Information report for AT3G12270
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0018216 — involved in — peptidyl-arginine methylation
- GO:0016274 — enables — protein-arginine N-methyltransferase activity
- GO:0043412 — acts upstream of or within — macromolecule modification
- GO:0005737 — located in — cytoplasm
Functional Keywords
Literature and News
- Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. DOI: 10.1093/pcp/pch128 ; PMID: 15356332
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed. DOI: 10.1111/j.1365-313X.2005.02337.x ; PMID: 15703057
- Regulation of flowering time by the protein arginine methyltransferase AtPRMT10. DOI: 10.1038/sj.embor.7401111 ; PMID: 18007657
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
Gene Resources
- UniProt: A0A654FBM1
- EMBL: CACRSJ010000106, CACSHJ010000089
- AlphaFoldDB: A0A654FBM1
- EnsemblPlants: AT3G12270.1
- Gramene: AT3G12270.1
- KEGG: ath:AT3G12270
- Orthologous matrix: YSHFAIH
- ExpressionAtlas: AT3G12270
- InterPro: IPR013087, IPR025799, IPR029063
- PANTHER: PTHR11006, PTHR11006:SF89
- SUPFAM: SSF53335, SSF57667
- PROSITE: PS00028, PS51678
- Gene3D: 2.70.160.11, 3.40.50.150
- OrthoDB: A0A654FBM1
- SWISS-MODEL: A0A654FBM1
- Conserved Domain Database: cd02440
Homologs
- Brachypodium distachyon BRADI_1g51130v3
- Capsicum annuum T459_21619
- Lactuca sativa gene-LSAT_5X97961
- Manihot esculenta MANES_14G129300
- Rosa chinensis RchiOBHm_Chr2g0089261
- Solanum tuberosum PGSC0003DMG400023146
- Zea mays GRMZM2G080542
Sequences
cDNA Sequence
- >AT3G12270.1
GCTTTTTATGGGCCTAAGCTGATGTAGAGAATAGCCGTAATTATTTCCGGTTAGTTTCGGTTTACAAAAAAGGGTAAGAAGGTAATTGTTTTTCTATCCCGCCGGGGTGTCTCCGCTTTCTTAAACCTCTCTCTTAAGAACTTGGCGCCGTTATCTTTCTCATGGCGGCGACAATGGTGAAGCACGAGATTCTCAACTACAGCGAGGATGAAGAAGAAAATTACTCAGACGAAGGAGATTGGGGAGACTGGAAAGCTGATGATAATGGTATAGAAGGAGGAGAGGAGGAGGAGGAGGATGATGGTGACGACTCGGAATCTGATTTTCTGTGTTTGTTTTGTGATTCTCACTTCGTTTCCTGTGATTTACTCTTCGAACACTGTCGTCTAAGCCACGGATTCGACTTTCATGGAGTTAGAAAGGAATTGAAGCTCGATTTCTACTCTTCTTTTAAGCTCATCAACTATATTCGCTCACAGGTGGCTGAGAACATGTGTTTCAGTTGGAAGATTGAAGCTGATGATTACAAAGATGTTAAGTTTCCTTGGGATGAAGAGAAGTATCTGAAGCCTTTTTGGCAGGAGGATTCACTTTTGTACTCGTTTGCAGATGATGAGGAAGATGAAGAAGTCACGTTTGACAGAGAGGAAGTGATGGAGGAATTGCAGAAGCTTGGGGATTTAAGCATTGATGTCGAGGCTTTAGGGGAAAGCTCAATGTCGAACAGTGATAAATGCAATATAAATGGAAGTAAGGATGTAACTTCGCTCTCAAACTGCAATGGCCTAAAGCAAAGTTCTGCGGATGATTTGATAGTCAATGGGAAAGATGCAGAACCAAAGGTTTGTGATGGAAGGCTAGTTAATAGGAACATCAGAAAGGTGAATGAGAACTATTTTGGATCTTATAGTTCGTTTGGCATTCACAGGGAGATGCTAAGTGATAAGGTTAGAACAGAAGCATACCGAGATGCACTTTTGAAGAATCCTACTCTCTTGAATGGCTCTGTTGTAATGGATGTTGGTTGTGGAACTGGGATATTGAGTCTTTTTGCTGCTAAAGCTGGGGCTTCAAGGGTAGTTGCAGTTGAAGCTAGTGAGAAGATGGCCAAAGTTGCAACTAAGATTGCGAAGGATAACAAAGTATTCAATGATAACGAGCATAATGGGGTACTTGAAGTTGCACACTCAATGGTAGAAGAGCTAGATAAATCGATACAGATTCAGCCTCATAGTGTTGATGTGTTAGTCAGCGAATGGATGGGATACTGCCTTTTATATGAGTCAATGCTCAGTTCTGTGCTCTATGCAAGAGATCGGTGGTTGAAACCTGGAGGTGCAATCCTCCCTGACACGGCCACTATGTTTGTTGCGGGATTTGGAAAAGGTGCAACAAGTCTTCCTTTCTGGGAAGATGTCTATGGCTTTGACATGTCTTCAATTGGGAAGGAGATACATGACGACACTACTCGACTTCCCATTGTTGACGTTATAGCGGAGCGTGATTTAGTGACACAGCCTACCCTTCTTCAGACATTTGACCTGGCTACCATGAAACCGGATGAAGTAGATTTCACAGCAACGGCAACGCTGGAGCCCACTGAGTCAGAAGCAAAAACTAGGTTGTGCCATGGTGTTGTGTTGTGGTTTGACACAGGTTTCACCAGTAGGTTCTGTAAGGAAAACCCAACCGTACTATCCACATCACCCTACACTCCCCCAACACACTGGGCTCAGACAATCTTAACTTTTCAAGAACCAATCTCAGTGGCACCGGCCTCGGTTCTGTCTGGTAATGACAGAAGAGAAGCCATCGGAACCGAAGAGTGTCCCGCCTCAAGCATTCATCTGCGTGTGAGTGTTGCACGAGCACATGAGCATCGCAGCATAGACATCTCGTTAGAGGCTACTGGGCTGAGCTCAAAGGGTCAGAAGCGTCACTGGCCGGTTCAGATATTTAATCTATGAATGTGATTGTAGCCATTGTAACACTCTTTTCTGGCAAATTTGCTGAGGATTTTTTCATAAGTTGCAAGGTTGTTTTAAATTTAACCTATTGAGAAAGTTTTGAGAAATATGCTGGAGTAGTAAGTTATTCTGAAATCGACATAAAGTGTTGTTTTGCGGCGTAAATTTATAGAGAGCTAAAAAGGTAAGACAGACAATTGTTCAGACAATTTGTTGGTTATAGTTAATTGCTTAACTGTACTGTATATGTTCCA
CDS Sequence
- >AT3G12270.1
ATGGCGGCGACAATGGTGAAGCACGAGATTCTCAACTACAGCGAGGATGAAGAAGAAAATTACTCAGACGAAGGAGATTGGGGAGACTGGAAAGCTGATGATAATGGTATAGAAGGAGGAGAGGAGGAGGAGGAGGATGATGGTGACGACTCGGAATCTGATTTTCTGTGTTTGTTTTGTGATTCTCACTTCGTTTCCTGTGATTTACTCTTCGAACACTGTCGTCTAAGCCACGGATTCGACTTTCATGGAGTTAGAAAGGAATTGAAGCTCGATTTCTACTCTTCTTTTAAGCTCATCAACTATATTCGCTCACAGGTGGCTGAGAACATGTGTTTCAGTTGGAAGATTGAAGCTGATGATTACAAAGATGTTAAGTTTCCTTGGGATGAAGAGAAGTATCTGAAGCCTTTTTGGCAGGAGGATTCACTTTTGTACTCGTTTGCAGATGATGAGGAAGATGAAGAAGTCACGTTTGACAGAGAGGAAGTGATGGAGGAATTGCAGAAGCTTGGGGATTTAAGCATTGATGTCGAGGCTTTAGGGGAAAGCTCAATGTCGAACAGTGATAAATGCAATATAAATGGAAGTAAGGATGTAACTTCGCTCTCAAACTGCAATGGCCTAAAGCAAAGTTCTGCGGATGATTTGATAGTCAATGGGAAAGATGCAGAACCAAAGGTTTGTGATGGAAGGCTAGTTAATAGGAACATCAGAAAGGTGAATGAGAACTATTTTGGATCTTATAGTTCGTTTGGCATTCACAGGGAGATGCTAAGTGATAAGGTTAGAACAGAAGCATACCGAGATGCACTTTTGAAGAATCCTACTCTCTTGAATGGCTCTGTTGTAATGGATGTTGGTTGTGGAACTGGGATATTGAGTCTTTTTGCTGCTAAAGCTGGGGCTTCAAGGGTAGTTGCAGTTGAAGCTAGTGAGAAGATGGCCAAAGTTGCAACTAAGATTGCGAAGGATAACAAAGTATTCAATGATAACGAGCATAATGGGGTACTTGAAGTTGCACACTCAATGGTAGAAGAGCTAGATAAATCGATACAGATTCAGCCTCATAGTGTTGATGTGTTAGTCAGCGAATGGATGGGATACTGCCTTTTATATGAGTCAATGCTCAGTTCTGTGCTCTATGCAAGAGATCGGTGGTTGAAACCTGGAGGTGCAATCCTCCCTGACACGGCCACTATGTTTGTTGCGGGATTTGGAAAAGGTGCAACAAGTCTTCCTTTCTGGGAAGATGTCTATGGCTTTGACATGTCTTCAATTGGGAAGGAGATACATGACGACACTACTCGACTTCCCATTGTTGACGTTATAGCGGAGCGTGATTTAGTGACACAGCCTACCCTTCTTCAGACATTTGACCTGGCTACCATGAAACCGGATGAAGTAGATTTCACAGCAACGGCAACGCTGGAGCCCACTGAGTCAGAAGCAAAAACTAGGTTGTGCCATGGTGTTGTGTTGTGGTTTGACACAGGTTTCACCAGTAGGTTCTGTAAGGAAAACCCAACCGTACTATCCACATCACCCTACACTCCCCCAACACACTGGGCTCAGACAATCTTAACTTTTCAAGAACCAATCTCAGTGGCACCGGCCTCGGTTCTGTCTGGTAATGACAGAAGAGAAGCCATCGGAACCGAAGAGTGTCCCGCCTCAAGCATTCATCTGCGTGTGAGTGTTGCACGAGCACATGAGCATCGCAGCATAGACATCTCGTTAGAGGCTACTGGGCTGAGCTCAAAGGGTCAGAAGCGTCACTGGCCGGTTCAGATATTTAATCTATGA
Protein Sequence
- >AT3G12270.1
MAATMVKHEILNYSEDEEENYSDEGDWGDWKADDNGIEGGEEEEEDDGDDSESDFLCLFCDSHFVSCDLLFEHCRLSHGFDFHGVRKELKLDFYSSFKLINYIRSQVAENMCFSWKIEADDYKDVKFPWDEEKYLKPFWQEDSLLYSFADDEEDEEVTFDREEVMEELQKLGDLSIDVEALGESSMSNSDKCNINGSKDVTSLSNCNGLKQSSADDLIVNGKDAEPKVCDGRLVNRNIRKVNENYFGSYSSFGIHREMLSDKVRTEAYRDALLKNPTLLNGSVVMDVGCGTGILSLFAAKAGASRVVAVEASEKMAKVATKIAKDNKVFNDNEHNGVLEVAHSMVEELDKSIQIQPHSVDVLVSEWMGYCLLYESMLSSVLYARDRWLKPGGAILPDTATMFVAGFGKGATSLPFWEDVYGFDMSSIGKEIHDDTTRLPIVDVIAERDLVTQPTLLQTFDLATMKPDEVDFTATATLEPTESEAKTRLCHGVVLWFDTGFTSRFCKENPTVLSTSPYTPPTHWAQTILTFQEPISVAPASVLSGNDRREAIGTEECPASSIHLRVSVARAHEHRSIDISLEATGLSSKGQKRHWPVQIFNL