Information report for AT3G11200
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
- Structural Analysis of the Arabidopsis AL2-PAL and PRC1 Complex Provides Mechanistic Insight into Active-to-Repressive Chromatin State Switch. DOI: 10.1016/j.jmb.2018.08.021 ; PMID: 30176245
- Family-Wide Characterization of Histone Binding Abilities of PHD Domains of AL Proteins in Arabidopsis thaliana. DOI: 10.1007/s10930-018-9796-4 ; PMID: 30259302
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
- Arabidopsis ING and Alfin1-like protein families localize to the nucleus and bind to H3K4me3/2 via plant homeodomain fingers. DOI: 10.1111/j.1365-313X.2009.03795.x ; PMID: 19154204
Gene Resources
- UniProt: F4J673
- EMBL: CP002686
- AlphaFoldDB: F4J673
- EnsemblPlants: AT3G11200.2
- Gramene: AT3G11200.2
- ExpressionAtlas: AT3G11200
- InterPro: IPR001965, IPR011011, IPR013083
- PANTHER: PTHR12321, PTHR12321:SF122
- SUPFAM: SSF57903
- PROSITE: PS01359, PS50016
- Gene3D: 3.30.40.10
- OrthoDB: F4J673
- SWISS-MODEL: F4J673
- Conserved Domain Database: cd15613
Homologs
- Actinidia chinensis Achn036321, Achn050401, Achn055461
- Capsicum annuum CA03g35500
- Daucus carota DCAR_028852
- Malus domestica MDP0000241055, MDP0000311595
- Oryza sativa OsAL7.1, OsAL11
Sequences
cDNA Sequence
- >AT3G11200.2
CTCCATCTCCTTCCATATCTATTGTTCTCTCTCTCTTCATGCCCGAACGCATCGGGTCTCAAAAACCATTGATACAGACATCGATCCTTGTCAACTAGTACTGATCTATAAATCTTATAAAAATCTGTAGAGATATGGCCGCCGCAGCCGTTTCCTCTAACCCTCGCACCGTTGAAGAGATCTTCAAAGATTATTCCGCTCGTCGTGCCGCTCTTCTTCGTGCTCTCACTAAAGGTCTAAATCCTCTCTCTCTCTCTTTCTCTAAATTTCCCAGATTTCTTCGTAATGCCTTTGGATTCGTCCTTTAACTTGTTCGTTTTTGTGATTTTTTCCAGATGTTGATGATTTTTACTCTCAATGCGATCCGGGTATGAAAGATTTCGACTTTTAGATACCCTTTTATGTGTTTTATTGAGATTTGATTTCAATTTTTGGGTGTTTGTGGTTATAGAAAAGGAGAATTTGTGTTTGTACGGACACCCTAATGAGTCATGGGAAGTGAATCTACCAGCAGAGGAAGTGCCTCCGGAGCTACCTGAGCCTGCTCTTGGTATCAATTTCGCTAGAGATGGTATGCAGAGGAAAGATTGGCTTTCTCTTGTTGCTGTTCACAGTGATTGTTGGTTGCTCTCTGTTTCTTTCTACTTTGGAGCCCGTCTTAATCGCAATGAGAGGAAGCGGTTATTCAGTCTGATCAACGATCTCCCAACTCTCTTCGATGTAGTGACTGGTAGGAAAGCCATGAAAGACAACAAGCCAAGCTCGGACTCAGGAAGCAAATCCAGAAATGGCACTAAGAGATCAATAGACGGGCAGACAAAGAGCTCAACACCGAAACTAATGGAAGAGAGCTATGAGGAGGAGGAAGAAGAAGACGAGCATGGAGACACTCTCTGTGGAAGCTGTGGAGGTCATTACACAAATGAGGAGTTCTGGATTTGCTGTGATGTTTGTGAACGTTGGTACCATGGAAAATGCGTCAAGATAACTCCGGCTAAAGCAGAGAGCATCAAGCAGTATAAATGCCCGCCTTGCTGTGCAAAGAAAGGAAGACAGTGATGCTGATCAATTGATGATGATGATGATGATGATCTCTCAGAGAGACTCTGGTTCTCATGTTTTAATCAATATGTTAATCAACTTTTTTTCTTTTCTTCTCTTTTTTTCTTTAACCTTCTTAATTTTAAAGCATACAAAACTCTCTCTTTAGATCTCAAGAAAGGGATTTCAAGAAGTTGAGGGAGAGAGTAGCAAACTGTTTGAATAATATTATTATTATTCATATTAAAAAAAAAAAAACTGGGTTGTGTCATCAATTGTGTTGTGTCATGGGGTTTGTATATGTTAGACTTAGTCAAATCTTTAAGCTTCGAACCGAATTTTGAACAAATATGTTTTTAATCT - >AT3G11200.1
CTCCATCTCCTTCCATATCTATTGTTCTCTCTCTCTTCATGCCCGAACGCATCGGGTCTCAAAAACCATTGATACAGACATCGATCCTTGTCAACTAGTACTGATCTATAAATCTTATAAAAATCTGTAGAGATATGGCCGCCGCAGCCGTTTCCTCTAACCCTCGCACCGTTGAAGAGATCTTCAAAGATTATTCCGCTCGTCGTGCCGCTCTTCTTCGTGCTCTCACTAAAGGTCTAAATCCTCTCTCTCTCTCTTTCTCTAAATTTCCCAGATTTCTTCGTAATGCCTTTGGATTCGTCCTTTAACTTGTTCGTTTTTGTGATTTTTTCCAGATGTTGATGATTTTTACTCTCAATGCGATCCGGGTATGAAAGATTTCGACTTTTAGATACCCTTTTATGTGTTTTATTGAGATTTGATTTCAATTTTTGGGTGTTTGTGGTTATAGAAAAGGAGAATTTGTGTTTGTACGGACACCCTAATGAGTCATGGGAAGTGAATCTACCAGCAGAGGAAGTGCCTCCGGAGCTACCTGAGCCTGCTCTTGGTATCAATTTCGCTAGAGATGGTATGCAGAGGAAAGATTGGCTTTCTCTTGTTGCTGTTCACAGTGATTGTTGGTTGCTCTCTGTTTCTTTCTACTTTGGAGCCCGTCTTAATCGCAATGAGAGGAAGCGGTTATTCAGTCTGATCAACGATCTCCCAACTCTCTTCGATGTAGTGACTGGTAGGAAAGCCATGAAAGACAACAAGCCAAGCTCGGACTCAGGAAGCAAATCCAGAAATGGCACTAAGAGATCAATAGACGGGCAGACAAAGAGCTCAACACCGAAACTAATGGAAGAGAGCTATGAGGAGGAGGAAGAAGAAGACGAGCATGGAGACACTCTCTGTGGAAGCTGTGGAGGTCATTACACAAATGAGGAGTTCTGGATTTGCTGTGATGTTTGTGAACGTTGGTACCATGGAAAATGCGTCAAGATAACTCCGGCTAAAGCAGAGAGCATCAAGCAGTATAAATGCCCGCCTTGCTGTGCAAAGAAAGGAAGACAGTGATGCTGATCAATTGATGATGATGATGATGATGATCTCTCAGAGAGACTCTGGTTCTCATGTTTTAATCAATATGTTAATCAACTTTTTTTCTTTTCTTCTCTTTTTTTCTTTAACCTTCTTAATTTTAAAGCATACAAAACTCTCTCTTTAGATCTCAAGAAAGGGATTTCAAGAAGTTGAGGGAGAGAGTAGCAAACTGTTTGAATAATATTATTATTATTCATATTAAAAAAAAAAAAACTGGGTTGTGTCATCAATTGTGTTGTGTCATGGGGTTTGTATATGTTAGACTTAGTCAAATCTTTAAGCTTCGAACCGAATTTTGAACAAATATGTTTTTAATCT
CDS Sequence
- >AT3G11200.2
ATGCGATCCGGGTATGAAAGATTTCGACTTTTAGATACCCTTTTATGTGTTTTATTGAGATTTGATTTCAATTTTTGGGTGTTTGTGGTTATAGAAAAGGAGAATTTGTGTTTGTACGGACACCCTAATGAGTCATGGGAAGTGAATCTACCAGCAGAGGAAGTGCCTCCGGAGCTACCTGAGCCTGCTCTTGGTATCAATTTCGCTAGAGATGGTATGCAGAGGAAAGATTGGCTTTCTCTTGTTGCTGTTCACAGTGATTGTTGGTTGCTCTCTGTTTCTTTCTACTTTGGAGCCCGTCTTAATCGCAATGAGAGGAAGCGGTTATTCAGTCTGATCAACGATCTCCCAACTCTCTTCGATGTAGTGACTGGTAGGAAAGCCATGAAAGACAACAAGCCAAGCTCGGACTCAGGAAGCAAATCCAGAAATGGCACTAAGAGATCAATAGACGGGCAGACAAAGAGCTCAACACCGAAACTAATGGAAGAGAGCTATGAGGAGGAGGAAGAAGAAGACGAGCATGGAGACACTCTCTGTGGAAGCTGTGGAGGTCATTACACAAATGAGGAGTTCTGGATTTGCTGTGATGTTTGTGAACGTTGGTACCATGGAAAATGCGTCAAGATAACTCCGGCTAAAGCAGAGAGCATCAAGCAGTATAAATGCCCGCCTTGCTGTGCAAAGAAAGGAAGACAGTGA - >AT3G11200.1
ATGCGATCCGGGTATGAAAGATTTCGACTTTTAGATACCCTTTTATGTGTTTTATTGAGATTTGATTTCAATTTTTGGGTGTTTGTGGTTATAGAAAAGGAGAATTTGTGTTTGTACGGACACCCTAATGAGTCATGGGAAGTGAATCTACCAGCAGAGGAAGTGCCTCCGGAGCTACCTGAGCCTGCTCTTGGTATCAATTTCGCTAGAGATGGTATGCAGAGGAAAGATTGGCTTTCTCTTGTTGCTGTTCACAGTGATTGTTGGTTGCTCTCTGTTTCTTTCTACTTTGGAGCCCGTCTTAATCGCAATGAGAGGAAGCGGTTATTCAGTCTGATCAACGATCTCCCAACTCTCTTCGATGTAGTGACTGGTAGGAAAGCCATGAAAGACAACAAGCCAAGCTCGGACTCAGGAAGCAAATCCAGAAATGGCACTAAGAGATCAATAGACGGGCAGACAAAGAGCTCAACACCGAAACTAATGGAAGAGAGCTATGAGGAGGAGGAAGAAGAAGACGAGCATGGAGACACTCTCTGTGGAAGCTGTGGAGGTCATTACACAAATGAGGAGTTCTGGATTTGCTGTGATGTTTGTGAACGTTGGTACCATGGAAAATGCGTCAAGATAACTCCGGCTAAAGCAGAGAGCATCAAGCAGTATAAATGCCCGCCTTGCTGTGCAAAGAAAGGAAGACAGTGA
Protein Sequence
- >AT3G11200.2
MRSGYERFRLLDTLLCVLLRFDFNFWVFVVIEKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGARLNRNERKRLFSLINDLPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTKRSIDGQTKSSTPKLMEESYEEEEEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPPCCAKKGRQ - >AT3G11200.1
MRSGYERFRLLDTLLCVLLRFDFNFWVFVVIEKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKDWLSLVAVHSDCWLLSVSFYFGARLNRNERKRLFSLINDLPTLFDVVTGRKAMKDNKPSSDSGSKSRNGTKRSIDGQTKSSTPKLMEESYEEEEEEDEHGDTLCGSCGGHYTNEEFWICCDVCERWYHGKCVKITPAKAESIKQYKCPPCCAKKGRQ