Gene Details:
- Gene ID: AT3G10670
- Gene Symbol: ABCI6, ATNAP7, NAP7
- Gene Name: ATP-binding cassette I6, non-intrinsic ABC protein 7, non-intrinsic ABC protein 7
- Description: non-intrinsic ABC protein 7;(source:Araport11)
- TAIR Accession: locus:2075880
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000229 — flower meristem — floral meristem (exact), mersitema floral (Spanish, exact), 花芽分裂組織 (Japanese, exact), floral apical meristem (related), Poaceae floret meristem (narrow), ear floret meristem (narrow), floret meristem (narrow), tassel floret meristem (narrow)
- PO:0006079 — shoot system meristem — meristema del epiblasto (epiblastema) (Spanish, exact), シュート分裂組織 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0020147 — root apical meristem — RAM (exact), meristema apical de la raíz (Spanish, exact), 根端分裂組織 (Japanese, exact), promeristem (broad)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0022857 — enables — transmembrane transporter activity
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0009570 — located in — chloroplast stroma
- GO:0005829 — located in — cytosol
- GO:0016226 — acts upstream of or within — iron-sulfur cluster assembly
- GO:0009507 — located in — chloroplast
- GO:0010027 — acts upstream of or within — thylakoid membrane organization
- GO:0005515 — enables — protein binding
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0042626 — enables — ATPase-coupled transmembrane transporter activity
Function-related keywords:
- flower meristem , shoot system meristem , plant embryo , root apical meristem , shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- A plastidic ABC protein involved in intercompartmental communication of light signaling. DOI: 10.1101/gad.850101 ; PMID: 11156608
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- AtNAP7 is a plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. DOI: 10.1073/pnas.0400799101 ; PMID: 15184673
- Inventory and comparative analysis of rice and Arabidopsis ATP-binding cassette (ABC) systems. DOI: 10.1016/j.jmb.2004.07.093 ; PMID: 15381434
- AtNAP1 represents an atypical SufB protein in Arabidopsis plastids. DOI: 10.1074/jbc.M413082200 ; PMID: 15611066
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DOI: 10.1093/dnares/dsl013 ; PMID: 17164256
- Altered profile of secondary metabolites in the root exudates of Arabidopsis ATP-binding cassette transporter mutants. DOI: 10.1104/pp.107.109587 ; PMID: 18065561
- Plant ABC proteins–a unified nomenclature and updated inventory. DOI: 10.1016/j.tplants.2008.02.001 ; PMID: 18299247
- Genome analysis of Chlamydomonas reinhardtii reveals the existence of multiple, compartmentalized iron-sulfur protein assembly machineries of different evolutionary origins. DOI: 10.1534/genetics.107.086033 ; PMID: 18493040
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT3G10670.1
