Information report for AT3G11630
Gene Details
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Functional Descriptions
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- 2cpa 2cpb — Change in redox behavior of TrxL2.1 and TrxL2.2 by HL/dark treatments.
- SALK_118663C — Change in redox behavior of TrxL2.1 and TrxL2.2 by HL/dark treatments.
- delta2cp — Slightly lower fresh weight and photosynthetic pigment content than wild type.
Functional Keywords
Literature and News
- The function of the chloroplast 2-cysteine peroxiredoxin in peroxide detoxification and its regulation. DOI: NA ; PMID: 11997378
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis. DOI: 10.1104/pp.010017 ; PMID: 12529539
- The age of the Arabidopsis thaliana genome duplication. DOI: 10.1023/a:1023001130337 ; PMID: 12777046
- Resemblance and dissemblance of Arabidopsis type II peroxiredoxins: similar sequences for divergent gene expression, protein localization, and activity. DOI: 10.1104/pp.103.022533 ; PMID: 12913160
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The antioxidant status of photosynthesizing leaves under nutrient deficiency: redox regulation, gene expression and antioxidant activity in Arabidopsis thaliana. DOI: 10.1111/j.0031-9317.2004.0272.x ; PMID: 15032878
- Specific changes in the Arabidopsis proteome in response to bacterial challenge: differentiating basal and R-gene mediated resistance. DOI: 10.1016/j.phytochem.2004.04.005 ; PMID: 15276439
- The mitochondrial type II peroxiredoxin F is essential for redox homeostasis and root growth of Arabidopsis thaliana under stress. DOI: 10.1074/jbc.M413189200 ; PMID: 15632145
- The plant multigenic family of thiol peroxidases. DOI: 10.1016/j.freeradbiomed.2004.07.037 ; PMID: 15890615
- Identification of plant glutaredoxin targets. DOI: 10.1089/ars.2005.7.919 ; PMID: 15998247
- Stress-induced protein S-glutathionylation in Arabidopsis. DOI: 10.1104/pp.104.058917 ; PMID: 16055689
- The function of peroxiredoxins in plant organelle redox metabolism. DOI: 10.1093/jxb/erj160 ; PMID: 16606633
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show and long-term exposure to low temperature. DOI: 10.1111/j.1365-313X.2006.02821.x ; PMID: 16923014
- Regulation of gene expression by photosynthetic signals triggered through modified CO2 availability. DOI: 10.1186/1471-2229-6-15 ; PMID: 16916444
- Regulation of peroxiredoxin expression versus expression of Halliwell-Asada-Cycle enzymes during early seedling development of Arabidopsis thaliana. DOI: 10.1007/s11120-006-9087-3 ; PMID: 16915352
- Rice NTRC is a high-efficiency redox system for chloroplast protection against oxidative damage. DOI: 10.1105/tpc.106.041541 ; PMID: 16891402
- Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. DOI: 10.1104/pp.106.086231 ; PMID: 17028151
- Comparative proteomic approaches for the isolation of proteins interacting with thioredoxin. DOI: 10.1002/pmic.200600443 ; PMID: 17163439
- The Arabidopsis thaliana sulfiredoxin is a plastidic cysteine-sulfinic acid reductase involved in the photooxidative stress response. DOI: 10.1111/j.1365-313X.2006.02969.x ; PMID: 17217469
