Information report for AT3G12320
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- SALK_085551C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:decreased,osmotic stress:no change,salt stress:decreased,ABA:no change,hypoxia:ND.
Functional Keywords
Literature and News
- phyA dominates in transduction of red-light signals to rapidly responding genes at the initiation of Arabidopsis seedling de-etiolation. DOI: 10.1111/j.1365-313X.2006.02914.x ; PMID: 17076805
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Coordinated transcriptional regulation underlying the circadian clock in Arabidopsis. DOI: 10.1038/ncb2219 ; PMID: 21499259
- LNK genes integrate light and clock signaling networks at the core of the Arabidopsis oscillator. DOI: 10.1073/pnas.1302170110 ; PMID: 23818596
- LNK1 and LNK2 are transcriptional coactivators in the Arabidopsis circadian oscillator. DOI: 10.1105/tpc.114.126573 ; PMID: 25012192
- A Raf-like protein kinase BHP mediates blue light-dependent stomatal opening. DOI: 10.1038/srep45586 ; PMID: 28358053
Gene Resources
- UniProt: A0A178VJK8
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VJK8
- EnsemblPlants: AT3G12320.1, AT3G12320.3
- Gramene: AT3G12320.1, AT3G12320.3
- KEGG: ath:AT3G12320
- Orthologous matrix: YRSDGMW
- ExpressionAtlas: AT3G12320
- InterPro: IPR039928
- PANTHER: PTHR33334, PTHR33334:SF10
- OrthoDB: A0A178VJK8
Sequences
cDNA Sequence
- >AT3G12320.3
TGTTTCTGAAAGTAGTGAGCTTGATTTGTTCATTCATCAGGTTGATAGATCGATCGATTGATTTTATGGATTGTTATGCTGAAGAGCTTGTTGTGCCTAATTATCAAGAATCATCATCAGAGACATACCCATCTACTGGTATGTGGGGTGGATGGAGCATGAGCTCCCCTGAAGCAGCTGAGAAATGTTTCGATTACGATGGTTTCAATGGAGAAGGAATGATGTATAGTCAGATGAGTATGAGGACTAGTGAAGAAGAAGAAGAGTCTAAAAGATCAAAGGCTTTCTATGGTGCTTCTTCACTTCACGATTTCGAAGGCATCGAACAGATGGATGATATGTTCTTAAGTTCAATTTTGGAGGATGTTCCAGAGGATGATGGAGATGTTCACCGCGCGACCAGTAGCAATAACAGTGTCGGTTCTTCTTCTATGTATGGTGGTGGTAGGGAAGTCCCTATGTTCCATTGTCATGACATGTCTTTCAAGGAGGAAGCTCCATTTACAATCTCGGATCTGTCTGAAGAGAACATGTTAGATTCAAACTATGGGGATGAACTGTCTTCTGAAGAATTCGTGTTGCAGGATCTACAAAGGGCTTCACAAAAGTTGACTGATGAGACACGCAAATGTTTCCGGGATACTTTTTACCGACTTGCAAGGAGCTCACAAGATAAATCTGATTCAGTCAGCCCCAACTCGGAAGAGCTGCTTATGCAAACGTCTAGATATGATTATGGTGATGGAAACAGGTTTAGTAGAGAGGAAGAGATAGAATCTGAAACGAATTCAATCGATAGAGCTGTCGCAAACCTCACATTCAACAAAATGGAATCCAACATAAGCAATTTTCCTCTGTCGGAAAGAGTACAGTAGCTGCCGCTGATCAAGATCAACCATTGGCGCCTCATCATCTTCCTATGAAGTTTTCTGTTACCATATGTGTATAAATGTGTGTATATATAGTTGACTTAATGTTGCAAGCTTCAGTTTTGATCTGTCAAAAGAATCTGGTCCCCTTTTTAATTCCTGCAGTATGCTTTCTACAAACACTACCTGATGGCCTTGAGACTTACTTTCCTC - >AT3G12320.1
TGTTTCTGAAAGTAGTGAGCTTGATTTGTTCATTCATCAGGTTGATAGATCGATCGATTGATTTTATGGATTGTTATGCTGAAGAGCTTGTTGTGCCTAATTATCAAGAATCATCATCAGAGACATACCCATCTACTGGTATGTGGGGTGGATGGAGCATGAGCTCCCCTGAAGCAGCTGAGAAATGTTTCGATTACGATGGTTTCAATGGAGAAGGAATGATGTATAGTCAGATGAGTATGAGGACTAGTGAAGAAGAAGAAGAGTCTAAAAGATCAAAGGCTTTCTATGGTGCTTCTTCACTTCACGATTTCGAAGGCATCGAACAGATGGATGATATGTTCTTAAGTTCAATTTTGGAGGATGTTCCAGAGGATGATGGAGATGTTCACCGCGCGACCAGTAGCAATAACAGTGTCGGTTCTTCTTCTATGTATGGTGGTGGTAGGGAAGTCCCTATGTTCCATTGTCATGACATGTCTTTCAAGGAGGAAGCTCCATTTACAATCTCGGATCTGTCTGAAGAGAACATGTTAGATTCAAACTATGGGGATGAACTGTCTTCTGAAGAATTCGTGTTGCAGGATCTACAAAGGGCTTCACAAAAGTTGACTGATGAGACACGCAAATGTTTCCGGGATACTTTTTACCGACTTGCAAGGAGCTCACAAGATAAATCTGATTCAGTCAGCCCCAACTCGGAAGAGCTGCTTATGCAAACGTCTAGATATGATTATGGTGATGGAAACAGGTTTAGTAGAGAGGAAGAGATAGAATCTGAAACGAATTCAATCGATAGAGCTGTCGCAAACCTCACATTCAACAAAATGGAATCCAACATAAGCAATTTTCCTCTGTCGGAAAGAGTACAGTAGCTGCCGCTGATCAAGATCAACCATTGGCGCCTCATCATCTTCCTATGAAGTTTTCTGTTACCATATGTGTATAAATGTGTGTATATATAGTTGACTTAATGTTGCAAGCTTCAGTTTTGATCTGTCAAAAGAATCTGGTCCCCTTTTTAATTCCTGCAGTATGCTTTCTACAAACACTACCTGATGGCCTTGAGACTTACTTTCCTC - >AT3G12320.2
TGTTTCTGAAAGTAGTGAGCTTGATTTGTTCATTCATCAGGTTGATAGATCGATCGATTGATTTTATGGATTGTTATGCTGAAGAGCTTGTTGTGCCTAATTATCAAGAATCATCATCAGAGACATACCCATCTACTGGTATGTGGGGTGGATGGAGCATGAGCTCCCCTGAAGCAGCTGAGAAATGTTTCGATTACGATGGTTTCAATGGAGAAGGAATGATGTATAGTCAGATGAGTATGAGGACTAGTGAAGAAGAAGAAGAGTCTAAAAGATCAAAGGCTTTCTATGGTGCTTCTTCACTTCACGATTTCGAAGGCATCGAACAGATGGATGATATGTTCTTAAGTTCAATTTTGGAGGATGTTCCAGAGGATGATGGAGATGTTCACCGCGCGACCAGTAGCAATAACAGTGTCGGTTCTTCTTCTATGTATGGTGGTGGTAGGGAAGTCCCTATGTTCCATTGTCATGACATGTCTTTCAAGGAGGAAGCTCCATTTACAATCTCGGATCTGTCTGAAGAGAACATGTTAGATTCAAACTATGGGGATGAACTGTCTTCTGAAGAATTCGTGTTGCAGGATCTACAAAGGGCTTCACAAAAGTTGACTGATGAGACACGCAAATGTTTCCGGGATACTTTTTACCGACTTGCAAGGAGCTCACAAGATAAATCTGATTCAGTCAGCCCCAACTCGGAAGAGCTGCTTATGCAAACGTCTAGATATGATTATGGTGATGGAAACAGGTTTAGTAGAGAGGAAGAGATAGAATCTGAAACGAATTCAATCGATAGAGCTGTCGCAAACCTCACATTCAACAAAATGGAATCCAACATAAGCAATTTTCCTCTGTCGGAAAGAGTACAGTAGCTGCCGCTGATCAAGATCAACCATTGGCGCCTCATCATCTTCCTATGAAGTTTTCTGTTACCATATGTGTATAAATGTGTGTATATATAGTTGACTTAATGTTGCAAGCTTCAGTTTTGATCTGTCAAAAGAATCTGGTCCCCTTTTTAATTCCTGCAGTATGCTTTCTACAAACACTACCTGATGGCCTTGAGACTTACTTTCCTC
CDS Sequence
- >AT3G12320.3
ATGGATTGTTATGCTGAAGAGCTTGTTGTGCCTAATTATCAAGAATCATCATCAGAGACATACCCATCTACTGGTATGTGGGGTGGATGGAGCATGAGCTCCCCTGAAGCAGCTGAGAAATGTTTCGATTACGATGGTTTCAATGGAGAAGGAATGATGTATAGTCAGATGAGTATGAGGACTAGTGAAGAAGAAGAAGAGTCTAAAAGATCAAAGGCTTTCTATGGTGCTTCTTCACTTCACGATTTCGAAGGCATCGAACAGATGGATGATATGTTCTTAAGTTCAATTTTGGAGGATGTTCCAGAGGATGATGGAGATGTTCACCGCGCGACCAGTAGCAATAACAGTGTCGGTTCTTCTTCTATGTATGGTGGTGGTAGGGAAGTCCCTATGTTCCATTGTCATGACATGTCTTTCAAGGAGGAAGCTCCATTTACAATCTCGGATCTGTCTGAAGAGAACATGTTAGATTCAAACTATGGGGATGAACTGTCTTCTGAAGAATTCGTGTTGCAGGATCTACAAAGGGCTTCACAAAAGTTGACTGATGAGACACGCAAATGTTTCCGGGATACTTTTTACCGACTTGCAAGGAGCTCACAAGATAAATCTGATTCAGTCAGCCCCAACTCGGAAGAGCTGCTTATGCAAACGTCTAGATATGATTATGGTGATGGAAACAGGTTTAGTAGAGAGGAAGAGATAGAATCTGAAACGAATTCAATCGATAGAGCTGTCGCAAACCTCACATTCAACAAAATGGAATCCAACATAAGCAATTTTCCTCTGTCGGAAAGAGTACAGTAG - >AT3G12320.1
ATGGATTGTTATGCTGAAGAGCTTGTTGTGCCTAATTATCAAGAATCATCATCAGAGACATACCCATCTACTGGTATGTGGGGTGGATGGAGCATGAGCTCCCCTGAAGCAGCTGAGAAATGTTTCGATTACGATGGTTTCAATGGAGAAGGAATGATGTATAGTCAGATGAGTATGAGGACTAGTGAAGAAGAAGAAGAGTCTAAAAGATCAAAGGCTTTCTATGGTGCTTCTTCACTTCACGATTTCGAAGGCATCGAACAGATGGATGATATGTTCTTAAGTTCAATTTTGGAGGATGTTCCAGAGGATGATGGAGATGTTCACCGCGCGACCAGTAGCAATAACAGTGTCGGTTCTTCTTCTATGTATGGTGGTGGTAGGGAAGTCCCTATGTTCCATTGTCATGACATGTCTTTCAAGGAGGAAGCTCCATTTACAATCTCGGATCTGTCTGAAGAGAACATGTTAGATTCAAACTATGGGGATGAACTGTCTTCTGAAGAATTCGTGTTGCAGGATCTACAAAGGGCTTCACAAAAGTTGACTGATGAGACACGCAAATGTTTCCGGGATACTTTTTACCGACTTGCAAGGAGCTCACAAGATAAATCTGATTCAGTCAGCCCCAACTCGGAAGAGCTGCTTATGCAAACGTCTAGATATGATTATGGTGATGGAAACAGGTTTAGTAGAGAGGAAGAGATAGAATCTGAAACGAATTCAATCGATAGAGCTGTCGCAAACCTCACATTCAACAAAATGGAATCCAACATAAGCAATTTTCCTCTGTCGGAAAGAGTACAGTAG - >AT3G12320.2
ATGGATTGTTATGCTGAAGAGCTTGTTGTGCCTAATTATCAAGAATCATCATCAGAGACATACCCATCTACTGGTATGTGGGGTGGATGGAGCATGAGCTCCCCTGAAGCAGCTGAGAAATGTTTCGATTACGATGGTTTCAATGGAGAAGGAATGATGTATAGTCAGATGAGTATGAGGACTAGTGAAGAAGAAGAAGAGTCTAAAAGATCAAAGGCTTTCTATGGTGCTTCTTCACTTCACGATTTCGAAGGCATCGAACAGATGGATGATATGTTCTTAAGTTCAATTTTGGAGGATGTTCCAGAGGATGATGGAGATGTTCACCGCGCGACCAGTAGCAATAACAGTGTCGGTTCTTCTTCTATGTATGGTGGTGGTAGGGAAGTCCCTATGTTCCATTGTCATGACATGTCTTTCAAGGAGGAAGCTCCATTTACAATCTCGGATCTGTCTGAAGAGAACATGTTAGATTCAAACTATGGGGATGAACTGTCTTCTGAAGAATTCGTGTTGCAGGATCTACAAAGGGCTTCACAAAAGTTGACTGATGAGACACGCAAATGTTTCCGGGATACTTTTTACCGACTTGCAAGGAGCTCACAAGATAAATCTGATTCAGTCAGCCCCAACTCGGAAGAGCTGCTTATGCAAACGTCTAGATATGATTATGGTGATGGAAACAGGTTTAGTAGAGAGGAAGAGATAGAATCTGAAACGAATTCAATCGATAGAGCTGTCGCAAACCTCACATTCAACAAAATGGAATCCAACATAAGCAATTTTCCTCTGTCGGAAAGAGTACAGTAG
Protein Sequence
- >AT3G12320.3
MDCYAEELVVPNYQESSSETYPSTGMWGGWSMSSPEAAEKCFDYDGFNGEGMMYSQMSMRTSEEEEESKRSKAFYGASSLHDFEGIEQMDDMFLSSILEDVPEDDGDVHRATSSNNSVGSSSMYGGGREVPMFHCHDMSFKEEAPFTISDLSEENMLDSNYGDELSSEEFVLQDLQRASQKLTDETRKCFRDTFYRLARSSQDKSDSVSPNSEELLMQTSRYDYGDGNRFSREEEIESETNSIDRAVANLTFNKMESNISNFPLSERVQ - >AT3G12320.1
MDCYAEELVVPNYQESSSETYPSTGMWGGWSMSSPEAAEKCFDYDGFNGEGMMYSQMSMRTSEEEEESKRSKAFYGASSLHDFEGIEQMDDMFLSSILEDVPEDDGDVHRATSSNNSVGSSSMYGGGREVPMFHCHDMSFKEEAPFTISDLSEENMLDSNYGDELSSEEFVLQDLQRASQKLTDETRKCFRDTFYRLARSSQDKSDSVSPNSEELLMQTSRYDYGDGNRFSREEEIESETNSIDRAVANLTFNKMESNISNFPLSERVQ - >AT3G12320.2
MDCYAEELVVPNYQESSSETYPSTGMWGGWSMSSPEAAEKCFDYDGFNGEGMMYSQMSMRTSEEEEESKRSKAFYGASSLHDFEGIEQMDDMFLSSILEDVPEDDGDVHRATSSNNSVGSSSMYGGGREVPMFHCHDMSFKEEAPFTISDLSEENMLDSNYGDELSSEEFVLQDLQRASQKLTDETRKCFRDTFYRLARSSQDKSDSVSPNSEELLMQTSRYDYGDGNRFSREEEIESETNSIDRAVANLTFNKMESNISNFPLSERVQ