Gene Details:
- Gene ID: AT3G11330
- Gene Symbol: PIRL9
- Gene Name: plant intracellular ras group-related LRR 9
- Description: plant intracellular ras group-related LRR 9;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- pirl1-2 pirl9-2 — microspore lethal
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- PIRLs: a novel class of plant intracellular leucine-rich repeat proteins. DOI: 10.1093/pcp/pci097 ; PMID: 15809230
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- The Arabidopsis Plant Intracellular Ras-group LRR (PIRL) Family and the Value of Reverse Genetic Analysis for Identifying Genes that Function in Gametophyte Development. DOI: 10.3390/plants2030507 ; PMID: 27137390
- Expression analysis of plant intracellular Ras-group related leucine-rich repeat proteins (PIRLs) in Arabidopsis thaliana. DOI: 10.1016/j.bbrep.2022.101241 ; PMID: 35280522
Sequences:
cDNA Sequence
- >AT3G11330.1
CTTACACGTGTCAACTTGACATCAGAGAAAACGCAGAGAAGGCGAACACTAACAGAGAACGTGGAGAGACGCAACAAAGCCTGGATCAATCATCATCTTCATCAATTTCCAGATTCAGATTCCAAATCTCCGAAGCTTAACGAAAACAATGGCGGCAGAACCTAACCCTAAGAATTTCCCTGTCCTCTCTTATGTCTTGGCTCGTCTCCCTTCTTTCACCGCCAAATCCCCTTCCTCCTCCGTTCCTCCCTTCGACATCGAACAACCACCACCATCATCATCATCATCATCGATTGAGATCGTCACTCAGATGCCTCACTTAACACAACCAGATGTTCTCGCTTCAATGACAAGTGCGATCTCTGACGTCGCCGAGACTCGATCTATCCTTCGAACCCTAGGACCTAGACCAGATCACGAATCAGTCGATAAGGCTCGTGCTAAACTCTCGGAAATCGAATCGTTCTTATCTGAATCGTTCGAGGATATCGCGTTAACCGATGCGGCGGCGAAAGATGAGAAGAGGAGACAAGAGATGGATCAGGAGAAGACTTGGTGTGAGTCGATTTTGAAGCTTGATGAGGTTCATGCTTCGTATGAGAAGCTTTTGAAAGAAGCAGAGGAGAGGCTTGTTAGGATTTATGAATCTGCTGAGAAGAATGCGGCGGAGGATGAGGAGAATGTTGCGGCTGTGGAGGTTAATGAGGAGGTTGTTGGGATATTGCAGCATGCTTCTGCTAATCCGGTGGATCGTGTTGATTTGTCTGGGAGGAAACTGAGGTTGCTACCTGAAGCTTTTGGGAGGATTCAAGGGTTGCTTGTTCTTAATCTCTCCAACAATAAGCTTGAGTCGATTCCTGATTCAATTGCTGGATTGCATAGTCTTGTTGAACTGGATGTCTCCACGAATTCTCTGGAGACATTACCTGATTCCATCGGTTTACTGTCCAAACTAAAAATCCTGAATGTTTCGACTAACAAGCTCACATCCTTGCCTGACTCCATCTGCCGCTGTGGGTCGTTGGTTATCTTGGACGTGAGCTTCAACCGTCTCACCTACTTACCGACCAACATCGGTCCTGAGCTAGTGAATCTAGAAAAGCTCCTGGTTCAGTATAACAAGATCCGATCCTTCCCGACCAGTATAGGCGAAATGAGATCCCTAAAACACCTCGACGCCCACTTCAACGAACTTAACGGCCTTCCTGATTCTTTCGTGTTGCTCACAAATCTCGAGTACTTAAACCTAAGCAGCAACTTCAGTGATCTCAAGGATCTCCCATTCTCATTCGGCGAACTCATAAGCCTCCAAGAACTCGACTTGAGTAACAACCAAATCCATGCCCTCCCTGACACTTTTGGCACACTTGATAGCCTGACCAAACTGAATGTGGATCAGAACCCGCTCGTCGTCCCACCCGAGGAAGTGGTGAAGGAAGGTGTTGAAGCTGTGAAGACGTACATGGGTCAGAGAAGGATCAGTATGTTGGAAGAAGAAGAGAAGAAGAAAATGGAGGAAGAGATGGAGCAGGCAAACGCCGGGTGGCTCACACGAACCACATCGAAGCTGAAAACATATGTCGCAGATGTTTCAGAGTATCTCGGATCAAATTCTCCTCGAGACCCTTACCTTGAACGACAGCTATGATGTGACTTGGCTTGAAGAACAATGAATCCAAAGAGGTTGAAATTTCTCGTTTTGGCTGGTTCTGTCTCAGTTTTTTCTCCTATCATTCGGTATATAACGAAGGGGCTCTCTTCGTTACTGTGTTGTCTGGTGTTATTCTTTCTGACGGGTAAGGCCTGTCATTAACTTAGGTTCAATTCAAACTTAAAAGACTCTCACGGGGTCCAACTAATAAGAGAAAACACTTAGTTATTTGTTTAACCTCAATTCTTCTTGGATTTTACTGGGTGTGGTTTTGGACTTTACCTATTTTTGGTTTCCTTAGTGTAGGAATCTTACATGATAACTATAAGCGAAAAGAACATGATTGTTTCACGACTTTATGGTTATTCGAAGAATCACTTACTATATACTTATTTTAGTAAAAAACAAATGTTGATCATTAAATCTCAAATTACGCCGCCAGGCTCCGGAAGCAATATATTTTAGATCCTTGGTTTATGCAGATCTTCTTTTGGTTCCACACTTATCAACCAATTGCATATGCTTCTCTTTGGAAACAACGTAGTCTTTATCATCACACTGATTGCTT
CDS Sequence
- >AT3G11330.1
ATGGCGGCAGAACCTAACCCTAAGAATTTCCCTGTCCTCTCTTATGTCTTGGCTCGTCTCCCTTCTTTCACCGCCAAATCCCCTTCCTCCTCCGTTCCTCCCTTCGACATCGAACAACCACCACCATCATCATCATCATCATCGATTGAGATCGTCACTCAGATGCCTCACTTAACACAACCAGATGTTCTCGCTTCAATGACAAGTGCGATCTCTGACGTCGCCGAGACTCGATCTATCCTTCGAACCCTAGGACCTAGACCAGATCACGAATCAGTCGATAAGGCTCGTGCTAAACTCTCGGAAATCGAATCGTTCTTATCTGAATCGTTCGAGGATATCGCGTTAACCGATGCGGCGGCGAAAGATGAGAAGAGGAGACAAGAGATGGATCAGGAGAAGACTTGGTGTGAGTCGATTTTGAAGCTTGATGAGGTTCATGCTTCGTATGAGAAGCTTTTGAAAGAAGCAGAGGAGAGGCTTGTTAGGATTTATGAATCTGCTGAGAAGAATGCGGCGGAGGATGAGGAGAATGTTGCGGCTGTGGAGGTTAATGAGGAGGTTGTTGGGATATTGCAGCATGCTTCTGCTAATCCGGTGGATCGTGTTGATTTGTCTGGGAGGAAACTGAGGTTGCTACCTGAAGCTTTTGGGAGGATTCAAGGGTTGCTTGTTCTTAATCTCTCCAACAATAAGCTTGAGTCGATTCCTGATTCAATTGCTGGATTGCATAGTCTTGTTGAACTGGATGTCTCCACGAATTCTCTGGAGACATTACCTGATTCCATCGGTTTACTGTCCAAACTAAAAATCCTGAATGTTTCGACTAACAAGCTCACATCCTTGCCTGACTCCATCTGCCGCTGTGGGTCGTTGGTTATCTTGGACGTGAGCTTCAACCGTCTCACCTACTTACCGACCAACATCGGTCCTGAGCTAGTGAATCTAGAAAAGCTCCTGGTTCAGTATAACAAGATCCGATCCTTCCCGACCAGTATAGGCGAAATGAGATCCCTAAAACACCTCGACGCCCACTTCAACGAACTTAACGGCCTTCCTGATTCTTTCGTGTTGCTCACAAATCTCGAGTACTTAAACCTAAGCAGCAACTTCAGTGATCTCAAGGATCTCCCATTCTCATTCGGCGAACTCATAAGCCTCCAAGAACTCGACTTGAGTAACAACCAAATCCATGCCCTCCCTGACACTTTTGGCACACTTGATAGCCTGACCAAACTGAATGTGGATCAGAACCCGCTCGTCGTCCCACCCGAGGAAGTGGTGAAGGAAGGTGTTGAAGCTGTGAAGACGTACATGGGTCAGAGAAGGATCAGTATGTTGGAAGAAGAAGAGAAGAAGAAAATGGAGGAAGAGATGGAGCAGGCAAACGCCGGGTGGCTCACACGAACCACATCGAAGCTGAAAACATATGTCGCAGATGTTTCAGAGTATCTCGGATCAAATTCTCCTCGAGACCCTTACCTTGAACGACAGCTATGA
Protein Sequence
- >AT3G11330.1
MAAEPNPKNFPVLSYVLARLPSFTAKSPSSSVPPFDIEQPPPSSSSSSIEIVTQMPHLTQPDVLASMTSAISDVAETRSILRTLGPRPDHESVDKARAKLSEIESFLSESFEDIALTDAAAKDEKRRQEMDQEKTWCESILKLDEVHASYEKLLKEAEERLVRIYESAEKNAAEDEENVAAVEVNEEVVGILQHASANPVDRVDLSGRKLRLLPEAFGRIQGLLVLNLSNNKLESIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPPEEVVKEGVEAVKTYMGQRRISMLEEEEKKKMEEEMEQANAGWLTRTTSKLKTYVADVSEYLGSNSPRDPYLERQL