- Alternative and effective proteomic analysis in Arabidopsis. DOI: 10.1002/pmic.200700346 ; PMID: 17828791
- The peroxiredoxin and glutathione peroxidase families in Chlamydomonas reinhardtii. DOI: 10.1534/genetics.107.086041 ; PMID: 18493039
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- NADPH-dependent thioredoxin reductase and 2-Cys peroxiredoxins are needed for the protection of Mg-protoporphyrin monomethyl ester cyclase. DOI: 10.1016/j.febslet.2008.07.006 ; PMID: 18625226
- Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression. DOI: 10.1104/pp.109.152413 ; PMID: 20118269
- Comparison of the chloroplast peroxidase system in the chlorophyte Chlamydomonas reinhardtii, the bryophyte Physcomitrella patens, the lycophyte Selaginella moellendorffii and the seed plant Arabidopsis thaliana. DOI: 10.1186/1471-2229-10-133 ; PMID: 20584316
- Functional analysis of the pathways for 2-Cys peroxiredoxin reduction in Arabidopsis thaliana chloroplasts. DOI: 10.1093/jxb/erq218 ; PMID: 20616155
- The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants. DOI: 10.1016/j.cell.2014.01.039 ; PMID: 24529374
- Natural Variation of Cold Deacclimation Correlates with Variation of Cold-Acclimation of the Plastid Antioxidant System in Arabidopsis thaliana Accessions. DOI: 10.3389/fpls.2016.00305 ; PMID: 27014325
- The redox-sensitive module of cyclophilin 20-3, 2-cysteine peroxiredoxin and cysteine synthase integrates sulfur metabolism and oxylipin signaling in the high light acclimation response. DOI: 10.1111/tpj.13622 ; PMID: 28644561
- Specificity versus redundancy in the RAP2.4 transcription factor family of Arabidopsis thaliana: transcriptional regulation of genes for chloroplast peroxidases. DOI: 10.1186/s12870-017-1092-5 ; PMID: 28835225
- Thioredoxin-like2/2-Cys peroxiredoxin redox cascade supports oxidative thiol modulation in chloroplasts. DOI: 10.1073/pnas.1808284115 ; PMID: 30104347
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
- GSM2, a transaldolase, contributes to reactive oxygen species homeostasis in Arabidopsis. DOI: 10.1007/s11103-020-01022-x ; PMID: 32564178
- The function of the chloroplast 2-cysteine peroxiredoxin in peroxide detoxification and its regulation. DOI: NA ; PMID: 11997378
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Divergent light-, ascorbate-, and oxidative stress-dependent regulation of expression of the peroxiredoxin gene family in Arabidopsis. DOI: 10.1104/pp.010017 ; PMID: 12529539
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The function of peroxiredoxins in plant organelle redox metabolism. DOI: 10.1093/jxb/erj160 ; PMID: 16606633
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- The chloroplast lumen and stromal proteomes of Arabidopsis thaliana show and long-term exposure to low temperature. DOI: 10.1111/j.1365-313X.2006.02821.x ; PMID: 16923014
- Modifications to the Arabidopsis defense proteome occur prior to significant transcriptional change in response to inoculation with Pseudomonas syringae. DOI: 10.1104/pp.106.086231 ; PMID: 17028151
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Identification of multiple salicylic acid-binding proteins using two high throughput screens. DOI: 10.3389/fpls.2014.00777 ; PMID: 25628632
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VJT2
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A178VJT2
- EnsemblPlants: AT3G11630.1
- Gramene: AT3G11630.1
- KEGG: ath:AT3G11630
- Orthologous matrix: RTICVDY
- ExpressionAtlas: AT3G11630
- InterPro: IPR000866, IPR013766, IPR019479
- PANTHER: PTHR10681, PTHR10681:SF178
- SUPFAM: SSF52833
- PROSITE: PS51352
- Gene3D: 3.40.30.10
- OrthoDB: A0A178VJT2
- SWISS-MODEL: A0A178VJT2
- Conserved Domain Database: cd03015
Homologs
- Oryza sativa BAS1;OsTPX, Os1-CysPrxA, Os1-CysPrxB
- Triticum aestivum Ta2CP
Sequences
cDNA Sequence
- >AT3G11630.1
CTCGTTTTGAGTAACGCGACGTCGTTTTATGAGTTTGGGTGTCGTCAGGCTTATCTCCACCTCATACTTCCACTACAAAGAGAGGTGATTGACAGATAGATAAGAGTGTTTGGTAGCTCAGACTCAGAGAGTCACAAAGTGTGTGTAGCAGCAATGGCGTCTGTTGCTTCTTCAACTACTCTCATCTCTTCTCCCTCTTCTAGGGTTTTTCCAGCAAAGTCTTCACTTTCCTCTCCATCTGTTTCTTTCCTTCGAACCCTTTCTTCTCCTTCCGCATCTGCTTCTCTCCGCTCCGGATTTGCTCGACGCTCTTCCCTCAGCTCCACTTCTCGTCGGAGCTTTGCTGTCAAAGCCCAGGCCGATGATCTTCCACTGGTTGGAAACAAGGCGCCTGATTTTGAGGCAGAGGCTGTGTTTGATCAAGAGTTCATCAAGGTTAAGCTCTCTGATTACATTGGAAAGAAGTATGTGATTCTCTTTTTCTACCCATTGGACTTTACTTTCGTCTGCCCAACAGAGATTACTGCCTTCAGTGACCGGCATTCAGAATTTGAGAAGTTGAACACCGAAGTATTAGGTGTTTCTGTCGATAGTGTGTTCTCTCACCTTGCATGGGTCCAAACAGACAGGAAATCTGGAGGGCTTGGTGATCTGAACTATCCCCTTATTTCAGATGTCACTAAATCAATCTCAAAGTCGTTCGGAGTGCTCATCCATGATCAGGGAATAGCACTGAGAGGACTTTTCATAATCGACAAGGAAGGAGTGATCCAACATTCCACCATCAACAATCTTGGTATTGGCCGAAGCGTTGATGAGACAATGAGAACCCTCCAGGCATTACAGTACATCCAGGAAAACCCGGATGAAGTCTGCCCAGCAGGATGGAAGCCGGGTGAGAAGTCAATGAAACCCGACCCAAAACTCAGCAAAGAGTACTTCTCAGCTATTTAGAAACTCTACTATGATAGCAAAAAGGTACAATCTTTGTTATATGTGAGCAGAGTTTTTTTTCTTGTACGCTAAAACAATCCTTTGTTTGATTCTCACTTTGTCCCCAAAATTATAATAAAAAACTTTTTCCGTTAATGGAAGTCTTATTGTGTTACGCCTACAAATTCATATTCAGTTGATCACTTACCTAAGCATGTACACTGTACATATTAATGGTAAAAA
CDS Sequence
- >AT3G11630.1
ATGGCGTCTGTTGCTTCTTCAACTACTCTCATCTCTTCTCCCTCTTCTAGGGTTTTTCCAGCAAAGTCTTCACTTTCCTCTCCATCTGTTTCTTTCCTTCGAACCCTTTCTTCTCCTTCCGCATCTGCTTCTCTCCGCTCCGGATTTGCTCGACGCTCTTCCCTCAGCTCCACTTCTCGTCGGAGCTTTGCTGTCAAAGCCCAGGCCGATGATCTTCCACTGGTTGGAAACAAGGCGCCTGATTTTGAGGCAGAGGCTGTGTTTGATCAAGAGTTCATCAAGGTTAAGCTCTCTGATTACATTGGAAAGAAGTATGTGATTCTCTTTTTCTACCCATTGGACTTTACTTTCGTCTGCCCAACAGAGATTACTGCCTTCAGTGACCGGCATTCAGAATTTGAGAAGTTGAACACCGAAGTATTAGGTGTTTCTGTCGATAGTGTGTTCTCTCACCTTGCATGGGTCCAAACAGACAGGAAATCTGGAGGGCTTGGTGATCTGAACTATCCCCTTATTTCAGATGTCACTAAATCAATCTCAAAGTCGTTCGGAGTGCTCATCCATGATCAGGGAATAGCACTGAGAGGACTTTTCATAATCGACAAGGAAGGAGTGATCCAACATTCCACCATCAACAATCTTGGTATTGGCCGAAGCGTTGATGAGACAATGAGAACCCTCCAGGCATTACAGTACATCCAGGAAAACCCGGATGAAGTCTGCCCAGCAGGATGGAAGCCGGGTGAGAAGTCAATGAAACCCGACCCAAAACTCAGCAAAGAGTACTTCTCAGCTATTTAG
Protein Sequence
- >AT3G11630.1
MASVASSTTLISSPSSRVFPAKSSLSSPSVSFLRTLSSPSASASLRSGFARRSSLSSTSRRSFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI