Information report for AT3G11490
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- SALK_152535 — Secondary cell wall pits sparser and larger.
- ropgap3-1 ropgap4-2 — Secondary cell wall pits sparser and larger, pits were less evenly distributed in the secondary cell walls with a wider range of distances between pits.
Functional Keywords
Literature and News
- RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance. DOI: 10.1126/science.1071505 ; PMID: 12065837
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- An Arabidopsis thaliana gene for methylsalicylate biosynthesis, identified by a biochemical genomics approach, has a role in defense. DOI: 10.1046/j.1365-313x.2003.01902.x ; PMID: 14617060
- A Rho-based reaction-diffusion system governs cell wall patterning in metaxylem vessels. DOI: 10.1038/s41598-018-29543-y ; PMID: 30069009
Gene Resources
- UniProt: A0A5S9XB72
- EMBL: CACRSJ010000106, CACSHJ010000089, LR881468
- AlphaFoldDB: A0A5S9XB72
- EnsemblPlants: AT3G11490.1
- Gramene: AT3G11490.1
- KEGG: ath:AT3G11490
- Orthologous matrix: KFADSSC
- ExpressionAtlas: AT3G11490
- InterPro: IPR000095, IPR000198, IPR008936
- PANTHER: PTHR23177, PTHR23177:SF65
- SUPFAM: SSF48350
- PROSITE: PS50108, PS50238, PS51257
- Gene3D: 1.10.555.10, 3.90.810.10
- OrthoDB: A0A5S9XB72
- SWISS-MODEL: A0A5S9XB72
- Conserved Domain Database: cd00132, cd00159
Homologs
- Zea mays GRMZM2G114820_P01
Sequences
cDNA Sequence
- >AT3G11490.1
GAAACAAAAAGTTATTACATAATACAAAATTTGCAAGGTTTCTTTACTTCATAAAGAGAAAGACACCAAAAAAAAAGTAAGTCACAAAATAAAAAAGACAGCTCGACATTCATCTTCCTCGTTAATCCTTCATCTTCTCTCACCAACCTCCACCAATCTCTCTCTCTTTCTTCTCTGTGTATAGGATACGAAGAAGAAGAAGAAAGAAAGAAAGATTGTGAAGTGATAATTACAAGCCACCAACTAATATCCTTTCTTCAATTCAACTCTACGCGTCGCTTAGTAATACCCAAAAAGTTTTAATCTTTTGAGTTTCCCAATTATTTTCCCCAACAGAAATATCATTAATTACTCCACTAATCCAATTTTCTAGGTTTTCTCTTTTTCCCCCTAAAGATTGATTCTTTATAGCCATTGATTTTGACCTCTCCATCACTGTTTTCAGAGAGTACCCATCACTCCAAGATTTGATTTTTTTGGATTATCCTTTGAGAATAATGGCTAAAGTTCTAAAATCGAGCCAATCATGTCATTTCCCTTCACCTTCAAGCTCTTCTTCTACATCATGTGGAGGAGGCAATGATGGTAGTAATAGAGACCCACATTCTCCTTTTAACATTTCTCGTCGTGAGGAAGAGGAAGAAGAGGAAGAGAGAAGCGAGAAAGAGAGAGAAAGATTCGAGCTTTCATCTGCATTGGAGATTCTTGTTTCTGCTATTAGAAGGTCTGTGATTGGTGGGTGTGTTGGTGAAGAGGATCTTTGTTCAATGGAGATTGGTGTTCCTACAGATGTTAGACATGTCGCTCATGTTACCTTTGATCGTTTCCATGGCTTCCTTGGCTTGCCTGTTGAGTTTGAACCTGAAGTCCCTAGACGAGCTCCTAGTGCAAGTGCAACCGTGTTTGGAGTCTCTACTGAATCAATGCAGCTATCTTATGATACTAGAGGGAACATCGTGCCTACGATACTTTTGATGATGCAGAGTCACTTGTACAGTAGAGGCGGATTGCGGGTAGAGGGAATTTTCAGGATTAATGGTGAGAATGGTCAAGAAGAGTACATAAGAGAAGAGTTGAATAAAGGTATTATACCTGATAACATTGATGTCCACTGCTTAGCAAGTCTCATTAAGGCTTGGTTTAGGGAACTTCCTAGTGGCGTTTTGGATTCACTTTCACCAGAGCAAGTAATGGAGTCTGAGAGTGAAGATGAGTGTGTGGAGCTTGTAAGGCTTCTTCCTTCAACAGAAGCTTCTTTGTTAGATTGGGCTATCAATCTAATGGCTGATGTTGTTGAGATGGAACAACTTAACAAGATGAATGCTCGAAACATTGCAATGGTTTTTGCACCTAACATGACTCAGATGTTGGATCCATTGACGGCTCTAATGTATGCTGTGCAAGTTATGAACTTTCTGAAAACACTTATTGTGAAGACGCTTAAAGACCGAAAAGAATCTAGAGATAAGTTGGTTCCAGCCTCAAATCCAAGTCCTCGGGACCATAATGGTGATCAGAGCAGCAGTAGACAGTTGTTACATCTCATGAAAGCTAACAAGGAGGAAACTTTAGACAACTTTGAGGCGGAGATGAAAGACAAAGAAGAGTCTGCAGATGAAGAAGAAGAAGAATGTGCCGAATCTGTAGAACTTGTTGACATAAAAAAGTCTTCTCTGGTTAATAACAGCAGTGGAGGTTTTGGACAGAAACACATTGGTTGGGAGGAGCAGAGAACCATGTCGAAAGCGAGTAGTATTGTGGGACGTGTGAATTACAGAGTTGAGCTATTCGAAGCTTGGCGATGAAAAAAGGTTACTGTTGATGTTTTTGATCCAGCTTTTGGATTTCTTAATTTGGGTTTTGTGGGATGGATGGATGCTTTTGAATTTTGATGATGGTTGCTTGTGTATCAAGAAATGCTACGTTTCTGCATATAATGTCAATGATAAGTTTCTCAGTTTCTCTTTCTCTTCACAAGGATTTATCTTCATACTTGAAAGCAGTATCTGCAACTTTTGCAGGAAATAAATCATTTACCAAATTTACCATAATATATTACAGTCA
CDS Sequence
- >AT3G11490.1
ATGGCTAAAGTTCTAAAATCGAGCCAATCATGTCATTTCCCTTCACCTTCAAGCTCTTCTTCTACATCATGTGGAGGAGGCAATGATGGTAGTAATAGAGACCCACATTCTCCTTTTAACATTTCTCGTCGTGAGGAAGAGGAAGAAGAGGAAGAGAGAAGCGAGAAAGAGAGAGAAAGATTCGAGCTTTCATCTGCATTGGAGATTCTTGTTTCTGCTATTAGAAGGTCTGTGATTGGTGGGTGTGTTGGTGAAGAGGATCTTTGTTCAATGGAGATTGGTGTTCCTACAGATGTTAGACATGTCGCTCATGTTACCTTTGATCGTTTCCATGGCTTCCTTGGCTTGCCTGTTGAGTTTGAACCTGAAGTCCCTAGACGAGCTCCTAGTGCAAGTGCAACCGTGTTTGGAGTCTCTACTGAATCAATGCAGCTATCTTATGATACTAGAGGGAACATCGTGCCTACGATACTTTTGATGATGCAGAGTCACTTGTACAGTAGAGGCGGATTGCGGGTAGAGGGAATTTTCAGGATTAATGGTGAGAATGGTCAAGAAGAGTACATAAGAGAAGAGTTGAATAAAGGTATTATACCTGATAACATTGATGTCCACTGCTTAGCAAGTCTCATTAAGGCTTGGTTTAGGGAACTTCCTAGTGGCGTTTTGGATTCACTTTCACCAGAGCAAGTAATGGAGTCTGAGAGTGAAGATGAGTGTGTGGAGCTTGTAAGGCTTCTTCCTTCAACAGAAGCTTCTTTGTTAGATTGGGCTATCAATCTAATGGCTGATGTTGTTGAGATGGAACAACTTAACAAGATGAATGCTCGAAACATTGCAATGGTTTTTGCACCTAACATGACTCAGATGTTGGATCCATTGACGGCTCTAATGTATGCTGTGCAAGTTATGAACTTTCTGAAAACACTTATTGTGAAGACGCTTAAAGACCGAAAAGAATCTAGAGATAAGTTGGTTCCAGCCTCAAATCCAAGTCCTCGGGACCATAATGGTGATCAGAGCAGCAGTAGACAGTTGTTACATCTCATGAAAGCTAACAAGGAGGAAACTTTAGACAACTTTGAGGCGGAGATGAAAGACAAAGAAGAGTCTGCAGATGAAGAAGAAGAAGAATGTGCCGAATCTGTAGAACTTGTTGACATAAAAAAGTCTTCTCTGGTTAATAACAGCAGTGGAGGTTTTGGACAGAAACACATTGGTTGGGAGGAGCAGAGAACCATGTCGAAAGCGAGTAGTATTGTGGGACGTGTGAATTACAGAGTTGAGCTATTCGAAGCTTGGCGATGA
Protein Sequence
- >AT3G11490.1
MAKVLKSSQSCHFPSPSSSSSTSCGGGNDGSNRDPHSPFNISRREEEEEEEERSEKERERFELSSALEILVSAIRRSVIGGCVGEEDLCSMEIGVPTDVRHVAHVTFDRFHGFLGLPVEFEPEVPRRAPSASATVFGVSTESMQLSYDTRGNIVPTILLMMQSHLYSRGGLRVEGIFRINGENGQEEYIREELNKGIIPDNIDVHCLASLIKAWFRELPSGVLDSLSPEQVMESESEDECVELVRLLPSTEASLLDWAINLMADVVEMEQLNKMNARNIAMVFAPNMTQMLDPLTALMYAVQVMNFLKTLIVKTLKDRKESRDKLVPASNPSPRDHNGDQSSSRQLLHLMKANKEETLDNFEAEMKDKEESADEEEEECAESVELVDIKKSSLVNNSSGGFGQKHIGWEEQRTMSKASSIVGRVNYRVELFEAWR