Information report for AT3G12060
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0020003 — plant ovule — óvulo vegetal (Spanish, exact), 胚珠 (Japanese, exact), Poaceae ovule (narrow), Zea ovule (narrow)
Functional Keywords
Literature and News
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Expression-based discovery of candidate ovule development regulators through transcriptional profiling of ovule mutants. DOI: 10.1186/1471-2229-9-29 ; PMID: 19291320
- TRICHOME BIREFRINGENCE and its homolog AT5G01360 encode plant-specific DUF231 proteins required for cellulose biosynthesis in Arabidopsis. DOI: 10.1104/pp.110.153320 ; PMID: 20388664
- Involvement of TBL/DUF231 proteins into cell wall biology. DOI: 10.4161/psb.5.8.12414 ; PMID: 20657172
- Molecular Mechanism of Polysaccharide Acetylation by the Arabidopsis Xylan O-acetyltransferase XOAT1. DOI: 10.1105/tpc.20.00028 ; PMID: 32354790
Gene Resources
- UniProt: A0A178VGN3
- EMBL: CACRSJ010000106, CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VGN3
- EnsemblPlants: AT3G12060.1
- Gramene: AT3G12060.1
- KEGG: ath:AT3G12060
- Orthologous matrix: ENISCPD
- ExpressionAtlas: AT3G12060
- InterPro: IPR025846, IPR026057, IPR029962
- PANTHER: PTHR32285, PTHR32285:SF164
- OrthoDB: A0A178VGN3
- SWISS-MODEL: A0A178VGN3
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T8K23Z, arahy.Tifrunner.gnm1.ann1.VG61HV, arahy.Tifrunner.gnm1.ann1.XZ6HV0, arahy.Tifrunner.gnm1.ann1.YRL4N9, arahy.Tifrunner.gnm1.ann1.8E8ZZ7, arahy.Tifrunner.gnm1.ann1.RLV9X9
- Daucus carota DCAR_017590, DCAR_013290
- Oryza sativa OsTBL2, OsTBL1
- Setaria viridis Sevir.9G255600.1.p
- Vitis vinifera VIT_219s0014g00510
Sequences
cDNA Sequence
- >AT3G12060.1
GCAAAACCAAGAGTCAGAGAAAAAGATTCTCACGCGCCAAAAAACTCCCTCGCCATGGCGTTGGACTCCGTTAAGCATTTGCCTATTCACGGCGTCTCCGCCTTCTCCTCCGTCACCGTCGAAATCAAAAGCTTTTTCTCCACCGTGAAACCAAGAAAAACTTCAACTTTCGTCTACGCTTTCGTAGTAACTTTCGTTGCCTTGACTGTTTTCTTAGCCTTTAGTCCTTCTCCCATCACAGTCGCACTCGCTCCTTCCATTTCTTCCTATGTTCTCCCTAATATCACTGTCTCGAATTCATCCAACTCTTCACCGTCGAGTCTCGATTCTAATTTCACCACATTGCGTACACCGGCGCCGGAAAATCTCACTGCAGTTACTAAAAACTTAACCTTTGAGTCCCCCGTCGCAAATGGGACAACGGACACAAATGCTAAAACCATCACTATTCAGTTCCAGACCGGTCATGCAAAGGAAAACATATCGTGTCCTGACAACAAAACTGCTCGAGATTTGGACACACATGGAGCAAGGAAAGCACCTCTGTCGGAAGTTCTAGCTGTCAATTCGACTGCTTCTCCGAAGCGAAAACAGAGAAGGAAGTCGTCGCTGAGAAAGGTGATCGAGTCTCTGAAGAGTTGTGAGTTTTTCGAGGGAGATTGGGTCAAAGACGATTCGTATCCGCTCTACAAACCCGGTTCGTGTAATCTGATCGATGAACAGTTTAATTGTATCTCAAACGGAAGACCTGACGTGGATTTCCAGAAATTGAAATGGAAACCAAAGCAATGTTCTTTACCAAGGTTAAATGGAGGTAAATTGCTTGAGATGATTAGAGGAAGAAGGCTAGTGTTTGTTGGAGATTCGCTGAATAGAAACATGTGGGAGTCTTTGGTTTGCATTCTTAAAGGATCAGTGAAAGACGAGAGTCAAGTCTTTGAGGCTCATGGAAGGCATCAATTCCGTTGGGAGGCTGAGTACTCTTTCGTCTTTAAAGATTATAATTGCACTGTGGAGTTCTTTGCATCGCCTTTCTTGGTTCAAGAATGGGAAGTTACAGAGAAGAACGGGACGAAGAAGGAGACTTTGCGGTTAGATTTGGTCGGGAAGTCATCGGAGCAGTACAAAGGAGCGGATATTCTTGTATTCAATACCGGACATTGGTGGACTCATGAGAAAACTTCCAAAGGGGAGGATTATTATCAAGAAGGGAGCACTGTTCACCCGAAACTCGATGTGGATGAAGCTTTCCGAAAAGCATTGACAACTTGGGGTCGATGGGTTGATAAGAATGTGAATCCAAAGAAGTCCCTTGTTTTCTTCCGTGGTTATTCCCCGTCACATTTCAGCGGCGGGCAATGGAATGCGGGAGGAGCATGCGATGATGAAACAGAACCGATCAAGAACGAGACTTACCTAACTCCTTACATGTTGAAGATGGAGATACTTGAAAGAGTTCTCAGGGGAATGAAAACACCAGTCACGTATCTCAACATCACGAGGTTAACTGATTACAGGAAGGACGCTCACCCATCGATATACCGGAAACAAAAACTATCCGCAGAAGAAAGTAAATCACCATTGTTGTACCAAGACTGTAGCCACTGGTGTCTCCCTGGGGTGCCTGATTCTTGGAACGAAATTTTCTATGCCGAGTTACTTGTAAAGCTTGACCAGCTTGGTGGCAAAAGACGGCGGAAAGCCCTAAAAGATCATAGGAGTTGAATCTGCATCATTTTAGATCAACACAGAACTTTAAAGGGATAAAAAGAAAAGAAACACTGATGTAGATGAGAATCAGAGTAGTGCCATGTTAGTTTTCTTGGTTGTAAACCTAATTCATGGGAGAGGTTAGAGATTGTAAATGGTTTTGTGACTACAAGTAATAGTAAACATATGCTTAACCCGAACAGAACCAGACTATTAGAATCGAAGACCTAACCAGAATTTGTCTAACTCCAACGCCTAACCTAAATCTGAGTTCTGATGAAGAATCATTTGGTGAAGAGAATCCGGTTGATGACATGGACAGGCAAAGCGTAGGCAGGATCAATTGTTTTGACTCCAGGATACTCGAGAAGAGAGA
CDS Sequence
- >AT3G12060.1
ATGGCGTTGGACTCCGTTAAGCATTTGCCTATTCACGGCGTCTCCGCCTTCTCCTCCGTCACCGTCGAAATCAAAAGCTTTTTCTCCACCGTGAAACCAAGAAAAACTTCAACTTTCGTCTACGCTTTCGTAGTAACTTTCGTTGCCTTGACTGTTTTCTTAGCCTTTAGTCCTTCTCCCATCACAGTCGCACTCGCTCCTTCCATTTCTTCCTATGTTCTCCCTAATATCACTGTCTCGAATTCATCCAACTCTTCACCGTCGAGTCTCGATTCTAATTTCACCACATTGCGTACACCGGCGCCGGAAAATCTCACTGCAGTTACTAAAAACTTAACCTTTGAGTCCCCCGTCGCAAATGGGACAACGGACACAAATGCTAAAACCATCACTATTCAGTTCCAGACCGGTCATGCAAAGGAAAACATATCGTGTCCTGACAACAAAACTGCTCGAGATTTGGACACACATGGAGCAAGGAAAGCACCTCTGTCGGAAGTTCTAGCTGTCAATTCGACTGCTTCTCCGAAGCGAAAACAGAGAAGGAAGTCGTCGCTGAGAAAGGTGATCGAGTCTCTGAAGAGTTGTGAGTTTTTCGAGGGAGATTGGGTCAAAGACGATTCGTATCCGCTCTACAAACCCGGTTCGTGTAATCTGATCGATGAACAGTTTAATTGTATCTCAAACGGAAGACCTGACGTGGATTTCCAGAAATTGAAATGGAAACCAAAGCAATGTTCTTTACCAAGGTTAAATGGAGGTAAATTGCTTGAGATGATTAGAGGAAGAAGGCTAGTGTTTGTTGGAGATTCGCTGAATAGAAACATGTGGGAGTCTTTGGTTTGCATTCTTAAAGGATCAGTGAAAGACGAGAGTCAAGTCTTTGAGGCTCATGGAAGGCATCAATTCCGTTGGGAGGCTGAGTACTCTTTCGTCTTTAAAGATTATAATTGCACTGTGGAGTTCTTTGCATCGCCTTTCTTGGTTCAAGAATGGGAAGTTACAGAGAAGAACGGGACGAAGAAGGAGACTTTGCGGTTAGATTTGGTCGGGAAGTCATCGGAGCAGTACAAAGGAGCGGATATTCTTGTATTCAATACCGGACATTGGTGGACTCATGAGAAAACTTCCAAAGGGGAGGATTATTATCAAGAAGGGAGCACTGTTCACCCGAAACTCGATGTGGATGAAGCTTTCCGAAAAGCATTGACAACTTGGGGTCGATGGGTTGATAAGAATGTGAATCCAAAGAAGTCCCTTGTTTTCTTCCGTGGTTATTCCCCGTCACATTTCAGCGGCGGGCAATGGAATGCGGGAGGAGCATGCGATGATGAAACAGAACCGATCAAGAACGAGACTTACCTAACTCCTTACATGTTGAAGATGGAGATACTTGAAAGAGTTCTCAGGGGAATGAAAACACCAGTCACGTATCTCAACATCACGAGGTTAACTGATTACAGGAAGGACGCTCACCCATCGATATACCGGAAACAAAAACTATCCGCAGAAGAAAGTAAATCACCATTGTTGTACCAAGACTGTAGCCACTGGTGTCTCCCTGGGGTGCCTGATTCTTGGAACGAAATTTTCTATGCCGAGTTACTTGTAAAGCTTGACCAGCTTGGTGGCAAAAGACGGCGGAAAGCCCTAAAAGATCATAGGAGTTGA
Protein Sequence
- >AT3G12060.1
MALDSVKHLPIHGVSAFSSVTVEIKSFFSTVKPRKTSTFVYAFVVTFVALTVFLAFSPSPITVALAPSISSYVLPNITVSNSSNSSPSSLDSNFTTLRTPAPENLTAVTKNLTFESPVANGTTDTNAKTITIQFQTGHAKENISCPDNKTARDLDTHGARKAPLSEVLAVNSTASPKRKQRRKSSLRKVIESLKSCEFFEGDWVKDDSYPLYKPGSCNLIDEQFNCISNGRPDVDFQKLKWKPKQCSLPRLNGGKLLEMIRGRRLVFVGDSLNRNMWESLVCILKGSVKDESQVFEAHGRHQFRWEAEYSFVFKDYNCTVEFFASPFLVQEWEVTEKNGTKKETLRLDLVGKSSEQYKGADILVFNTGHWWTHEKTSKGEDYYQEGSTVHPKLDVDEAFRKALTTWGRWVDKNVNPKKSLVFFRGYSPSHFSGGQWNAGGACDDETEPIKNETYLTPYMLKMEILERVLRGMKTPVTYLNITRLTDYRKDAHPSIYRKQKLSAEESKSPLLYQDCSHWCLPGVPDSWNEIFYAELLVKLDQLGGKRRRKALKDHRS