Information report for AT3G11170
Gene Details
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Functional Descriptions
- GO:0006636 — involved in — unsaturated fatty acid biosynthetic process
- GO:0009507 — located in — chloroplast
- GO:0006633 — acts upstream of or within — fatty acid biosynthetic process
- GO:0102839 — enables — 1-18:2-2-16:2-monogalactosyldiacylglycerol desaturase activity
- GO:0009409 — acts upstream of or within — response to cold
- GO:0102837 — enables — 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity
- GO:0042389 — enables — omega-3 fatty acid desaturase activity
- GO:0009941 — located in — chloroplast envelope
- GO:0102874 — enables — 1-16:0-2-18:2-digalactosyldiacylglycerol desaturase activity
- GO:0102875 — enables — 1-18:2-2-18:2-monogalactosyldiacylglycerol desaturase activity
- GO:0042170 — located in — plastid membrane
- GO:0102835 — enables — 1-18:2-2-16:0-monogalactosyldiacylglycerol desaturase activity
- GO:0102848 — enables — 1-18:2-2-18:2-digalactosyldiacylglycerol desaturase activity
- CS209 — altered fatty acid composition.
- CS3108 — altered fatty acid composition, glabrous, no other phenotypic effect.
- CS71655 — Altered fatty acid composition. Resistant to green peach aphids.
- CS8036 — reduction in desaturation of storage and membrane lipids; chilling sensitive; linoleic acid overproducer; linolenic acid underproducer.
- CS8042 — reduced glycerolipid n-3 desaturase (probably chloroplastic), chloroplast and extrachloroplast lipids are equally affected; decrease in 16:3 and 18:3 fatty acids, increase in 16:2 and 18:2 fatty acids; temperature sensitive, mutant effects most pronounced at growth temperatures greater that 26C; no visible phenotypic effects.
Functional Keywords
Literature and News
- Wounding and chemicals induce expression of the Arabidopsis thaliana gene Thi2.1, encoding a fungal defense thionin, via the octadecanoid pathway. DOI: 10.1016/s0014-5793(98)01251-4 ; PMID: 9824308
- A role for jasmonate in pathogen defense of Arabidopsis. DOI: 10.1073/pnas.95.12.7209 ; PMID: 9618564
- The impact of alteration of polyunsaturated fatty acid levels on C6-aldehyde formation of Arabidopsis thaliana leaves. DOI: 10.1104/pp.111.3.805 ; PMID: 8754681
- Cloning of a temperature-regulated gene encoding a chloroplast omega-3 desaturase from Arabidopsis thaliana. DOI: 10.1104/pp.106.4.1615 ; PMID: 7846164
- A gene encoding a chloroplast omega-3 fatty acid desaturase complements alterations in fatty acid desaturation and chloroplast copy number of the fad7 mutant of Arabidopsis thaliana. DOI: S0021-9258(20)80498-0 ; PMID: 8226956
- Plant defense in the absence of jasmonic acid: the role of cyclopentenones. DOI: 10.1073/pnas.211311098 ; PMID: 11592974
- Photoinhibition in mutants of Arabidopsis deficient in thylakoid unsaturation. DOI: 10.1104/pp.004341 ; PMID: 12068126
