Gene Details:
- Gene ID: AT3G12070
- Gene Symbol: AtRGTB2, RGTB2
- Gene Name: RAB geranylgeranyl transferase beta subunit 2, RAB geranylgeranyl transferase beta subunit 2
- Description: RAB geranylgeranyl transferase beta subunit 2;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
- shoot axis apex , root , plant embryo , stamen , sepal , flower , inflorescence flower pedicel , hypocotyl , collective leaf structure
Literature:
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Arabidopsis RAB geranylgeranyl transferase beta-subunit mutant is constitutively photomorphogenic, and has shoot growth and gravitropic defects. DOI: 10.1111/j.1365-313X.2010.04172.x ; PMID: 20180921
Sequences:
cDNA Sequence
- >AT3G12070.4
GATTTAAGTGTTAATAAAAATTATACCAGCTAGGGATTTTTAACCCATTGAAGGAAAAACTAAAGTTGAATCAAGCTAACTTTAAAAATCGTTGGTGTTGTTTCTTCTGTTCGTGCCAAGTTTATTGAATCCCGATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAGAGTTCACTGGATCGAGAAAGCAAAGCTTGTCAAGTTTATCTTGGACTCTCAGGACATGGATAACGGAGGCATCTCAGATAGACCCAGCTATACTGTTGATATCTTCCACACCTACTTTGGAGTTGCGGGGCTCTCTCTTCTCGAGTATCCTGGAGTCAAAACAATTGATCCTGCCTACGCTTTGCCTGTCCATGTCATCAACCGGATTCTCTTCACCAAATGATTCTTCATCAGAACTCAGATTTAGGTTAGGCGTTGGAGTTAGACAAATTCTGGTTAGGTCTTCGATTCTAATAGTCTGGTTCTGTTCGGGTTAAGCATATGTTTACTATTACTTGTAGTCACAAAACCATTTACAATCTCTAACCTCTCCCATGAATTAGGTTTACAACCAAGAAAACTAACATGGCACTACTCTGATTCTCATCTACA - >AT3G12070.3
GATTTAAGTGTTAATAAAAATTATACCAGCTAGGGATTTTTAACCCATTGAAGGAAAAACTAAAGTTGAATCAAGCTAACTTTAAAAATCGTTGGTGTTGTTTCTTCTGTTCGTGCCAAGTTTATTGAATCCCGATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAGAGTTCACTGGATCGAGAAAGCAAAGCTTGTCAAGTTTATCTTGGACTCTCAGGACATGGATAACGGAGGCATCTCAGATAGACCCAGCTATACTGTTGATATCTTCCACACCTACTTTGGAGTTGCGGGGCTCTCTCTTCTCGAGTATCCTGGAGTCAAAACAATTGATCCTGCCTACGCTTTGCCTGTCCATGTCATCAACCGGATTCTCTTCACCAAATGATTCTTCATCAGAACTCAGATTTAGGTTAGGCGTTGGAGTTAGACAAATTCTGGTTAGGTCTTCGATTCTAATAGTCTGGTTCTGTTCGGGTTAAGCATATGTTTACTATTACTTGTAGTCACAAAACCATTTACAATCTCTAACCTCTCCCATGAATTAGGTTTACAACCAAGAAAACTAACATGGCACTACTCTGATTCTCATCTACA - >AT3G12070.1
GATTTAAGTGTTAATAAAAATTATACCAGCTAGGGATTTTTAACCCATTGAAGGAAAAACTAAAGTTGAATCAAGCTAACTTTAAAAATCGTTGGTGTTGTTTCTTCTGTTCGTGCCAAGTTTATTGAATCCCGATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAGAGTTCACTGGATCGAGAAAGCAAAGCTTGTCAAGTTTATCTTGGACTCTCAGGACATGGATAACGGAGGCATCTCAGATAGACCCAGCTATACTGTTGATATCTTCCACACCTACTTTGGAGTTGCGGGGCTCTCTCTTCTCGAGTATCCTGGAGTCAAAACAATTGATCCTGCCTACGCTTTGCCTGTCCATGTCATCAACCGGATTCTCTTCACCAAATGATTCTTCATCAGAACTCAGATTTAGGTTAGGCGTTGGAGTTAGACAAATTCTGGTTAGGTCTTCGATTCTAATAGTCTGGTTCTGTTCGGGTTAAGCATATGTTTACTATTACTTGTAGTCACAAAACCATTTACAATCTCTAACCTCTCCCATGAATTAGGTTTACAACCAAGAAAACTAACATGGCACTACTCTGATTCTCATCTACA - >AT3G12070.2
GATTTAAGTGTTAATAAAAATTATACCAGCTAGGGATTTTTAACCCATTGAAGGAAAAACTAAAGTTGAATCAAGCTAACTTTAAAAATCGTTGGTGTTGTTTCTTCTGTTCGTGCCAAGTTTATTGAATCCCGATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAGAGTTCACTGGATCGAGAAAGCAAAGCTTGTCAAGTTTATCTTGGACTCTCAGGACATGGATAACGGAGGCATCTCAGATAGACCCAGCTATACTGTTGATATCTTCCACACCTACTTTGGAGTTGCGGGGCTCTCTCTTCTCGAGTATCCTGGAGTCAAAACAATTGATCCTGCCTACGCTTTGCCTGTCCATGTCATCAACCGGATTCTCTTCACCAAATGATTCTTCATCAGAACTCAGATTTAGGTTAGGCGTTGGAGTTAGACAAATTCTGGTTAGGTCTTCGATTCTAATAGTCTGGTTCTGTTCGGGTTAAGCATATGTTTACTATTACTTGTAGTCACAAAACCATTTACAATCTCTAACCTCTCCCATGAATTAGGTTTACAACCAAGAAAACTAACATGGCACTACTCTGATTCTCATCTACA
CDS Sequence
- >AT3G12070.4
ATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAG - >AT3G12070.3
ATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAG - >AT3G12070.1
ATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAG - >AT3G12070.2
ATGGCAGACAAGCTCGTAGCTGGCAAGCATCTTCGTTACATTCTGAATTTGATGGCAGAAAAGAAAAAAGAGAGTTTTGAGTCTGTGGTTATGGATCATCTGAGAATGAATGGTGCATATTGGGGACTAACCACACTGGCTTTACTCGACAAGCTTGGTTCTGTTTCCGAAGATGAAGTTGTGTCATGGGTCATGACCTGCCAGCATGAGTCTGGTGGCTTTGCCGGTAATACTGGCCATGATCCGCATGTTTTGTATACACTCAGTGCTGTACAAATCTTGGCCCTCTTCGACAAACTCAACATTCTTGATGTTGAAAAAGTTTCAAATTATATTGCTGGGTTACAGAATGAAGATGGATCCTTCTCAGGAGATATATGGGGCGAAGTAGATACAAGGTTTTCTTACATAGCTATATGCTGCCTCTCAATATTAAAATGTCTTGATAAAATCAATGTGAAGAAGGCTGTTGATTACATTGTGAGCTGCAAAAACCTGGATGGTGGTTTTGGGTGCTCACCTGGAGCGGAGTCTCATGCAGGACAGATTTTCTGTTGTGTGGGTGCTCTTGCTATCACCGGGAATCTCCATCGTGTTGATAAGGACTTACTTGGATGGTGGTTATGTGAAAGACAAGACTACGAGTCTGGAGGTTTAAATGGACGACCTGAGAAACTCCCTGATCTTAATCATGATCGATAG
Protein Sequence
- >AT3G12070.4
MADKLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDLNHDR - >AT3G12070.3
MADKLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDLNHDR - >AT3G12070.1
MADKLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDLNHDR - >AT3G12070.2
MADKLVAGKHLRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLPDLNHDR