Information report for AT3G11400
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Plant initiation factor 3 subunit composition resembles mammalian initiation factor 3 and has a novel subunit. DOI: 10.1074/jbc.M007236200 ; PMID: 11042177
- An expressed sequence tag (EST) library from developing fruits of an Hawaiian endemic mint (Stenogyne rugosa, Lamiaceae): characterization and microsatellite markers. DOI: 10.1186/1471-2229-6-16 ; PMID: 16928278
- Transcriptome analysis of proliferating Arabidopsis endosperm reveals biological implications for the control of syncytial division, cytokinin signaling, and gene expression regulation. DOI: 10.1104/pp.108.128108 ; PMID: 18923020
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- A conserved motif in three viral movement proteins from different genera is required for host factor recruitment and cell-to-cell movement. DOI: 10.1038/s41598-020-61741-5 ; PMID: 32179855
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Gene Resources
- UniProt: Q9SSJ0
- EMBL: AC008153, AF428308, AJ293728
- AlphaFoldDB: Q9SSJ0
- EnsemblPlants: AT3G11400.1
- Gramene: AT3G11400.1
- Orthologous matrix: ICQGDHF
- ExpressionAtlas: AT3G11400
Homologs
- Citrullus lanatus Cla97C09G177400
- Cucumis melo MELO3C018644
- Juglans regia Jr08_06090, Jr08_06080
- Oryza sativa LOC_Os08g37960
- Saccharum spontaneum Sspon.06G0000480-1A
- Setaria italica SETIT_014087mg
- Setaria viridis SEVIR_6G196900v2
- Solanum lycopersicum Solyc08g074860.1.1
- Solanum tuberosum PGSC0003DMP400027535
- Vitis vinifera VIT_213s0106g00343
Sequences
cDNA Sequence
- >AT3G11400.1
AAAAGCCCAAAAAACATAAGAGAGTCTAAATTAATTCCTAGAAGAGGGTAAGAGGCTTAGTGGAGCGGGCCTGGACACAGCTTTTTGTAGATATTAGAATTTTAAAAATTGAATTTCTTCACATTAAAATTGCTACTGGACCAAGTAAAATTCTGAAGGAATCAAAACGGTGCGTTCCGGTTACGGAGCACACACAGATAAGATAGGAAACCCTAAAAGTGCTTCTTCTTCTTCGTCTTCTTCTTCAGTTTTAGGTTACGATCGAAGCAAAAGCGGCGCATCTGAATCCCAAACGAGTGACGATGACGATCGATTCGCAGCAAAAAACGAGCAAATTCAGATGGGGGGAAATGGACGAAGACGAAGATCTGGATTTCTTGCTCCCTCCCAAGCAGGTGATTGGTCCAGATGAGAATGGTTTGAAGACGACGATCGAGTACAAATTCAACGATGAAGAAAATAAGGTTAAGATAACGACTAGGACACGTGTCCGCAAGCTAGCTTCTGCTCGACTCAACAAACGAGCCATGGAGAGGAGGAACTGGCCTAAGTTCGGAGACGCAGCCAATGAGGAAGCTGGTAGCCATCTCACTATGGTTTCTACCGAAGAGATCCTTCTCGAACGACCCCGAGCTCCTGGTACCAAAGCGGATGAATCAAAGGCAACAGGAGATGGCTTGTCTCAGCTGGGTAAAGGTGGTGCAGTTCTCATGGTGTGCAGGATATGCCACAAGAAAGGAGATCACTGGACATCAAAATGTCCATACAAGGATCTAGCTGCACCAACCGATGTCTTCATTGACAAGCCACCCACAGGGGAATCATCTACCATGTCTGCTGCACCTGGAACTGGCAAGGCCGCGTATGTCCCGCCTAGCATGAGAGCAGGTGCAGACAGAAGCGCTGTGGGTTCAGACATGAGGAGGAGGAACGATGAGAACTCTGTGCGTGTAACCAATCTGTCCGAGGATACCCGTGAACCTGACTTGATGGAGCTGTTCCACCCGTTTGGAGCTGTCACACGTGTCTATGTGGCCATTGATCAGAAAACTGGAGTGAGCAGAGGATTTGGTTTCGTCAATTTCGTGAGCAGAGAAGACGCTCAAAGAGCAATCAACAAATTGAATGGTTATGGTTATGATAACCTCATCCTCAGGGTTGAATGGGCAACTCCAAGACCAACCTAGAAAGAAATGTCTGATGTTGAGACCTTAAAACTCTTCTCATTCTCGTCTTTCTTGTTATGGATTTTTGTTTATCGACCAGTTTGTTTGTTGGTTTGGTTTCTGTATGAATAGATGAGAATTTGTTCAATTTCTCTTTAATACATAAGGCATGCTTTTTAAAAAATGGATTTGTGTGATACGTAAGAGTTTTCCAACACTTTTTT - >AT3G11400.2
AAAAGCCCAAAAAACATAAGAGAGTCTAAATTAATTCCTAGAAGAGGGTAAGAGGCTTAGTGGAGCGGGCCTGGACACAGCTTTTTGTAGATATTAGAATTTTAAAAATTGAATTTCTTCACATTAAAATTGCTACTGGACCAAGTAAAATTCTGAAGGAATCAAAACGGTGCGTTCCGGTTACGGAGCACACACAGATAAGATAGGAAACCCTAAAAGTGCTTCTTCTTCTTCGTCTTCTTCTTCAGTTTTAGGTTACGATCGAAGCAAAAGCGGCGCATCTGAATCCCAAACGAGTGACGATGACGATCGATTCGCAGCAAAAAACGAGCAAATTCAGATGGGGGGAAATGGACGAAGACGAAGATCTGGATTTCTTGCTCCCTCCCAAGCAGGTGATTGGTCCAGATGAGAATGGTTTGAAGACGACGATCGAGTACAAATTCAACGATGAAGAAAATAAGGTTAAGATAACGACTAGGACACGTGTCCGCAAGCTAGCTTCTGCTCGACTCAACAAACGAGCCATGGAGAGGAGGAACTGGCCTAAGTTCGGAGACGCAGCCAATGAGGAAGCTGGTAGCCATCTCACTATGGTTTCTACCGAAGAGATCCTTCTCGAACGACCCCGAGCTCCTGGTACCAAAGCGGATGAATCAAAGGCAACAGGAGATGGCTTGTCTCAGCTGGGTAAAGGTGGTGCAGTTCTCATGGTGTGCAGGATATGCCACAAGAAAGGAGATCACTGGACATCAAAATGTCCATACAAGGATCTAGCTGCACCAACCGATGTCTTCATTGACAAGCCACCCACAGGGGAATCATCTACCATGTCTGCTGCACCTGGAACTGGCAAGGCCGCGTATGTCCCGCCTAGCATGAGAGCAGGTGCAGACAGAAGCGCTGTGGGTTCAGACATGAGGAGGAGGAACGATGAGAACTCTGTGCGTGTAACCAATCTGTCCGAGGATACCCGTGAACCTGACTTGATGGAGCTGTTCCACCCGTTTGGAGCTGTCACACGTGTCTATGTGGCCATTGATCAGAAAACTGGAGTGAGCAGAGGATTTGGTTTCGTCAATTTCGTGAGCAGAGAAGACGCTCAAAGAGCAATCAACAAATTGAATGGTTATGGTTATGATAACCTCATCCTCAGGGTTGAATGGGCAACTCCAAGACCAACCTAGAAAGAAATGTCTGATGTTGAGACCTTAAAACTCTTCTCATTCTCGTCTTTCTTGTTATGGATTTTTGTTTATCGACCAGTTTGTTTGTTGGTTTGGTTTCTGTATGAATAGATGAGAATTTGTTCAATTTCTCTTTAATACATAAGGCATGCTTTTTAAAAAATGGATTTGTGTGATACGTAAGAGTTTTCCAACACTTTTTT
CDS Sequence
- >AT3G11400.1
ATGACGATCGATTCGCAGCAAAAAACGAGCAAATTCAGATGGGGGGAAATGGACGAAGACGAAGATCTGGATTTCTTGCTCCCTCCCAAGCAGGTGATTGGTCCAGATGAGAATGGTTTGAAGACGACGATCGAGTACAAATTCAACGATGAAGAAAATAAGGTTAAGATAACGACTAGGACACGTGTCCGCAAGCTAGCTTCTGCTCGACTCAACAAACGAGCCATGGAGAGGAGGAACTGGCCTAAGTTCGGAGACGCAGCCAATGAGGAAGCTGGTAGCCATCTCACTATGGTTTCTACCGAAGAGATCCTTCTCGAACGACCCCGAGCTCCTGGTACCAAAGCGGATGAATCAAAGGCAACAGGAGATGGCTTGTCTCAGCTGGGTAAAGGTGGTGCAGTTCTCATGGTGTGCAGGATATGCCACAAGAAAGGAGATCACTGGACATCAAAATGTCCATACAAGGATCTAGCTGCACCAACCGATGTCTTCATTGACAAGCCACCCACAGGGGAATCATCTACCATGTCTGCTGCACCTGGAACTGGCAAGGCCGCGTATGTCCCGCCTAGCATGAGAGCAGGTGCAGACAGAAGCGCTGTGGGTTCAGACATGAGGAGGAGGAACGATGAGAACTCTGTGCGTGTAACCAATCTGTCCGAGGATACCCGTGAACCTGACTTGATGGAGCTGTTCCACCCGTTTGGAGCTGTCACACGTGTCTATGTGGCCATTGATCAGAAAACTGGAGTGAGCAGAGGATTTGGTTTCGTCAATTTCGTGAGCAGAGAAGACGCTCAAAGAGCAATCAACAAATTGAATGGTTATGGTTATGATAACCTCATCCTCAGGGTTGAATGGGCAACTCCAAGACCAACCTAG - >AT3G11400.2
ATGACGATCGATTCGCAGCAAAAAACGAGCAAATTCAGATGGGGGGAAATGGACGAAGACGAAGATCTGGATTTCTTGCTCCCTCCCAAGCAGGTGATTGGTCCAGATGAGAATGGTTTGAAGACGACGATCGAGTACAAATTCAACGATGAAGAAAATAAGGTTAAGATAACGACTAGGACACGTGTCCGCAAGCTAGCTTCTGCTCGACTCAACAAACGAGCCATGGAGAGGAGGAACTGGCCTAAGTTCGGAGACGCAGCCAATGAGGAAGCTGGTAGCCATCTCACTATGGTTTCTACCGAAGAGATCCTTCTCGAACGACCCCGAGCTCCTGGTACCAAAGCGGATGAATCAAAGGCAACAGGAGATGGCTTGTCTCAGCTGGGTAAAGGTGGTGCAGTTCTCATGGTGTGCAGGATATGCCACAAGAAAGGAGATCACTGGACATCAAAATGTCCATACAAGGATCTAGCTGCACCAACCGATGTCTTCATTGACAAGCCACCCACAGGGGAATCATCTACCATGTCTGCTGCACCTGGAACTGGCAAGGCCGCGTATGTCCCGCCTAGCATGAGAGCAGGTGCAGACAGAAGCGCTGTGGGTTCAGACATGAGGAGGAGGAACGATGAGAACTCTGTGCGTGTAACCAATCTGTCCGAGGATACCCGTGAACCTGACTTGATGGAGCTGTTCCACCCGTTTGGAGCTGTCACACGTGTCTATGTGGCCATTGATCAGAAAACTGGAGTGAGCAGAGGATTTGGTTTCGTCAATTTCGTGAGCAGAGAAGACGCTCAAAGAGCAATCAACAAATTGAATGGTTATGGTTATGATAACCTCATCCTCAGGGTTGAATGGGCAACTCCAAGACCAACCTAG
Protein Sequence
- >AT3G11400.1
MTIDSQQKTSKFRWGEMDEDEDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAPTDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT - >AT3G11400.2
MTIDSQQKTSKFRWGEMDEDEDLDFLLPPKQVIGPDENGLKTTIEYKFNDEENKVKITTRTRVRKLASARLNKRAMERRNWPKFGDAANEEAGSHLTMVSTEEILLERPRAPGTKADESKATGDGLSQLGKGGAVLMVCRICHKKGDHWTSKCPYKDLAAPTDVFIDKPPTGESSTMSAAPGTGKAAYVPPSMRAGADRSAVGSDMRRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRPT