Information report for AT3G12480
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Transcriptional Regulation of Arabidopsis Polycomb Repressive Complex 2 Coordinates Cell-Type Proliferation and Differentiation. DOI: 10.1105/tpc.15.00744 ; PMID: 27650334
- The Arabidopsis thaliana Nuclear Factor Y Transcription Factors. DOI: 10.3389/fpls.2016.02045 ; PMID: 28119722
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: Q9LHG0
- EMBL: AF462841, AP002047, AY143847
- AlphaFoldDB: Q9LHG0
- EnsemblPlants: AT3G12480.1
- Gramene: AT3G12480.1
- KEGG: ath:AT3G12480
- Orthologous matrix: WPMMELG
- ExpressionAtlas: AT3G12480
- InterPro: IPR003958, IPR009072, IPR050568
- PANTHER: PTHR10252, PTHR10252:SF5
- SUPFAM: SSF47113
- Gene3D: 1.10.20.10
- OrthoDB: Q9LHG0
- SWISS-MODEL: Q9LHG0
- Conserved Domain Database: cd22906
Homologs
- Brassica napus GSBRNA2T00096944001, GSBRNA2T00096456001, GSBRNA2T00110653001, GSBRNA2T00111520001, GSBRNA2T00110656001
- Brassica oleracea XP_013611468.1, XP_013623357.1
- Brassica rapa XP_009120643.1, Bra038724, XP_009135231.1
Sequences
cDNA Sequence
- >AT3G12480.1
CGTCGACCCATTTTTTTTCTTTGACCCAAAACTTTAATTTGATTATATATATTTAATTTTAATTTTTCCATCGCACGGAGATTGTAACAAGGAAACCGCCGTCGCCGGATCTGATAGTGCATATCCATGAAGTAGAAGACGAAGAAACTTACTTTCTGATCTTAGAACGGAGTATATGTACAGAAGATTCGCGTCCCTCAATTTTTGATCTCAAGGGTCGGGTTTACCTTTTTTTCCTTCTTATTTTTGGTGGCTTTGCGTTTTCTCATTCGACGATTTCTGGATTTGGGGATTTCAAAACCATGAGGAAGAAGCTCGATACTCGGTTCCCAGCTGCTCGTATTAAAAAGATTATGCAAGCTGATGAGGATGTTGGCAAGATAGCTTTGGCAGTGCCTGTCTTAGTCTCAAAATCTTTGGAGTTGTTCTTGCAAGACCTTTGTGATCGTACATATGAAATTACCCTTGAAAGAGGTGCCAAGACTGTGAGCTCATTGCACCTAAAACATTGTGTGGAAAGATATAACGTGTTTGATTTTCTGAGGGAAGTTGTGAGTAAGGTGCCTGACTATGGCCATTCCCAAGGGCAAGGACATGGTGATGTTACCATGGATGATCGCAGCATCTCCAAGAGAAGGAAGCCCATCAGCGATGAAGTGAATGACAGTGACGAGGAATATAAGAAAAGCAAAACGCAAGAGATAGGGAGTGCTAAGACCAGTGGCAGGGGTGGTAGAGGAAGAGGGCGAGGAAGAGGTCGTGGTGGACGAGCTGCAAAAGCAGCCGAAAGAGAGGGTCTCAACCGCGAGATGGAAGTAGAAGCCGCCAATTCTGGACAGCCACCACCAGAAGACAATGTCAAGATGCATGCGTCAGAGTCATCACCACAAGAGGATGAGAAGAAAGGCATCGACGGCACAGCAGCATCGAACGAAGACACCAAGCAACACCTTCAAAGTCCCAAAGAAGGCATTGACTTTGATCTCAACGCTGAATCCCTCGACCTAAACGAGACCAAACTGGCACCAGCCACAGGCACAACCACAACCACAACTGCAGCAACAGACTCTGAGGAGTATTCGGGCTGGCCTATGATGGACATAAGCAAAATGGATCCAGCACAGCTTGCTAGTCTGGGTAAGAGGATAGACGAGGATGAGGAAGATTATGACGAAGAAGGCTAAGTCATAACAGCACTATAGGATATATAGAGTAGCAGCGTTTAGCAGTTTGTCTAGAAAATGCTTCTTCTGTCATCAAAATCTTCTCCTGTTTCCATTTATTGTATGAACCAAAGATTGCATGCACTCTATGAAACTTAATTTATTCTCCTGATTTGTTATTTAAGGTTTTAGAGTTTTACATCAGAAGTTAAAAT
CDS Sequence
- >AT3G12480.1
ATGAGGAAGAAGCTCGATACTCGGTTCCCAGCTGCTCGTATTAAAAAGATTATGCAAGCTGATGAGGATGTTGGCAAGATAGCTTTGGCAGTGCCTGTCTTAGTCTCAAAATCTTTGGAGTTGTTCTTGCAAGACCTTTGTGATCGTACATATGAAATTACCCTTGAAAGAGGTGCCAAGACTGTGAGCTCATTGCACCTAAAACATTGTGTGGAAAGATATAACGTGTTTGATTTTCTGAGGGAAGTTGTGAGTAAGGTGCCTGACTATGGCCATTCCCAAGGGCAAGGACATGGTGATGTTACCATGGATGATCGCAGCATCTCCAAGAGAAGGAAGCCCATCAGCGATGAAGTGAATGACAGTGACGAGGAATATAAGAAAAGCAAAACGCAAGAGATAGGGAGTGCTAAGACCAGTGGCAGGGGTGGTAGAGGAAGAGGGCGAGGAAGAGGTCGTGGTGGACGAGCTGCAAAAGCAGCCGAAAGAGAGGGTCTCAACCGCGAGATGGAAGTAGAAGCCGCCAATTCTGGACAGCCACCACCAGAAGACAATGTCAAGATGCATGCGTCAGAGTCATCACCACAAGAGGATGAGAAGAAAGGCATCGACGGCACAGCAGCATCGAACGAAGACACCAAGCAACACCTTCAAAGTCCCAAAGAAGGCATTGACTTTGATCTCAACGCTGAATCCCTCGACCTAAACGAGACCAAACTGGCACCAGCCACAGGCACAACCACAACCACAACTGCAGCAACAGACTCTGAGGAGTATTCGGGCTGGCCTATGATGGACATAAGCAAAATGGATCCAGCACAGCTTGCTAGTCTGGGTAAGAGGATAGACGAGGATGAGGAAGATTATGACGAAGAAGGCTAA
Protein Sequence
- >AT3G12480.1
MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVNDSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRGGRAAKAAEREGLNREMEVEAANSGQPPPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGIDFDLNAESLDLNETKLAPATGTTTTTTAATDSEEYSGWPMMDISKMDPAQLASLGKRIDEDEEDYDEEG