >AT3G12490.1
AAAAATACAGGGCACCGAACCAAATAAAGTGATTTAGGCTTCTGCAACGAAGAGATGGCTTTAGTCGGAGGTGTTGGCGATGTCCCTGCTAATCAGAACAGTGGTGAGGTTGAGAGCCTCGCTCGTTTCGCTGTCGATGAACACAACAAGAAAGAGAATGCACTTCTTGAGTTTGCGAGAGTTGTGAAGGCGAAAGAACAAGTTGTAGCCGGAACACTGCATCACCTGACTCTGGAGATTCTCGAGGCAGGACAGAAGAAGCTTTACGAAGCCAAAGTGTGGGTCAAGCCGTGGTTGAACTTTAAAGAGTTACAGGAGTTCAAGCCTGCCAGTGATGCCCCTGCTATCACTTCCTCCGATCTTGGCTGCAAGCAAGGTGAACATGAATCTGGATGGAGGGAAGTTCCCGGAGATGATCCAGAAGTGAAGCATGTTGCTGAGCAGGCTGTCAAGACCATTCAGCAGAGGTCTAACTCCTTGTTCCCTTATGAACTTCTGGAGGTTGTGCATGCTAAAGCTGAGTGTCAGTGA - >AT3G12490.2
AAAAATACAGGGCACCGAACCAAATAAAGTGATTTAGGCTTCTGCAACGAAGAGATGGCTTTAGTCGGAGGTGTTGGCGATGTCCCTGCTAATCAGAACAGTGGTGAGGTTGAGAGCCTCGCTCGTTTCGCTGTCGATGAACACAACAAGAAAGAGAATGCACTTCTTGAGTTTGCGAGAGTTGTGAAGGCGAAAGAACAAGTTGTAGCCGGAACACTGCATCACCTGACTCTGGAGATTCTCGAGGCAGGACAGAAGAAGCTTTACGAAGCCAAAGTGTGGGTCAAGCCGTGGTTGAACTTTAAAGAGTTACAGGAGTTCAAGCCTGCCAGTGATGCCCCTGCTATCACTTCCTCCGATCTTGGCTGCAAGCAAGGTGAACATGAATCTGGATGGAGGGAAGTTCCCGGAGATGATCCAGAAGTGAAGCATGTTGCTGAGCAGGCTGTCAAGACCATTCAGCAGAGGTCTAACTCCTTGTTCCCTTATGAACTTCTGGAGGTTGTGCATGCTAAAGCTGAGTGTCAGTGA
CDS Sequence
- >AT3G12490.1
ATGGCTTTAGTCGGAGGTGTTGGCGATGTCCCTGCTAATCAGAACAGTGGTGAGGTTGAGAGCCTCGCTCGTTTCGCTGTCGATGAACACAACAAGAAAGAGAATGCACTTCTTGAGTTTGCGAGAGTTGTGAAGGCGAAAGAACAAGTTGTAGCCGGAACACTGCATCACCTGACTCTGGAGATTCTCGAGGCAGGACAGAAGAAGCTTTACGAAGCCAAAGTGTGGGTCAAGCCGTGGTTGAACTTTAAAGAGTTACAGGAGTTCAAGCCTGCCAGTGATGCCCCTGCTATCACTTCCTCCGATCTTGGCTGCAAGCAAGGTGAACATGAATCTGGATGGAGGGAAGTTCCCGGAGATGATCCAGAAGTGAAGCATGTTGCTGAGCAGGCTGTCAAGACCATTCAGCAGAGGTCTAACTCCTTGTTCCCTTATGAACTTCTGGAGGTTGTGCATGCTAAAGCTGAGTGTCAGTGA - >AT3G12490.2
ATGGCTTTAGTCGGAGGTGTTGGCGATGTCCCTGCTAATCAGAACAGTGGTGAGGTTGAGAGCCTCGCTCGTTTCGCTGTCGATGAACACAACAAGAAAGAGAATGCACTTCTTGAGTTTGCGAGAGTTGTGAAGGCGAAAGAACAAGTTGTAGCCGGAACACTGCATCACCTGACTCTGGAGATTCTCGAGGCAGGACAGAAGAAGCTTTACGAAGCCAAAGTGTGGGTCAAGCCGTGGTTGAACTTTAAAGAGTTACAGGAGTTCAAGCCTGCCAGTGATGCCCCTGCTATCACTTCCTCCGATCTTGGCTGCAAGCAAGGTGAACATGAATCTGGATGGAGGGAAGTTCCCGGAGATGATCCAGAAGTGAAGCATGTTGCTGAGCAGGCTGTCAAGACCATTCAGCAGAGGTCTAACTCCTTGTTCCCTTATGAACTTCTGGAGGTTGTGCATGCTAAAGCTGAGTGTCAGTGA
Protein Sequence
- >AT3G12490.1
MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITSSDLGCKQGEHESGWREVPGDDPEVKHVAEQAVKTIQQRSNSLFPYELLEVVHAKAECQ - >AT3G12490.2
MALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKPASDAPAITSSDLGCKQGEHESGWREVPGDDPEVKHVAEQAVKTIQQRSNSLFPYELLEVVHAKAECQ