- Hormonal regulation of tissue-specific ectopic expression of an Arabidopsis endoplasmic reticulum-type omega-3 fatty acid desaturase (FAD3) gene. DOI: 10.1007/s004250100575 ; PMID: 11722119
- Plant growth-promoting rhizobacteria systemically protect Arabidopsis thaliana against Cucumber mosaic virus by a salicylic acid and NPR1-independent and jasmonic acid-dependent signaling pathway. DOI: 10.1111/j.1365-313X.2004.02142.x ; PMID: 15255867
- Temperature dependence of photosynthesis in Arabidopsis plants with modifications in Rubisco activase and membrane fluidity. DOI: 10.1093/pcp/pci052 ; PMID: 15695447
- Role of salicylic acid and fatty acid desaturation pathways in ssi2-mediated signaling. DOI: 10.1104/pp.105.071662 ; PMID: 16306139
- Enhanced cold tolerance in transgenic tobacco expressing a chloroplast omega-3 fatty acid desaturase gene under the control of a cold-inducible promoter. DOI: 10.1007/s00425-005-0161-4 ; PMID: 16292565
- Ozone-induced expression of the Arabidopsis FAD7 gene requires salicylic acid, but not NPR1 and SID2. DOI: 10.1093/pcp/pci253 ; PMID: 16415067
- Altered rates of protein transport in Arabidopsis mutants deficient in chloroplast membrane unsaturation. DOI: 10.1016/j.phytochem.2006.04.008 ; PMID: 16759675
- Genetic removal of tri-unsaturated fatty acids suppresses developmental and molecular phenotypes of an Arabidopsis tocopherol-deficient mutant. Whole-body mapping of malondialdehyde pools in a complex eukaryote. DOI: 10.1074/jbc.M706838200 ; PMID: 17928299
- Plastid omega3-fatty acid desaturase-dependent accumulation of a systemic acquired resistance inducing activity in petiole exudates of Arabidopsis thaliana is independent of jasmonic acid. DOI: 10.1111/j.1365-313X.2007.03400.x ; PMID: 18088304
- Tocopherols modulate extraplastidic polyunsaturated fatty acid metabolism in Arabidopsis at low temperature. DOI: 10.1105/tpc.107.054718 ; PMID: 18314499
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Nonenzymatic oxidation of trienoic fatty acids contributes to reactive oxygen species management in Arabidopsis. DOI: 10.1074/jbc.M807114200 ; PMID: 18996838
- Light-regulated Arabidopsis ACBP4 and ACBP5 encode cytosolic acyl-CoA-binding proteins that bind phosphatidylcholine and oleoyl-CoA ester. DOI: 10.1016/j.plaphy.2009.06.007 ; PMID: 19589686
- The power of mutants for investigating jasmonate biosynthesis and signaling. DOI: 10.1016/j.phytochem.2009.08.004 ; PMID: 19740496
- Expression of ACBP4 and ACBP5 proteins is modulated by light in Arabidopsis. DOI: 10.4161/psb.4.11.9718 ; PMID: 20009557
- The octadecanoid signaling pathway participates in the chilling-induced transcription of ω-3 fatty acid desaturases in Arabidopsis. DOI: 10.1016/j.plaphy.2010.11.013 ; PMID: 21185196
- and long-term thermotolerance have different requirements for trienoic fatty acids. DOI: 10.1093/jxb/err381 ; PMID: 22140238
- Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. DOI: 10.1111/j.1365-313X.2012.05021.x ; PMID: 22487254
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Plant lipidomics based on hydrophilic interaction chromatography coupled to ion trap time-of-flight mass spectrometry. DOI: 10.1007/s11306-011-0318-z ; PMID: 23463370
- FAD2 and FAD3 desaturases form heterodimers that facilitate metabolic channeling in vivo. DOI: 10.1074/jbc.M114.572883 ; PMID: 24811169
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Membranes as Structural Antioxidants: RECYCLING OF MALONDIALDEHYDE TO ITS SOURCE IN OXIDATION-SENSITIVE CHLOROPLAST FATTY ACIDS. DOI: 10.1074/jbc.M116.729921 ; PMID: 27143359
- The pht4;1-3 mutant line contains a loss of function allele in the Fatty Acid Desaturase 7 gene caused by a remnant inactivated selection marker-a cautionary tale. DOI: 10.7717/peerj.4134 ; PMID: 29209580
- A Role for Tocopherol Biosynthesis in Arabidopsis Basal Immunity to Bacterial Infection. DOI: 10.1104/pp.19.00618 ; PMID: 31515446
- Plant surface metabolites as potent antifungal agents. DOI: 10.1016/j.plaphy.2020.02.026 ; PMID: 32112998
- Ozone-induced lipid changes in the wildtype and toc132toc120 heterozygote mutant of Arabidopsis thaliana. DOI: 10.1016/j.plaphy.2020.11.050 ; PMID: 33291051
- Fatty Acid Desaturases in the Chloroplast and Endoplasmic Reticulum Promote Susceptibility to the Green Peach Aphid Myzus persicae in Arabidopsis thaliana. DOI: 10.1094/MPMI-12-20-0345-R ; PMID: 33596108
- A gene encoding a chloroplast omega-3 fatty acid desaturase complements alterations in fatty acid desaturation and chloroplast copy number of the fad7 mutant of Arabidopsis thaliana. DOI: S0021-9258(20)80498-0 ; PMID: 8226956
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A654F5Z9
- EMBL: CACRSJ010000106
- AlphaFoldDB: A0A654F5Z9
- EnsemblPlants: AT3G11170.1
- Gramene: AT3G11170.1
- KEGG: ath:AT3G11170
Homologs
- Daucus carota DCAR_032249
- Glycine max NA
- Gossypium hirsutum NA
Sequences
cDNA Sequence
- >AT3G11170.1
GTCATTTAAAAGTTAGTGTCATGAAACATATGCCTCATTATATTTTATTATTTTCGTTCACTTTATTTCAAAGGCTTTAAACTATATGACATCATAACCAAAACAAGAATTAAAACGAGATCAATCAAACCCGTGTTGAAACCTCAACTTGTGTCTAAATTGACCGTCACAAAAAAAAATCTCACATCACACCATCACTAATAAATTTCCTTCTCCTTTCAAGTTGTAGCTAACTTATATAAGACATAAGCGTGCGAACCAGAGACAGAGATAGAAATTGAGAGACGATAAGCAAAGTAGAAAACACAAGTTTCTCTCACACACATTATCTCTTTCTCTATTACCACCACTCATTCATAACAGAAACCCACCAAAAAATAAAAAGAGAGACTTTTCACTCTGGGGAGAGAGCTCAAGTTCTAATGGCGAACTTGGTCTTATCAGAATGTGGTATACGACCTCTCCCCAGAATCTACACAACACCCAGATCCAATTTCCTCTCCAACAACAACAAATTCAGACCATCACTTTCTTCTTCTTCTTACAAAACATCATCATCTCCTCTGTCTTTTGGTCTGAATTCACGAGATGGGTTCACGAGGAATTGGGCGTTGAATGTGAGCACACCATTAACGACACCAATATTTGAGGAGTCTCCATTGGAGGAAGATAATAAACAGAGATTCGATCCAGGTGCGCCTCCTCCGTTCAATTTAGCTGATATTAGAGCAGCTATACCTAAGCATTGTTGGGTTAAGAATCCATGGAAGTCTTTGAGTTATGTCGTCAGAGACGTCGCTATCGTCTTTGCATTGGCTGCTGGAGCTGCTTACCTCAACAATTGGATTGTTTGGCCTCTCTATTGGCTCGCTCAAGGAACCATGTTTTGGGCTCTCTTTGTTCTTGGTCATGACTGTGGACATGGTAGTTTCTCAAATGATCCGAAGTTGAACAGTGTGGTCGGTCATCTTCTTCATTCCTCAATTCTGGTCCCATACCATGGCTGGAGAATTAGTCACAGAACTCACCACCAGAACCATGGACATGTTGAGAATGACGAATCTTGGCATCCTATGTCTGAGAAAATCTACAATACTTTGGACAAGCCGACTAGATTCTTTAGATTTACACTGCCTCTCGTGATGCTTGCATACCCTTTCTACTTGTGGGCTCGAAGTCCGGGGAAAAAGGGTTCTCATTACCATCCAGACAGTGACTTGTTCCTCCCTAAAGAGAGAAAGGATGTCCTCACTTCTACTGCTTGTTGGACTGCAATGGCTGCTCTGCTTGTTTGTCTCAACTTCACAATCGGTCCAATTCAAATGCTCAAACTTTATGGAATTCCTTACTGGATAAATGTAATGTGGTTGGACTTTGTGACTTACCTGCATCACCATGGTCATGAAGATAAGCTTCCTTGGTACCGTGGCAAGGAGTGGAGTTACCTGAGAGGAGGACTTACAACATTGGATCGTGACTACGGATTGATCAATAACATCCATCATGATATTGGAACTCATGTGATACATCATCTTTTCCCGCAGATCCCACATTATCATCTAGTAGAAGCAACAGAAGCAGCTAAACCAGTATTAGGGAAGTATTACAGGGAGCCTGATAAGTCTGGACCGTTGCCATTACATTTACTGGAAATTCTAGCGAAAAGTATAAAAGAAGATCATTACGTGAGCGACGAAGGAGAAGTTGTATACTATAAAGCAGATCCAAATCTCTATGGAGAGGTCAAAGTAAGAGCAGATTGAAATGAAGCAGGCTTGAGATTGAAGTTTTTTCTATTTCAGACCAGCTGATTTTTTGCTTACTGTATCAATTTATTGTGTCACCCACCAGAGAGTTAGTATCTCTGAATACGATCGATCAGATGGAAACAACAAATTTGTTTGCGATACTGAAGCTATATATACCATACATTGCATTATCTTAGATACATTTAAATTCTAGCAAAAAGTATAAAAGAAGATCATTACGTGAGCGACGAAGGAGATGTTGTATATATACTACAAATTAAGCAGATCCAAATCTCTATGTTTCCGATACTGAAGCTTTATACTAATAAAATATACATTGC
CDS Sequence
- >AT3G11170.1
ATGGCGAACTTGGTCTTATCAGAATGTGGTATACGACCTCTCCCCAGAATCTACACAACACCCAGATCCAATTTCCTCTCCAACAACAACAAATTCAGACCATCACTTTCTTCTTCTTCTTACAAAACATCATCATCTCCTCTGTCTTTTGGTCTGAATTCACGAGATGGGTTCACGAGGAATTGGGCGTTGAATGTGAGCACACCATTAACGACACCAATATTTGAGGAGTCTCCATTGGAGGAAGATAATAAACAGAGATTCGATCCAGGTGCGCCTCCTCCGTTCAATTTAGCTGATATTAGAGCAGCTATACCTAAGCATTGTTGGGTTAAGAATCCATGGAAGTCTTTGAGTTATGTCGTCAGAGACGTCGCTATCGTCTTTGCATTGGCTGCTGGAGCTGCTTACCTCAACAATTGGATTGTTTGGCCTCTCTATTGGCTCGCTCAAGGAACCATGTTTTGGGCTCTCTTTGTTCTTGGTCATGACTGTGGACATGGTAGTTTCTCAAATGATCCGAAGTTGAACAGTGTGGTCGGTCATCTTCTTCATTCCTCAATTCTGGTCCCATACCATGGCTGGAGAATTAGTCACAGAACTCACCACCAGAACCATGGACATGTTGAGAATGACGAATCTTGGCATCCTATGTCTGAGAAAATCTACAATACTTTGGACAAGCCGACTAGATTCTTTAGATTTACACTGCCTCTCGTGATGCTTGCATACCCTTTCTACTTGTGGGCTCGAAGTCCGGGGAAAAAGGGTTCTCATTACCATCCAGACAGTGACTTGTTCCTCCCTAAAGAGAGAAAGGATGTCCTCACTTCTACTGCTTGTTGGACTGCAATGGCTGCTCTGCTTGTTTGTCTCAACTTCACAATCGGTCCAATTCAAATGCTCAAACTTTATGGAATTCCTTACTGGATAAATGTAATGTGGTTGGACTTTGTGACTTACCTGCATCACCATGGTCATGAAGATAAGCTTCCTTGGTACCGTGGCAAGGAGTGGAGTTACCTGAGAGGAGGACTTACAACATTGGATCGTGACTACGGATTGATCAATAACATCCATCATGATATTGGAACTCATGTGATACATCATCTTTTCCCGCAGATCCCACATTATCATCTAGTAGAAGCAACAGAAGCAGCTAAACCAGTATTAGGGAAGTATTACAGGGAGCCTGATAAGTCTGGACCGTTGCCATTACATTTACTGGAAATTCTAGCGAAAAGTATAAAAGAAGATCATTACGTGAGCGACGAAGGAGAAGTTGTATACTATAAAGCAGATCCAAATCTCTATGGAGAGGTCAAAGTAAGAGCAGATTGA
Protein Sequence
- >AT3G11170.1
MANLVLSECGIRPLPRIYTTPRSNFLSNNNKFRPSLSSSSYKTSSSPLSFGLNSRDGFTRNWALNVSTPLTTPIFEESPLEEDNKQRFDPGAPPPFNLADIRAAIPKHCWVKNPWKSLSYVVRDVAIVFALAAGAAYLNNWIVWPLYWLAQGTMFWALFVLGHDCGHGSFSNDPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPMSEKIYNTLDKPTRFFRFTLPLVMLAYPFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKLYGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSDEGEVVYYKADPNLYGEVKVRAD