Gene Details:
- Gene ID: AT3G12360
- Gene Symbol: ITN1
- Gene Name: INCREASED TOLERANCE TO NACL
- Description: Ankyrin repeat family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000003 — whole plant — planta entera (Spanish, exact), 植物体全体 (Japanese, exact), clonal colony (related), colony (related), bush (narrow), frutex (narrow), frutices (narrow), gametophyte (narrow), herb (narrow), liana (narrow), prothalli (narrow), prothallium (narrow), prothallus (narrow), seedling (narrow), shrub (narrow), sporophyte (narrow), suffrutex (narrow), suffrutices (narrow), tree (narrow), vine (narrow), woody clump (narrow), genet (broad), ramet (broad)
- PO:0009015 — portion of vascular tissue — porción de tejido vascular (Spanish, exact), vascular tissue (exact), 維管束細胞の一部 (Japanese, exact), vascular system (related)
Germplasm Phenotype:
- itn-T — Increased salt tolerance.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , whole plant , portion of vascular tissue
Literature:
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Interaction between a plasma membrane-localized ankyrin-repeat protein ITN1 and a nuclear protein RTV1. DOI: 10.1016/j.bbrc.2012.05.136 ; PMID: 22664102
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequences:
cDNA Sequence
- >AT3G12360.2
CCAAAATTCAGATAGAGATGTGTGTTTGTTTATATTCTAGATCTGTGTGGTAGTTGAATCCTGAGGTTTTTGTTCTCTGCTGAAATTTTTCAGGAGAAAGAGATATGGAGAAAGGAGGAATGATATTACTACAGTCAAGTGAGAATCAAAATCCTATGATAGATCCTTCACCAACACCTTCACCATCTGCAACTGCTACTGCCCCAGCTTTGGTTTTGTCTAATTCAGGCAAGAGAATGGATCAAGCTGGCAAGAAAAAGTATGTTAAGCAAGTCACGGGTCGCCACAACGACACCGAGCTTCACTTAGCGGCCCAACGAGGTGATTTGGCTGCTGTGCAGCAGATTCTCAAGGATATTAACTCTCAGATGGAAGGGATTCTGAGTGGGGAAGAGTTTGATGCTGAAGTTGCGGAGATTCGAGCATCGATTGTGAATGAGGTGAATGAGTTAGGGGAGACGGCGCTCTTCACTGCTGCGGATAAAGGACATCTTGATGTTGTCAAAGAGCTGTTGAAGTATTCGAGTAGAGAGAGTATTGCTAAGAAGAATCGTTCTGGATATGATCCACTTCATATTGCTGCCATACAGGGTCATCATGCTATTGTTGAGGTCTTGCTAGATCATGATGCGACGCTTAGCCAGACATTTGGCCCATCGAATGCAACTCCGCTTGTGTCTGCAGCTATGAGAGGCCATACAGAAGTTGTGAACCAGCTCTTATCCAAAGCTGGGAATTTGCTAGAAATTTCTCGGTCTAACAATAAAAATGCCTTGCATCTAGCTGCAAGGCAAGGACATGTGGAGGTCATAAAAGCTCTTCTCTCCAAGGATCCTCAGCTAGCGAGACGGATTGACAAGAAAGGACAAACTGCACTTCACATGGCTGTTAAAGGCCAGAGTTCTGAAGTAGTGAAATTGCTTCTTGATGCAGATCCTGCTATTGTTATGCAACCGGACAAGTCTTGTAACACAGCGTTACATGTTGCCACCAGGAAAAAACGAGCAGAGATTGTAGAACTATTGTTGTCACTGCCTGATACCAACGCCAATACTTTAACCCGCGATCACAAGACAGCGCTTGACATAGCAGAAGGACTTCCCCTCTCAGAAGAATCTTCATACATAAAAGAGTGTCTTGCTCGTAGCGGGGCTCTTAGGGCGAATGAGCTGAACCAGCCAAGGGACGAGCTGAGAAGCACTGTCACCCAAATCAAGAACGATGTACACATCCAGCTGGAACAGACGAAAAGGACGAACAAAAACGTGCACAACATTTCAAAAGAACTCAGGAAACTCCACAGAGAAGGGATCAACAATGCAACCAATTCTGTAACTGTTGTGGCTGTATTGTTTGCAACTGTAGCTTTTGCTGCTATATTCACAGTGCCGGGAGGAGACAACAATGACGGGTCTGCAGTGGTGGTGGGCCGAGCATCATTCAAGATCTTCTTCATCTTCAACGCACTCGCGTTGTTTACGTCTCTGGCGGTTGTGGTTGTCCAGATCACATTGGTGAGAGGAGAGACAAAAGCTGAGAAGAGGGTAGTGGAAGTGATCAACAAACTCATGTGGTTGGCATCGATGTGTACATCTGTGGCATTTTTGGCATCTTCATACATAGTGGTTGGGCGTAAGAACGAGTGGGCGGCTGAGCTGGTGACCGTGGTTGGGGGTGTGATAATGGCTGGTGTTCTTGGAACCATGACTTATTACGTGGTAAAATCGAAGAGGACAAGGTCGATGAGGAAGAAGGTGAAGAGTGCTCGCAGGAGTGGTTCCAACTCGTGGCATCATTCAGATTTCTCTAACTCGGAAGTTGATCCTATTTTCGCAATCTAAGATGCGTAAAAGAATCGTGTATATATATTGTTGTATTTGGTGAAGAGAGCTAGACTATTTAGTGTATAAAGCCCCCTGACCATCAAAAGGCAAACACTATTGTCAACCATTAAAGGTTTACACTGCTCAACTCATCTGTAAAACAGTTAACAATTGTCTTCTTCGGAAAGCAAAGAAAAGCAAAGGTTCCTTTGTTAGGAAATCATTTGTAGTATTCATGTTCAATCACTTCAGTTGC - >AT3G12360.1
CCAAAATTCAGATAGAGATGTGTGTTTGTTTATATTCTAGATCTGTGTGGTAGTTGAATCCTGAGGTTTTTGTTCTCTGCTGAAATTTTTCAGGAGAAAGAGATATGGAGAAAGGAGGAATGATATTACTACAGTCAAGTGAGAATCAAAATCCTATGATAGATCCTTCACCAACACCTTCACCATCTGCAACTGCTACTGCCCCAGCTTTGGTTTTGTCTAATTCAGGCAAGAGAATGGATCAAGCTGGCAAGAAAAAGTATGTTAAGCAAGTCACGGGTCGCCACAACGACACCGAGCTTCACTTAGCGGCCCAACGAGGTGATTTGGCTGCTGTGCAGCAGATTCTCAAGGATATTAACTCTCAGATGGAAGGGATTCTGAGTGGGGAAGAGTTTGATGCTGAAGTTGCGGAGATTCGAGCATCGATTGTGAATGAGGTGAATGAGTTAGGGGAGACGGCGCTCTTCACTGCTGCGGATAAAGGACATCTTGATGTTGTCAAAGAGCTGTTGAAGTATTCGAGTAGAGAGAGTATTGCTAAGAAGAATCGTTCTGGATATGATCCACTTCATATTGCTGCCATACAGGGTCATCATGCTATTGTTGAGGTCTTGCTAGATCATGATGCGACGCTTAGCCAGACATTTGGCCCATCGAATGCAACTCCGCTTGTGTCTGCAGCTATGAGAGGCCATACAGAAGTTGTGAACCAGCTCTTATCCAAAGCTGGGAATTTGCTAGAAATTTCTCGGTCTAACAATAAAAATGCCTTGCATCTAGCTGCAAGGCAAGGACATGTGGAGGTCATAAAAGCTCTTCTCTCCAAGGATCCTCAGCTAGCGAGACGGATTGACAAGAAAGGACAAACTGCACTTCACATGGCTGTTAAAGGCCAGAGTTCTGAAGTAGTGAAATTGCTTCTTGATGCAGATCCTGCTATTGTTATGCAACCGGACAAGTCTTGTAACACAGCGTTACATGTTGCCACCAGGAAAAAACGAGCAGAGATTGTAGAACTATTGTTGTCACTGCCTGATACCAACGCCAATACTTTAACCCGCGATCACAAGACAGCGCTTGACATAGCAGAAGGACTTCCCCTCTCAGAAGAATCTTCATACATAAAAGAGTGTCTTGCTCGTAGCGGGGCTCTTAGGGCGAATGAGCTGAACCAGCCAAGGGACGAGCTGAGAAGCACTGTCACCCAAATCAAGAACGATGTACACATCCAGCTGGAACAGACGAAAAGGACGAACAAAAACGTGCACAACATTTCAAAAGAACTCAGGAAACTCCACAGAGAAGGGATCAACAATGCAACCAATTCTGTAACTGTTGTGGCTGTATTGTTTGCAACTGTAGCTTTTGCTGCTATATTCACAGTGCCGGGAGGAGACAACAATGACGGGTCTGCAGTGGTGGTGGGCCGAGCATCATTCAAGATCTTCTTCATCTTCAACGCACTCGCGTTGTTTACGTCTCTGGCGGTTGTGGTTGTCCAGATCACATTGGTGAGAGGAGAGACAAAAGCTGAGAAGAGGGTAGTGGAAGTGATCAACAAACTCATGTGGTTGGCATCGATGTGTACATCTGTGGCATTTTTGGCATCTTCATACATAGTGGTTGGGCGTAAGAACGAGTGGGCGGCTGAGCTGGTGACCGTGGTTGGGGGTGTGATAATGGCTGGTGTTCTTGGAACCATGACTTATTACGTGGTAAAATCGAAGAGGACAAGGTCGATGAGGAAGAAGGTGAAGAGTGCTCGCAGGAGTGGTTCCAACTCGTGGCATCATTCAGATTTCTCTAACTCGGAAGTTGATCCTATTTTCGCAATCTAAGATGCGTAAAAGAATCGTGTATATATATTGTTGTATTTGGTGAAGAGAGCTAGACTATTTAGTGTATAAAGCCCCCTGACCATCAAAAGGCAAACACTATTGTCAACCATTAAAGGTTTACACTGCTCAACTCATCTGTAAAACAGTTAACAATTGTCTTCTTCGGAAAGCAAAGAAAAGCAAAGGTTCCTTTGTTAGGAAATCATTTGTAGTATTCATGTTCAATCACTTCAGTTGC
CDS Sequence
- >AT3G12360.2
ATGGAGAAAGGAGGAATGATATTACTACAGTCAAGTGAGAATCAAAATCCTATGATAGATCCTTCACCAACACCTTCACCATCTGCAACTGCTACTGCCCCAGCTTTGGTTTTGTCTAATTCAGGCAAGAGAATGGATCAAGCTGGCAAGAAAAAGTATGTTAAGCAAGTCACGGGTCGCCACAACGACACCGAGCTTCACTTAGCGGCCCAACGAGGTGATTTGGCTGCTGTGCAGCAGATTCTCAAGGATATTAACTCTCAGATGGAAGGGATTCTGAGTGGGGAAGAGTTTGATGCTGAAGTTGCGGAGATTCGAGCATCGATTGTGAATGAGGTGAATGAGTTAGGGGAGACGGCGCTCTTCACTGCTGCGGATAAAGGACATCTTGATGTTGTCAAAGAGCTGTTGAAGTATTCGAGTAGAGAGAGTATTGCTAAGAAGAATCGTTCTGGATATGATCCACTTCATATTGCTGCCATACAGGGTCATCATGCTATTGTTGAGGTCTTGCTAGATCATGATGCGACGCTTAGCCAGACATTTGGCCCATCGAATGCAACTCCGCTTGTGTCTGCAGCTATGAGAGGCCATACAGAAGTTGTGAACCAGCTCTTATCCAAAGCTGGGAATTTGCTAGAAATTTCTCGGTCTAACAATAAAAATGCCTTGCATCTAGCTGCAAGGCAAGGACATGTGGAGGTCATAAAAGCTCTTCTCTCCAAGGATCCTCAGCTAGCGAGACGGATTGACAAGAAAGGACAAACTGCACTTCACATGGCTGTTAAAGGCCAGAGTTCTGAAGTAGTGAAATTGCTTCTTGATGCAGATCCTGCTATTGTTATGCAACCGGACAAGTCTTGTAACACAGCGTTACATGTTGCCACCAGGAAAAAACGAGCAGAGATTGTAGAACTATTGTTGTCACTGCCTGATACCAACGCCAATACTTTAACCCGCGATCACAAGACAGCGCTTGACATAGCAGAAGGACTTCCCCTCTCAGAAGAATCTTCATACATAAAAGAGTGTCTTGCTCGTAGCGGGGCTCTTAGGGCGAATGAGCTGAACCAGCCAAGGGACGAGCTGAGAAGCACTGTCACCCAAATCAAGAACGATGTACACATCCAGCTGGAACAGACGAAAAGGACGAACAAAAACGTGCACAACATTTCAAAAGAACTCAGGAAACTCCACAGAGAAGGGATCAACAATGCAACCAATTCTGTAACTGTTGTGGCTGTATTGTTTGCAACTGTAGCTTTTGCTGCTATATTCACAGTGCCGGGAGGAGACAACAATGACGGGTCTGCAGTGGTGGTGGGCCGAGCATCATTCAAGATCTTCTTCATCTTCAACGCACTCGCGTTGTTTACGTCTCTGGCGGTTGTGGTTGTCCAGATCACATTGGTGAGAGGAGAGACAAAAGCTGAGAAGAGGGTAGTGGAAGTGATCAACAAACTCATGTGGTTGGCATCGATGTGTACATCTGTGGCATTTTTGGCATCTTCATACATAGTGGTTGGGCGTAAGAACGAGTGGGCGGCTGAGCTGGTGACCGTGGTTGGGGGTGTGATAATGGCTGGTGTTCTTGGAACCATGACTTATTACGTGGTAAAATCGAAGAGGACAAGGTCGATGAGGAAGAAGGTGAAGAGTGCTCGCAGGAGTGGTTCCAACTCGTGGCATCATTCAGATTTCTCTAACTCGGAAGTTGATCCTATTTTCGCAATCTAA - >AT3G12360.1
ATGGAGAAAGGAGGAATGATATTACTACAGTCAAGTGAGAATCAAAATCCTATGATAGATCCTTCACCAACACCTTCACCATCTGCAACTGCTACTGCCCCAGCTTTGGTTTTGTCTAATTCAGGCAAGAGAATGGATCAAGCTGGCAAGAAAAAGTATGTTAAGCAAGTCACGGGTCGCCACAACGACACCGAGCTTCACTTAGCGGCCCAACGAGGTGATTTGGCTGCTGTGCAGCAGATTCTCAAGGATATTAACTCTCAGATGGAAGGGATTCTGAGTGGGGAAGAGTTTGATGCTGAAGTTGCGGAGATTCGAGCATCGATTGTGAATGAGGTGAATGAGTTAGGGGAGACGGCGCTCTTCACTGCTGCGGATAAAGGACATCTTGATGTTGTCAAAGAGCTGTTGAAGTATTCGAGTAGAGAGAGTATTGCTAAGAAGAATCGTTCTGGATATGATCCACTTCATATTGCTGCCATACAGGGTCATCATGCTATTGTTGAGGTCTTGCTAGATCATGATGCGACGCTTAGCCAGACATTTGGCCCATCGAATGCAACTCCGCTTGTGTCTGCAGCTATGAGAGGCCATACAGAAGTTGTGAACCAGCTCTTATCCAAAGCTGGGAATTTGCTAGAAATTTCTCGGTCTAACAATAAAAATGCCTTGCATCTAGCTGCAAGGCAAGGACATGTGGAGGTCATAAAAGCTCTTCTCTCCAAGGATCCTCAGCTAGCGAGACGGATTGACAAGAAAGGACAAACTGCACTTCACATGGCTGTTAAAGGCCAGAGTTCTGAAGTAGTGAAATTGCTTCTTGATGCAGATCCTGCTATTGTTATGCAACCGGACAAGTCTTGTAACACAGCGTTACATGTTGCCACCAGGAAAAAACGAGCAGAGATTGTAGAACTATTGTTGTCACTGCCTGATACCAACGCCAATACTTTAACCCGCGATCACAAGACAGCGCTTGACATAGCAGAAGGACTTCCCCTCTCAGAAGAATCTTCATACATAAAAGAGTGTCTTGCTCGTAGCGGGGCTCTTAGGGCGAATGAGCTGAACCAGCCAAGGGACGAGCTGAGAAGCACTGTCACCCAAATCAAGAACGATGTACACATCCAGCTGGAACAGACGAAAAGGACGAACAAAAACGTGCACAACATTTCAAAAGAACTCAGGAAACTCCACAGAGAAGGGATCAACAATGCAACCAATTCTGTAACTGTTGTGGCTGTATTGTTTGCAACTGTAGCTTTTGCTGCTATATTCACAGTGCCGGGAGGAGACAACAATGACGGGTCTGCAGTGGTGGTGGGCCGAGCATCATTCAAGATCTTCTTCATCTTCAACGCACTCGCGTTGTTTACGTCTCTGGCGGTTGTGGTTGTCCAGATCACATTGGTGAGAGGAGAGACAAAAGCTGAGAAGAGGGTAGTGGAAGTGATCAACAAACTCATGTGGTTGGCATCGATGTGTACATCTGTGGCATTTTTGGCATCTTCATACATAGTGGTTGGGCGTAAGAACGAGTGGGCGGCTGAGCTGGTGACCGTGGTTGGGGGTGTGATAATGGCTGGTGTTCTTGGAACCATGACTTATTACGTGGTAAAATCGAAGAGGACAAGGTCGATGAGGAAGAAGGTGAAGAGTGCTCGCAGGAGTGGTTCCAACTCGTGGCATCATTCAGATTTCTCTAACTCGGAAGTTGATCCTATTTTCGCAATCTAA
Protein Sequence
- >AT3G12360.2
MEKGGMILLQSSENQNPMIDPSPTPSPSATATAPALVLSNSGKRMDQAGKKKYVKQVTGRHNDTELHLAAQRGDLAAVQQILKDINSQMEGILSGEEFDAEVAEIRASIVNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDADPAIVMQPDKSCNTALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEGLPLSEESSYIKECLARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASMCTSVAFLASSYIVVGRKNEWAAELVTVVGGVIMAGVLGTMTYYVVKSKRTRSMRKKVKSARRSGSNSWHHSDFSNSEVDPIFAI - >AT3G12360.1
MEKGGMILLQSSENQNPMIDPSPTPSPSATATAPALVLSNSGKRMDQAGKKKYVKQVTGRHNDTELHLAAQRGDLAAVQQILKDINSQMEGILSGEEFDAEVAEIRASIVNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDADPAIVMQPDKSCNTALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEGLPLSEESSYIKECLARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNNDGSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINKLMWLASMCTSVAFLASSYIVVGRKNEWAAELVTVVGGVIMAGVLGTMTYYVVKSKRTRSMRKKVKSARRSGSNSWHHSDFSNSEVDPIFAI