Gene Details:
- Gene ID: AT3G12180
- Gene Symbol: Cnih1
- Gene Name:
- Description: Cornichon family protein;(source:Araport11)
- TAIR Accession: locus:2082199
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0009892 — acts upstream of or within — negative regulation of metabolic process
- GO:0016192 — involved in — vesicle-mediated transport
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0005575 — is active in — cellular_component
- GO:0005515 — enables — protein binding
- GO:0048367 — acts upstream of or within — shoot system development
- GO:0006996 — acts upstream of or within — organelle organization
- GO:0019538 — acts upstream of or within — protein metabolic process
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed. DOI: 10.1111/j.1365-313X.2005.02337.x ; PMID: 15703057
- γ-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. DOI: 10.1111/pce.12033 ; PMID: 23148892
- Data-mining bioinformatics: suggesting Arabidopsis thaliana L-type lectin receptor kinase IX.2 (LecRK-IX.2) modulate metabolites and abiotic stress responses. DOI: 10.1080/15592324.2020.1818031 ; PMID: 32924779
- Interactome of Arabidopsis Thaliana. DOI: 10.3390/plants11030350 ; PMID: 35161331
Sequences:
cDNA Sequence
- >AT3G12180.1
CTAATGTCCAATAGAACCCCAAAGTAAAGTACACCAATTGTTGAGAGAAGAAGAGTTCTTTTTTTTTCAAAGGTATTTAAGGAGAAGAGTCGCAGTCGCAAAAAGACGAATCGTAATTGTTGAAGAGAGCAAATATGGCTTGGGATTTGTTTTTATGGATAGTCTCCTTCTTCGTTAGCTTGGCTCTCGTCGCTTCCGTCTTCTACCAGGTTATCTGCTTAACGGATTTAGAAGCTGATTACTTGAACCCTTTTGAAACAAGTACCCGTATCAACCGATTAGTAATACCTGAGTTTATCCTCCAAGGGTCACTCTGCCTTCTCTTCCTCCTCACATGGCATTGGGTCTTCTTTCTGGTCGCCGTCCCTGTAACAGTCTATCACGCAATGTTATACAAAGAGCGACGTTATCTCATCGATGTCACTGAAGTGTTCCGTGGTATCAGCTTTGAAAAGAAGCTCCGGTATACCAAGCTCGGGTTCTACGTCTTTCTCTTCATCATGGTTGTCTTTAGGCTCACTCTCTCTGCGGTCTATAGCTTCACGGAAGATGATGATCTACTTCATTTGTTTTGATTTATGCGCTTGCGCTCTGCGTTATCAACCACTCTCTCTTTATTTTCTGAGTGTGTTTTAGAAAATTGTGACAGGTTTTTATTACGTCCCTGCTTAGAATTAGCCATTCAGGGATTCATCATGTAGCTTTATATAACGTATGATTACCGAAAACTCATCACAAATCGTTTGACATGGAGGGTTTCATCAGTTTTGTTTTGCGCAATATAATGTTCAGTCTCATCATTGAAGTCATAAAAATCATGTATCAAGAATGAAGCTACATTGTATTACATAGACTGGCTGTGGAAAAAC
CDS Sequence
- >AT3G12180.1
ATGGCTTGGGATTTGTTTTTATGGATAGTCTCCTTCTTCGTTAGCTTGGCTCTCGTCGCTTCCGTCTTCTACCAGGTTATCTGCTTAACGGATTTAGAAGCTGATTACTTGAACCCTTTTGAAACAAGTACCCGTATCAACCGATTAGTAATACCTGAGTTTATCCTCCAAGGGTCACTCTGCCTTCTCTTCCTCCTCACATGGCATTGGGTCTTCTTTCTGGTCGCCGTCCCTGTAACAGTCTATCACGCAATGTTATACAAAGAGCGACGTTATCTCATCGATGTCACTGAAGTGTTCCGTGGTATCAGCTTTGAAAAGAAGCTCCGGTATACCAAGCTCGGGTTCTACGTCTTTCTCTTCATCATGGTTGTCTTTAGGCTCACTCTCTCTGCGGTCTATAGCTTCACGGAAGATGATGATCTACTTCATTTGTTTTGA
Protein Sequence
- >AT3G12180.1
MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIMVVFRLTLSAVYSFTEDDDLLHLF