Gene Details:

  • Gene ID: AT3G10920
  • Gene Symbol: ATMSD1, AtSOD1, MEE33, MSD1
  • Gene Name: ARABIDOPSIS MANGANESE SUPEROXIDE DISMUTASE 1, superoxide dismutase 1, MATERNAL EFFECT EMBRYO ARREST 33, manganese superoxide dismutase 1
  • Description: manganese superoxide dismutase 1;(source:Araport11)
  • TAIR Accession: locus:2085552
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
  • PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
  • PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
  • PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
  • PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
  • PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
  • PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
  • PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
  • PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
  • PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
  • PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
  • PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
  • PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
  • PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
  • PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
  • PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

  • GO:0019430  — acts upstream of or within — removal of superoxide radicals
  • GO:0009793  — acts upstream of or within — embryo development ending in seed dormancy
  • GO:0030145  — enables — manganese ion binding
  • GO:0005739  — located in — mitochondrion
  • GO:0004784  — enables — superoxide dismutase activity
  • GO:0046872  — enables — metal ion binding
  • GO:0010043  — acts upstream of or within — response to zinc ion
  • GO:0005829  — located in — cytosol
  • GO:0005739  — is active in — mitochondrion
  • GO:0005507  — enables — copper ion binding

Literature:

Sequences:

cDNA Sequence
  • >AT3G10920.2
    ACTTATACACATGTTCATTTTTGGCGACCACTAGAAGGAGAAACAAATCTTCATTCCAACAATGGCGATTCGTTGTGTAGCGAGTAGAAAAACCCTAGCCGGCTTGAAGGAGACATCATCGAGGCTATTGAGGATCAGAGGGATTCAGACTTTTACGCTTCCTGATCTTCCTTACGATTATGGCGCATTGGAACCGGCCATTAGTGGAGAGATCATGCAGATTCATCACCAGAAGCATCACCAGGCTTATGTTACTAATTACAATAATGCTCTTGAGCAGCTTGATCAAGCTGTGAACAAGGGAGATGCTTCCACTGTTGTTAAGTTGCAGAGCGCCATCAAATTCAACGGCGGAGGTCATGTCAACCATTCGATTTTCTGGAAGAACCTTGCTCCTTCCAGTGAAGGTGGTGGAGAGCCACCAAAAGGATCTCTTGGTAGTGCCATTGACGCTCACTTTGGCTCCCTTGAAGGTCTGGTGAAAAAGATGAGTGCTGAGGGTGCTGCAGTGCAAGGCTCAGGATGGTGGCTCGGACTAGACAAAGAACTGAAGAAGCTAGTTGTTGACACAACTGCCAATCAGGATCCATTAGTGACAAAAGGAGGAAGCTTGGTACCTCTGGTGGGTATAGATGTTTGGGAGCACGCCTACTACTTGCAGTACAAAAATGTGAGGCCTGAGTATCTGAAGAATGTATGGAAAGTGATCAACTGGAAATATGCAAGCGAGGTTTATGAGAAGGAAAACAACTGAATCGTTTACACGATGACATAAGGAGATGAACCAGTTCCAGCTCAGCTTTTGTTTTAAGGTTGTCTGAAACAAACTTACAGTGTCTCTTTGGTTTTTAAGATTTGCTCAACTCAGCTGTGTGGTACGTTGTTTTACAATGAAAGTTTTCAAGAATAAAAATTTGCTATTATTGTCAGAAAGCGCTATTGTTTATTCTACGAAGAAAACAAAACGGAATCTTATTGGTATAATAATTACCTCATTTCAATAAAACAATAACTAATTTTCTCGTT
  • >AT3G10920.1
    ACTTATACACATGTTCATTTTTGGCGACCACTAGAAGGAGAAACAAATCTTCATTCCAACAATGGCGATTCGTTGTGTAGCGAGTAGAAAAACCCTAGCCGGCTTGAAGGAGACATCATCGAGGCTATTGAGGATCAGAGGGATTCAGACTTTTACGCTTCCTGATCTTCCTTACGATTATGGCGCATTGGAACCGGCCATTAGTGGAGAGATCATGCAGATTCATCACCAGAAGCATCACCAGGCTTATGTTACTAATTACAATAATGCTCTTGAGCAGCTTGATCAAGCTGTGAACAAGGGAGATGCTTCCACTGTTGTTAAGTTGCAGAGCGCCATCAAATTCAACGGCGGAGGTCATGTCAACCATTCGATTTTCTGGAAGAACCTTGCTCCTTCCAGTGAAGGTGGTGGAGAGCCACCAAAAGGATCTCTTGGTAGTGCCATTGACGCTCACTTTGGCTCCCTTGAAGGTCTGGTGAAAAAGATGAGTGCTGAGGGTGCTGCAGTGCAAGGCTCAGGATGGTGGCTCGGACTAGACAAAGAACTGAAGAAGCTAGTTGTTGACACAACTGCCAATCAGGATCCATTAGTGACAAAAGGAGGAAGCTTGGTACCTCTGGTGGGTATAGATGTTTGGGAGCACGCCTACTACTTGCAGTACAAAAATGTGAGGCCTGAGTATCTGAAGAATGTATGGAAAGTGATCAACTGGAAATATGCAAGCGAGGTTTATGAGAAGGAAAACAACTGAATCGTTTACACGATGACATAAGGAGATGAACCAGTTCCAGCTCAGCTTTTGTTTTAAGGTTGTCTGAAACAAACTTACAGTGTCTCTTTGGTTTTTAAGATTTGCTCAACTCAGCTGTGTGGTACGTTGTTTTACAATGAAAGTTTTCAAGAATAAAAATTTGCTATTATTGTCAGAAAGCGCTATTGTTTATTCTACGAAGAAAACAAAACGGAATCTTATTGGTATAATAATTACCTCATTTCAATAAAACAATAACTAATTTTCTCGTT
CDS Sequence
  • >AT3G10920.2
    ATGGCGATTCGTTGTGTAGCGAGTAGAAAAACCCTAGCCGGCTTGAAGGAGACATCATCGAGGCTATTGAGGATCAGAGGGATTCAGACTTTTACGCTTCCTGATCTTCCTTACGATTATGGCGCATTGGAACCGGCCATTAGTGGAGAGATCATGCAGATTCATCACCAGAAGCATCACCAGGCTTATGTTACTAATTACAATAATGCTCTTGAGCAGCTTGATCAAGCTGTGAACAAGGGAGATGCTTCCACTGTTGTTAAGTTGCAGAGCGCCATCAAATTCAACGGCGGAGGTCATGTCAACCATTCGATTTTCTGGAAGAACCTTGCTCCTTCCAGTGAAGGTGGTGGAGAGCCACCAAAAGGATCTCTTGGTAGTGCCATTGACGCTCACTTTGGCTCCCTTGAAGGTCTGGTGAAAAAGATGAGTGCTGAGGGTGCTGCAGTGCAAGGCTCAGGATGGTGGCTCGGACTAGACAAAGAACTGAAGAAGCTAGTTGTTGACACAACTGCCAATCAGGATCCATTAGTGACAAAAGGAGGAAGCTTGGTACCTCTGGTGGGTATAGATGTTTGGGAGCACGCCTACTACTTGCAGTACAAAAATGTGAGGCCTGAGTATCTGAAGAATGTATGGAAAGTGATCAACTGGAAATATGCAAGCGAGGTTTATGAGAAGGAAAACAACTGA
  • >AT3G10920.1
    ATGGCGATTCGTTGTGTAGCGAGTAGAAAAACCCTAGCCGGCTTGAAGGAGACATCATCGAGGCTATTGAGGATCAGAGGGATTCAGACTTTTACGCTTCCTGATCTTCCTTACGATTATGGCGCATTGGAACCGGCCATTAGTGGAGAGATCATGCAGATTCATCACCAGAAGCATCACCAGGCTTATGTTACTAATTACAATAATGCTCTTGAGCAGCTTGATCAAGCTGTGAACAAGGGAGATGCTTCCACTGTTGTTAAGTTGCAGAGCGCCATCAAATTCAACGGCGGAGGTCATGTCAACCATTCGATTTTCTGGAAGAACCTTGCTCCTTCCAGTGAAGGTGGTGGAGAGCCACCAAAAGGATCTCTTGGTAGTGCCATTGACGCTCACTTTGGCTCCCTTGAAGGTCTGGTGAAAAAGATGAGTGCTGAGGGTGCTGCAGTGCAAGGCTCAGGATGGTGGCTCGGACTAGACAAAGAACTGAAGAAGCTAGTTGTTGACACAACTGCCAATCAGGATCCATTAGTGACAAAAGGAGGAAGCTTGGTACCTCTGGTGGGTATAGATGTTTGGGAGCACGCCTACTACTTGCAGTACAAAAATGTGAGGCCTGAGTATCTGAAGAATGTATGGAAAGTGATCAACTGGAAATATGCAAGCGAGGTTTATGAGAAGGAAAACAACTGA
Protein Sequence
  • >AT3G10920.2
    MAIRCVASRKTLAGLKETSSRLLRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEKENN
  • >AT3G10920.1
    MAIRCVASRKTLAGLKETSSRLLRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHHQAYVTNYNNALEQLDQAVNKGDASTVVKLQSAIKFNGGGHVNHSIFWKNLAPSSEGGGEPPKGSLGSAIDAHFGSLEGLVKKMSAEGAAVQGSGWWLGLDKELKKLVVDTTANQDPLVTKGGSLVPLVGIDVWEHAYYLQYKNVRPEYLKNVWKVINWKYASEVYEKENN