CCATTTTAATTAAGCTAGTAGCCGATATATATATTACGTGGCATTCAACATGTGAAATTAAAAGAATCCCTGGACCTAACTAACCACATCACTTCACCGGATAAAACCTCCACCGTCTTCTTCCGCCGCAATTTCTGTCTCCATGGCCGGCGTTAACCTACAGCTCCGTCACGCATACTCCATAGCTCAATTCGTTCCAACTGTTTCTTCTCCTCCTCCTCTTCCTACTCAGCGAGTTCGCCTCGGGACTTCACCCTCTCGTGTTCTATTATGCAATCTCCGAGCTAATTCCGCCGCCGCTCCAATCCTGCGAACTACTCGCCGTTCAGTTATTGTTTCGGCGTCTTCCGTATCCTCAGCCGTCGATTCGGATTCGTTGGTGGAAGATCGTGATGACGTGGGGAGGATCCCGTTGCTTGAAGTTAGGGATTTGAGAGCAGTGATTGCTGAATCGAGACAAGAGATACTGAAAGGCGTCAATTTGGTTGTCTACGAAGGAGAGGTTCACGCAGTGATGGGGAAGAACGGTTCAGGAAAGAGCACGTTTTCGAAGGTTCTTGTTGGTCATCCCGATTATGAAGTGACGGGAGGGAGTATTGTGTTTAAAGGGCAGAATCTACTTGATATGGAACCAGAGGATAGATCTCTTGCCGGTCTCTTTATGAGTTTCCAGTCCCCAGTTGAGATCCCTGGTGTTAGCAATATGGATTTCTTGAATATGGCATTCAATGCTCGGAAAAGAAAGCTTGGTCAGCCAGAGCTTGATCCAATCCAGTTCTACAGCCACTTGGTATCAAAACTCGAAGTTGTGAATATGAAGACCGATTTTCTCAACAGAAATGTCAATGAAGGATTTAGTGGTGGTGAAAGGAAACGCAATGAGATTCTACAGTTAGCGGTCCTTGGAGCTGAGTTGGCTATACTGGACGAGATTGATTCAGGGTTGGATGTTGATGCTCTTCAAGATGTGGCAAAGGCGGTGAACGGGCTTTTGACACCAAAAAACTCTGTTCTGATGATAACGCACTACCAACGCCTACTTGACTACATCAAACCAACTCTCATACATATCATGGAGAATGGGAGAATCATTAAAACCGGAGACAACTCCTTGGCCAAACTACTGGAAAAGGAAGGCTACAAAGCGATATCCGGTTAGTTATCGCGGATCATACATATAACCTGTCTTCCTTCTTTGAGAGACCATGGTTATTATATGGGACAAATACAATGGAAGCTAAAGCTGATGATTGGAAACTGAAATCTATCACTACAATCTTTGACCCGTAGTTTTGGTTTGCAATTTGCATGACAAACTACTTTATTGGGATGTGAACAGTATTCCACACCTTTTTGTAACTAACAAGTTTAAAATTCAGTTAATAAATTTTGTTATTATAAATGCTCTTATAAAGTTTGAGACTTTAAGTGGATCAAATCCAATCAAACCTAGTGGTTACTTACATTACTTGAGAAATTT
CDS Sequence
- >AT3G10670.1
ATGGCCGGCGTTAACCTACAGCTCCGTCACGCATACTCCATAGCTCAATTCGTTCCAACTGTTTCTTCTCCTCCTCCTCTTCCTACTCAGCGAGTTCGCCTCGGGACTTCACCCTCTCGTGTTCTATTATGCAATCTCCGAGCTAATTCCGCCGCCGCTCCAATCCTGCGAACTACTCGCCGTTCAGTTATTGTTTCGGCGTCTTCCGTATCCTCAGCCGTCGATTCGGATTCGTTGGTGGAAGATCGTGATGACGTGGGGAGGATCCCGTTGCTTGAAGTTAGGGATTTGAGAGCAGTGATTGCTGAATCGAGACAAGAGATACTGAAAGGCGTCAATTTGGTTGTCTACGAAGGAGAGGTTCACGCAGTGATGGGGAAGAACGGTTCAGGAAAGAGCACGTTTTCGAAGGTTCTTGTTGGTCATCCCGATTATGAAGTGACGGGAGGGAGTATTGTGTTTAAAGGGCAGAATCTACTTGATATGGAACCAGAGGATAGATCTCTTGCCGGTCTCTTTATGAGTTTCCAGTCCCCAGTTGAGATCCCTGGTGTTAGCAATATGGATTTCTTGAATATGGCATTCAATGCTCGGAAAAGAAAGCTTGGTCAGCCAGAGCTTGATCCAATCCAGTTCTACAGCCACTTGGTATCAAAACTCGAAGTTGTGAATATGAAGACCGATTTTCTCAACAGAAATGTCAATGAAGGATTTAGTGGTGGTGAAAGGAAACGCAATGAGATTCTACAGTTAGCGGTCCTTGGAGCTGAGTTGGCTATACTGGACGAGATTGATTCAGGGTTGGATGTTGATGCTCTTCAAGATGTGGCAAAGGCGGTGAACGGGCTTTTGACACCAAAAAACTCTGTTCTGATGATAACGCACTACCAACGCCTACTTGACTACATCAAACCAACTCTCATACATATCATGGAGAATGGGAGAATCATTAAAACCGGAGACAACTCCTTGGCCAAACTACTGGAAAAGGAAGGCTACAAAGCGATATCCGGTTAG
Protein Sequence
- >AT3G10670.1
MAGVNLQLRHAYSIAQFVPTVSSPPPLPTQRVRLGTSPSRVLLCNLRANSAAAPILRTTRRSVIVSASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAESRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIPGVSNMDFLNMAFNARKRKLGQPELDPIQFYSHLVSKLEVVNMKTDFLNRNVNEGFSGGERKRNEILQLAVLGAELAILDEIDSGLDVDALQDVAKAVNGLLTPKNSVLMITHYQRLLDYIKPTLIHIMENGRIIKTGDNSLAKLLEKEGYKAISG