Information report for AT3G12110
Gene Details
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Functional Descriptions
- PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005737 — located in — cytoplasm
- GO:0009570 — located in — chloroplast stroma
- GO:0005856 — located in — cytoskeleton
- GO:0009941 — located in — chloroplast envelope
- GO:0005200 — enables — structural constituent of cytoskeleton
- GO:0005739 — located in — mitochondrion
- GO:0030036 — acts upstream of or within — actin cytoskeleton organization
- GO:0009506 — located in — plasmodesma
- GO:0005829 — located in — cytosol
Functional Keywords
- trichome , shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature and News
- Female reproductive tissues are the primary target of Agrobacterium-mediated transformation by the Arabidopsis floral-dip method. DOI: 10.1104/pp.123.3.895 ; PMID: 10889238
- Distribution of actin gene isoforms in the Arabidopsis leaf measured in microsamples from intact individual cells. DOI: 10.1007/s00425-001-0732-y ; PMID: 12029478
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Overexpression of AtCPS and AtKS in Arabidopsis confers increased ent-kaurene production but no increase in bioactive gibberellins. DOI: 10.1104/pp.103.021725 ; PMID: 12805613
- Comparative analysis of the Arabidopsis pollen transcriptome. DOI: 10.1104/pp.103.020925 ; PMID: 12805594
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Genetic interaction of an origin recognition complex subunit and the Polycomb group gene MEDEA during seed development. DOI: 10.1105/tpc.019059 ; PMID: 15020747
- Differential expression of vacuolar H+-ATPase subunit c genes in tissues active in membrane trafficking and their roles in plant growth as revealed by RNAi. DOI: 10.1104/pp.103.034025 ; PMID: 15051861
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- A classical arabinogalactan protein is essential for the initiation of female gametogenesis in Arabidopsis. DOI: 10.1105/tpc.104.024588 ; PMID: 15377758
- Expression patterns of a novel AtCHX gene family highlight potential roles in osmotic adjustment and K+ homeostasis in pollen development. DOI: 10.1104/pp.104.046003 ; PMID: 15347787
- Genome-wide profiling of stored mRNA in Arabidopsis thaliana seed germination: epigenetic and genetic regulation of transcription in seed. DOI: 10.1111/j.1365-313X.2005.02337.x ; PMID: 15703057
- Polycomb group proteins function in the female gametophyte to determine seed development in plants. DOI: 10.1242/dev.009027 ; PMID: 17855429
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
- AtCXXS: atypical members of the Arabidopsis thaliana thioredoxin h family with a remarkably high disulfide isomerase activity. DOI: 10.1111/j.1399-3054.2008.01093.x ; PMID: 18384502
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of novel proteins involved in plant cell-wall synthesis based on protein-protein interaction data. DOI: 10.1021/pr100249c ; PMID: 20687615
- The Armadillo repeat gene ZAK IXIK promotes Arabidopsis early embryo and endosperm development through a distinctive gametophytic maternal effect. DOI: 10.1105/tpc.112.102384 ; PMID: 23064319
- Distinct Biochemical Properties of Arabidopsis thaliana Actin Isoforms. DOI: 10.1093/pcp/pcv176 ; PMID: 26578694
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
Gene Resources
- UniProt: Q541W9
- EMBL: AK118354
- AlphaFoldDB: Q541W9
- EnsemblPlants: AT3G12110.1
- Gramene: AT3G12110.1
- KEGG: ath:AT3G12110
- Orthologous matrix: IICFISK
- ExpressionAtlas: AT3G12110
Homologs
- Brassica napus BnaC05G0154800ZS
- Gossypium hirsutum GhACT_LI1, GhACT1
- Nicotiana benthamiana Niben101Scf00646g07008.1
- Oryza sativa OsACT1;OsActin-1, OsAct2;OsActin-2, OsACTIN2
- Petunia inflata Peinf101Scf00255g01007.1, Peinf101Scf00415g10022.1
- Solanum melongena Sme2.5_04709.1_g00010.1
- Triticum aestivum TaACTIN7-D;TaACT7-D, DRG1
Sequences
cDNA Sequence
- >AT3G12110.1
CTCCATCAATATTTATTACGGGCCTATTCCTTCCTTTTTTAAACTTCAATTCTCCGGCTCACATTCTCTTCTTCATTCGCTCCGTTTCTCTCTCAAAAACTACACACCCGTACCACACCACCACCCTCCTCGTTTCCTCAGAGATCCCCTCTCTAACTTCTAAGGATATAGAAAATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAGGCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCTCGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCTCAGTCTAAGAGAGGTATTTTGACATTGAAATATCCTATTGAGCATGGTATTGTTAGCAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCACCTGAAGAACACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGAAAATGACTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCAAGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCTGGAGATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGCGTTTGGACCTTGCAGGCCGTGACCTTACTGATTACCTCATGAAGATCTTAACCGAGCGTGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGAAACTTGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGCAAACACAAGCTCATCCGTTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCCGCTGCCCGGAGGTTCTGTTCCAACCGTCTTTGGTGGGAATGGAAGCTGCTGGTATTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAGATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGCTTCTAAGATTAAGCTCAAATCAAAGTGATGAATGATTGTTCTGTATTGGTAAAGCCTTTTGTTCATCGACTTTGTTGCAAAATATTCTTTTGTTTTCTATGTTTCTTCACCACTACATTACATTTCTTTCTTGTTGTTATCCTCTTTTGGTGTTTCTGCTATTAATCGAAAAAGAAATTTTCTTTTCTTAGTTTCTTTTTTCTCCTCTTCTTAATTCTGTGAAGATAAAAAAGAAGGATGAAACCAGTGGCCAGTGGGCATTGGATTTGGCTTTTTATTTTAGGCAAAAGACAGGAGTTCTTTACAAAAAGCTAATTCTAAAAAAGAGGAATCTAAAGCCGAACCACATGATTGGAGTTATAGAAAGAATAGTGACCTGCCAACAAAAACAGTACGATTAACTCGGCATTTTTAATTCATCGACATGGTCAACATGGTCAACATTGTCACGCTTCACTTCATTATCACAGTATGGAATACAGCGCC
CDS Sequence
- >AT3G12110.1
ATGGCAGATGGTGAAGACATTCAGCCTCTCGTCTGTGACAATGGAACCGGAATGGTTAAGGCTGGATTTGCTGGAGATGATGCACCAAGAGCTGTATTCCCTAGCATCGTTGGTCGTCCTCGACACACTGGTGTCATGGTTGGTATGGGACAAAAAGATGCTTACGTTGGTGATGAGGCTCAGTCTAAGAGAGGTATTTTGACATTGAAATATCCTATTGAGCATGGTATTGTTAGCAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCACCTGAAGAACACCCTGTTCTTCTCACTGAGGCTCCTCTCAACCCCAAGGCCAATCGTGAGAAAATGACTCAGATTATGTTTGAAACTTTCAACACTCCTGCCATGTATGTCGCTATCCAAGCTGTTCTTTCCCTCTACGCTAGTGGTCGTACTACTGGTATTGTGTTGGACTCTGGAGATGGTGTGAGTCACACTGTTCCAATTTATGAAGGATATGCTCTTCCACATGCTATTCTGCGTTTGGACCTTGCAGGCCGTGACCTTACTGATTACCTCATGAAGATCTTAACCGAGCGTGGTTACTCATTCACTACCTCAGCAGAGCGTGAAATCGTAAGGGATGTGAAAGAGAAACTTGCTTACATAGCACTTGACTACGAGCAAGAGATGGAAACAGCAAACACAAGCTCATCCGTTGAGAAGAGCTATGAGTTGCCTGATGGACAGGTGATCACCATTGGAGGAGAGAGATTCCGCTGCCCGGAGGTTCTGTTCCAACCGTCTTTGGTGGGAATGGAAGCTGCTGGTATTCACGAGACCACTTACAATTCCATCATGAAGTGTGATGTGGATATCAGGAAGGATCTGTATGGAAACATTGTGCTCAGTGGTGGAACCACCATGTTCCCTGGAATTGCTGATAGGATGAGCAAAGAGATCACTGCTTTGGCTCCAAGCAGCATGAAGATTAAGGTGGTTGCTCCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGCTCCATTCTAGCATCACTCAGTACCTTCCAACAGATGTGGATAGCAAAGGCCGAGTATGATGAGTCAGGGCCATCAATAGTCCACAGGAAGTGCTTCTAA
Protein Sequence
- >AT3G12110.1
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF