Information report for AT3G11980
Gene Details
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Functional Descriptions
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome-wide analysis of spatial gene expression in Arabidopsis flowers. DOI: 10.1105/tpc.021741 ; PMID: 15100403
- Profiling candidate genes involved in wax biosynthesis in Arabidopsis thaliana by microarray analysis. DOI: 10.1016/j.bbalip.2005.04.002 ; PMID: 15914083
- Regulation of Arabidopsis tapetum development and function by DYSFUNCTIONAL TAPETUM1 (DYT1) encoding a putative bHLH transcription factor. DOI: 10.1242/dev.02463 ; PMID: 16831835
- Transcriptional coordination of the metabolic network in Arabidopsis. DOI: 10.1104/pp.106.080358 ; PMID: 16920875
- CYP703 is an ancient cytochrome P450 in land plants catalyzing in-chain hydroxylation of lauric acid to provide building blocks for sporopollenin synthesis in pollen. DOI: 10.1105/tpc.106.045948 ; PMID: 17496121
- Global expression profiling applied to the analysis of Arabidopsis stamen development. DOI: 10.1104/pp.107.104422 ; PMID: 17905860
- ROXY1 and ROXY2, two Arabidopsis glutaredoxin genes, are required for anther development. DOI: 10.1111/j.1365-313X.2007.03375.x ; PMID: 18036205
- An extensive (co-)expression analysis tool for the cytochrome P450 superfamily in Arabidopsis thaliana. DOI: 10.1186/1471-2229-8-47 ; PMID: 18433503
- A novel fatty Acyl-CoA Synthetase is required for pollen development and sporopollenin biosynthesis in Arabidopsis. DOI: 10.1105/tpc.108.062513 ; PMID: 19218397
- CYP704B1 is a long-chain fatty acid omega-hydroxylase essential for sporopollenin synthesis in pollen of Arabidopsis. DOI: 10.1104/pp.109.144469 ; PMID: 19700560
- The ABORTED MICROSPORES regulatory network is required for postmeiotic male reproductive development in Arabidopsis thaliana. DOI: 10.1105/tpc.109.071803 ; PMID: 20118226
- Brassinosteroids control male fertility by regulating the expression of key genes involved in Arabidopsis anther and pollen development. DOI: 10.1073/pnas.0912333107 ; PMID: 20231470
- An ABCG/WBC-type ABC transporter is essential for transport of sporopollenin precursors for exine formation in developing pollen. DOI: 10.1111/j.1365-313X.2010.04412.x ; PMID: 21223384
- A large-scale genetic screen in Arabidopsis to identify genes involved in pollen exine production. DOI: 10.1104/pp.111.179523 ; PMID: 21849515
- The Arabidopsis LFR gene is required for the formation of anther cell layers and normal expression of key regulatory genes. DOI: 10.1093/mp/sss024 ; PMID: 22461668
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Pollen wall development: the associated enzymes and metabolic pathways. DOI: 10.1111/j.1438-8677.2012.00706.x ; PMID: 23252839
- Trace concentrations of imazethapyr (IM) affect floral organs development and reproduction in Arabidopsis thaliana: IM-induced inhibition of key genes regulating anther and pollen biosynthesis. DOI: 10.1007/s10646-014-1369-5 ; PMID: 25348600
- The DYT1-interacting proteins bHLH010, bHLH089 and bHLH091 are redundantly required for Arabidopsis anther development and transcriptome. DOI: 10.1111/tpj.12942 ; PMID: 26216374
- The Regulation of Sporopollenin Biosynthesis Genes for Rapid Pollen Wall Formation. DOI: 10.1104/pp.18.00219 ; PMID: 30018171
- IMPERFECTIVE EXINE FORMATION (IEF) is required for exine formation and male fertility in Arabidopsis. DOI: 10.1007/s11103-020-01114-8 ; PMID: 33481140
- Loss of THIN EXINE2 disrupts multiple processes in the mechanism of pollen exine formation. DOI: 10.1093/plphys/kiab244 ; PMID: 34618131
- ROXY1 and ROXY2, two Arabidopsis glutaredoxin genes, are required for anther development. DOI: 10.1111/j.1365-313X.2007.03375.x ; PMID: 18036205
Gene Resources
- UniProt: A0A178VDD9
- EMBL: CACSHJ010000089, LUHQ01000003
- AlphaFoldDB: A0A178VDD9
- EnsemblPlants: AT3G11980.1
- Gramene: AT3G11980.1
- KEGG: ath:AT3G11980
- Orthologous matrix: WRDAQER
- ExpressionAtlas: AT3G11980
- InterPro: IPR013120, IPR026055, IPR033640
- PANTHER: PTHR11011, PTHR11011:SF45
- SUPFAM: SSF51735
- Gene3D: 3.40.50.720
- OrthoDB: A0A178VDD9
- SWISS-MODEL: A0A178VDD9
- Conserved Domain Database: cd05236, cd09071
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A8VW0N
- Oryza sativa DPW
Sequences
cDNA Sequence
- >AT3G11980.1
AATTAATTCTGTTCTTGGTTTACTTAATCTTCTTTCTAGTTAAGTATATTCTTGTTGCTCATCACCAAAGCTTGTGATGGAGGCTCTCTTCTTGAGTTCTTCTTCTTCCTCCATTGTAGCGTCAAACAAGCTTACTAGGTTACACAACCATTGTGTCTGGTCTACAGTGATTAGAGATAAGAAAAGGTTCGGTCCCACTTGGTGCCGTGTAGGTGGTGGTGGTGATGGTGGGAGAAACAGTAACGCAGAGAGGCCTATTCGGGTTTCTTCGCTTTTGAAAGACAGAGGTCAGGTACTGATTAGGGAACAGAGTTCGCCGGCTATGGATGCTGAGACATTGGTTCTGTCTCCAAACGGGAATGGGAGAACCATTGAGATCAATGGAGTAAAGACTTTGATGCCTTTTAGTGGCGCTTCTATGGTGGGGATGAAAGAAGGACTTGGCATAATCAGTTTCCTCCAAGGGAAGAAGTTTCTAATCACTGGCTCGACCGGTTTCTTAGCTAAAGTACTGATTGAGAAAGTCTTGAGAATGGCTCCTGATGTCAGCAAGATATATCTCTTGATTAAAGCCAAAAGCAAAGAAGCTGCGATCGAGCGGCTAAAGAACGAGGTGTTAGATGCAGAGCTTTTTAATACTCTAAAAGAGACTCATGGAGCATCTTACATGTCTTTCATGTTAACTAAACTCATCCCTGTGACCGGAAACATTTGCGATTCAAACATTGGGTTGCAAGCAGATTCAGCTGAAGAGATTGCGAAAGAAGTTGATGTTATAATCAATTCTGCTGCTAATACAACCTTCAATGAAAGATACGATGTTGCTCTGGACATCAACACAAGAGGGCCCGGTAATCTCATGGGATTCGCCAAGAAGTGCAAGAAACTCAAACTGTTCTTGCAAGTATCCACAGCTTATGTGAATGGACAAAGACAAGGAAGGATCATGGAGAAGCCATTTTCTATGGGAGATTGTATAGCAACAGAGAACTTCCTCGAAGGAAACAGAAAAGCATTAGATGTTGATAGAGAGATGAAGTTAGCTCTTGAAGCTGCTAGAAAAGGGACTCAAAATCAAGATGAGGCACAGAAGATGAAGGATCTCGGTCTAGAGCGGGCAAGATCATATGGATGGCAAGACACTTATGTTTTCACCAAAGCAATGGGTGAGATGATGATCAATAGCACTCGAGGAGACGTACCTGTTGTTATTATAAGGCCTAGCGTCATCGAAAGCACTTACAAAGATCCTTTCCCTGGATGGATGGAAGGAAACAGGATGATGGATCCTATAGTTTTATGTTACGGGAAGGGGCAACTCACGGGGTTTTTGGTTGATCCAAAAGGAGTTCTTGATGTAGTTCCTGCTGATATGGTTGTTAATGCAACGTTAGCTGCTATAGCAAAGCATGGAATGGCAATGTCAGATCCGGAACCTGAAATAAACGTGTATCAGATCGCTTCTTCGGCGATAAACCCGCTGGTTTTCGAAGACTTAGCGGAGCTTCTTTATAACCACTACAAAACATCCCCATGCATGGACTCTAAAGGTGATCCTATTATGGTGCGTTTGATGAAACTTTTCAATTCCGTTGATGATTTCTCGGATCATTTGTGGAGAGATGCTCAAGAACGGAGTGGGTTGATGAGTGGTATGAGTTCAGTGGATAGTAAGATGATGCAGAAGCTAAAGTTTATATGCAAGAAATCTGTTGAACAAGCCAAACACCTTGCTACTATTTATGAGCCATACACTTTCTATGGTGGAAGATTTGATAACAGCAATACACAGAGATTAATGGAGAATATGTCAGAGGACGAGAAGAGAGAATTTGGATTTGATGTTGGAAGCATTAACTGGACGGACTACATTACAAACGTTCACATTCCCGGTTTAAGAAGGCATGTCTTGAAAGGAAGAGCTTAACTTTGAATCTCACTAAACCAGACCAAACAGAATCGATCCCTTCTTTTATCTTTTTATCTTTTTCTTTTTTCATTACGTGTAATCGTGTTGTGTCTAATATATCAGTTTGATTTGTAATAATTTGAAAAAAACCGGAAATGTTGTTATCTTTAAGTTTGCCCAAAATCTATAGTCATGTTCGATTCAAGAC
CDS Sequence
- >AT3G11980.1
ATGGAGGCTCTCTTCTTGAGTTCTTCTTCTTCCTCCATTGTAGCGTCAAACAAGCTTACTAGGTTACACAACCATTGTGTCTGGTCTACAGTGATTAGAGATAAGAAAAGGTTCGGTCCCACTTGGTGCCGTGTAGGTGGTGGTGGTGATGGTGGGAGAAACAGTAACGCAGAGAGGCCTATTCGGGTTTCTTCGCTTTTGAAAGACAGAGGTCAGGTACTGATTAGGGAACAGAGTTCGCCGGCTATGGATGCTGAGACATTGGTTCTGTCTCCAAACGGGAATGGGAGAACCATTGAGATCAATGGAGTAAAGACTTTGATGCCTTTTAGTGGCGCTTCTATGGTGGGGATGAAAGAAGGACTTGGCATAATCAGTTTCCTCCAAGGGAAGAAGTTTCTAATCACTGGCTCGACCGGTTTCTTAGCTAAAGTACTGATTGAGAAAGTCTTGAGAATGGCTCCTGATGTCAGCAAGATATATCTCTTGATTAAAGCCAAAAGCAAAGAAGCTGCGATCGAGCGGCTAAAGAACGAGGTGTTAGATGCAGAGCTTTTTAATACTCTAAAAGAGACTCATGGAGCATCTTACATGTCTTTCATGTTAACTAAACTCATCCCTGTGACCGGAAACATTTGCGATTCAAACATTGGGTTGCAAGCAGATTCAGCTGAAGAGATTGCGAAAGAAGTTGATGTTATAATCAATTCTGCTGCTAATACAACCTTCAATGAAAGATACGATGTTGCTCTGGACATCAACACAAGAGGGCCCGGTAATCTCATGGGATTCGCCAAGAAGTGCAAGAAACTCAAACTGTTCTTGCAAGTATCCACAGCTTATGTGAATGGACAAAGACAAGGAAGGATCATGGAGAAGCCATTTTCTATGGGAGATTGTATAGCAACAGAGAACTTCCTCGAAGGAAACAGAAAAGCATTAGATGTTGATAGAGAGATGAAGTTAGCTCTTGAAGCTGCTAGAAAAGGGACTCAAAATCAAGATGAGGCACAGAAGATGAAGGATCTCGGTCTAGAGCGGGCAAGATCATATGGATGGCAAGACACTTATGTTTTCACCAAAGCAATGGGTGAGATGATGATCAATAGCACTCGAGGAGACGTACCTGTTGTTATTATAAGGCCTAGCGTCATCGAAAGCACTTACAAAGATCCTTTCCCTGGATGGATGGAAGGAAACAGGATGATGGATCCTATAGTTTTATGTTACGGGAAGGGGCAACTCACGGGGTTTTTGGTTGATCCAAAAGGAGTTCTTGATGTAGTTCCTGCTGATATGGTTGTTAATGCAACGTTAGCTGCTATAGCAAAGCATGGAATGGCAATGTCAGATCCGGAACCTGAAATAAACGTGTATCAGATCGCTTCTTCGGCGATAAACCCGCTGGTTTTCGAAGACTTAGCGGAGCTTCTTTATAACCACTACAAAACATCCCCATGCATGGACTCTAAAGGTGATCCTATTATGGTGCGTTTGATGAAACTTTTCAATTCCGTTGATGATTTCTCGGATCATTTGTGGAGAGATGCTCAAGAACGGAGTGGGTTGATGAGTGGTATGAGTTCAGTGGATAGTAAGATGATGCAGAAGCTAAAGTTTATATGCAAGAAATCTGTTGAACAAGCCAAACACCTTGCTACTATTTATGAGCCATACACTTTCTATGGTGGAAGATTTGATAACAGCAATACACAGAGATTAATGGAGAATATGTCAGAGGACGAGAAGAGAGAATTTGGATTTGATGTTGGAAGCATTAACTGGACGGACTACATTACAAACGTTCACATTCCCGGTTTAAGAAGGCATGTCTTGAAAGGAAGAGCTTAA
Protein Sequence
- >AT3G11980.1
MEALFLSSSSSSIVASNKLTRLHNHCVWSTVIRDKKRFGPTWCRVGGGGDGGRNSNAERPIRVSSLLKDRGQVLIREQSSPAMDAETLVLSPNGNGRTIEINGVKTLMPFSGASMVGMKEGLGIISFLQGKKFLITGSTGFLAKVLIEKVLRMAPDVSKIYLLIKAKSKEAAIERLKNEVLDAELFNTLKETHGASYMSFMLTKLIPVTGNICDSNIGLQADSAEEIAKEVDVIINSAANTTFNERYDVALDINTRGPGNLMGFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFSMGDCIATENFLEGNRKALDVDREMKLALEAARKGTQNQDEAQKMKDLGLERARSYGWQDTYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQLTGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLYNHYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLWRDAQERSGLMSGMSSVDSKMMQKLKFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQRLMENMSEDEKREFGFDVGSINWTDYITNVHIPGLRRHVLKGRA