Gene Details:

• Gene ID: AT3G10690
• Gene Symbol: GYRA
• Gene Name: DNA GYRASE A
• Description: DNA GYRASE A;(source:Araport11)
• TAIR Accession: locus:2075765
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT3G10690.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)

Gene Ontology:

• GO:0003918  — contributes to — DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
• GO:0009330  — part of — DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
• GO:0034335  — contributes to — DNA negative supercoiling activity
• GO:0005737  — is active in — cytoplasm
• GO:0042644  — located in — chloroplast nucleoid
• GO:0009507  — located in — chloroplast
• GO:0016592  — part of — mediator complex
• GO:0003916  — enables — DNA topoisomerase activity
• GO:0006265  — involved in — DNA topological change
• GO:0005524  — enables — ATP binding
• GO:0003677  — enables — DNA binding
• GO:0005694  — located in — chromosome
• GO:0005739  — located in — mitochondrion

Germplasm Phenotype:

• gyra-3  — Resistant to ciprofloxacin. Normal chloroplast morphology in presence of the drug.

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure

Literature:

• Nuclear genes that encode mitochondrial proteins for DNA and RNA metabolism are clustered in the Arabidopsis genome.   DOI:  10.1105/tpc.010009 ;  PMID:  12837951
• Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation.   DOI:  10.1242/jcs.00715 ;  PMID:  12953064
• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.   DOI:  10.1105/tpc.016055 ;  PMID:  14671022
• Genome-wide identification of potential plant E2F target genes.   DOI:  10.1104/pp.105.066290 ;  PMID:  16126853
• pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression.   DOI:  10.1105/tpc.105.036392 ;  PMID:  16326926
• Purification of a plant mediator from Arabidopsis thaliana identifies PFT1 as the Med25 subunit.   DOI:  10.1016/j.molcel.2007.05.007 ;  PMID:  17560376
• Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis.   DOI:  10.1104/pp.110.168120 ;  PMID:  21139083
• Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.   DOI:  10.1105/tpc.016055 ;  PMID:  14671022
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• pTAC2, -6, and -12 are components of the transcriptionally active plastid chromosome that are required for plastid gene expression.   DOI:  10.1105/tpc.105.036392 ;  PMID:  16326926
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481

Sequences: