Gene Details:
- Gene ID: AT3G12260
- Gene Symbol: B14, NDUFA6
- Gene Name:
- Description: LYR family of Fe/S cluster biogenesis protein;(source:Araport11)
- TAIR Accession: locus:2082209
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005829 — located in — cytosol
- GO:0005747 — part of — mitochondrial respiratory chain complex I
- GO:0005739 — located in — mitochondrion
- GO:0006979 — involved in — response to oxidative stress
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Mitochondrial complex I from Arabidopsis and rice: orthologs of mammalian and fungal components coupled with plant-specific subunits. DOI: 10.1016/s0005-2728(03)00045-8 ; PMID: 12837548
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed. DOI: 10.1111/j.1365-313X.2005.02337.x ; PMID: 15703057
- Coordination of nuclear and mitochondrial genome expression during mitochondrial biogenesis in Arabidopsis. DOI: 10.1105/tpc.104.030254 ; PMID: 15829605
- Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. DOI: 10.1186/1471-2164-9-57 ; PMID: 18230180
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Proteomic approach to characterize mitochondrial complex I from plants. DOI: 10.1016/j.phytochem.2010.11.012 ; PMID: 21167537
- A Mitochondrial LYR Protein Is Required for Complex I Assembly. DOI: 10.1104/pp.19.00822 ; PMID: 31601645
- The translocase of the inner mitochondrial membrane 22-2 is required for mitochondrial membrane function during Arabidopsis seed development. DOI: 10.1093/jxb/erad141 ; PMID: 37105529
- Analysis of the Arabidopsis mitochondrial proteome. DOI: 6919 ; PMID: 11743115
- Mitochondrial complex I from Arabidopsis and rice: orthologs of mammalian and fungal components coupled with plant-specific subunits. DOI: 10.1016/s0005-2728(03)00045-8 ; PMID: 12837548
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. DOI: 10.1021/pr700595p ; PMID: 18189341
Sequences:
cDNA Sequence
- >AT3G12260.1
AGCCACTCACTTCGAAACGACGTCGTCAGATAACTCTGGAAGCAATCAGATAGTCAGATGTTTGTTTCTCTATTCGGCTACTCATTTCTCTTTTAATCTCAGGCAGGAAGGTGAAATTTTTCGATTTCGTAGATCAAAATGGCGGCACCATTCGCGTTGAGGAAAATCGGTGTTCCTCCGAACTCGGCGAACCTGACGGAAGCTCGCCGCCGTGTTTTCGATTTCTTTAGAGCTGCCTGTAGATCTATCCCCACCATCATGGACATTTACAATCTTCAAGATGTCGTCGCTCCTTCTCAGCTCCGCTATGCTATCTCTGCTCAGATTCGGAATAACGCTCACATCACCGATCCTAAGGTAATTGATCTTCTTATATTCAAAGGAATGGAAGAGCTGACTGACATTGTGGATCACGCAAAGCAGCGTCACCACATCATCGGTCAATATGTGGTGGGTGAAGGGCTCGTGCAGAATACTGGAAACAAGGATCAAGGAAAGACTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGAACTGGTGATGTTTACTTTTCGAGTTTCACATAAGCTGTACTGTTTATGCTGCTTCAGTTCTTGCTCAAGTTTGCATATGTCTTGCCAGTATTGTATTCTCGACATTTGGAAGAAGTCTTCTTCCTGGAAATAATTAGATCTTTTCATTTGTATGAGTATTTTCTCTGACTCAGGTTGGTTATACATAGTATTAGCCAAACCTCTGTAAGCTTTATGTGTGACAGTGTTTACTGGGCAATCTTGCTATGATTTCAAGATACACAATCTGCTCTCTTTTTTGAACTCTCAATATAAATTGATTTGGTCTGCTGG
CDS Sequence
- >AT3G12260.1
ATGGCGGCACCATTCGCGTTGAGGAAAATCGGTGTTCCTCCGAACTCGGCGAACCTGACGGAAGCTCGCCGCCGTGTTTTCGATTTCTTTAGAGCTGCCTGTAGATCTATCCCCACCATCATGGACATTTACAATCTTCAAGATGTCGTCGCTCCTTCTCAGCTCCGCTATGCTATCTCTGCTCAGATTCGGAATAACGCTCACATCACCGATCCTAAGGTAATTGATCTTCTTATATTCAAAGGAATGGAAGAGCTGACTGACATTGTGGATCACGCAAAGCAGCGTCACCACATCATCGGTCAATATGTGGTGGGTGAAGGGCTCGTGCAGAATACTGGAAACAAGGATCAAGGAAAGACTGATTTTCTCAAGAATTTCTACACCAGCAACTACTTTTGA
Protein Sequence
- >AT3G12260.1
MAAPFALRKIGVPPNSANLTEARRRVFDFFRAACRSIPTIMDIYNLQDVVAPSQLRYAISAQIRNNAHITDPKVIDLLIFKGMEELTDIVDHAKQRHHIIGQYVVGEGLVQNTGNKDQGKTDFLKNFYTSNYF