AT3G09840

Gene Details

Gene ID: AT3G09840
Gene Symbol: ATCDC48, AtCDC48A, CDC48, CDC48A
Gene Name: cell division cycle 48
Description: cell division cycle 48;(source:Araport11)
TAIR Accession: locus:2085064
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)

GO:0009860 — acts upstream of or within — pollen tube growth
GO:0031593 — enables — polyubiquitin modification-dependent protein binding
GO:0030970 — involved in — retrograde protein transport, ER to cytosol
GO:0071712 — involved in — ER-associated misfolded protein catabolic process
GO:0005730 — located in — nucleolus
GO:0009846 — acts upstream of or within — pollen germination
GO:0097352 — involved in — autophagosome maturation
GO:0031348 — acts upstream of or within — negative regulation of defense response
GO:0051228 — involved in — mitotic spindle disassembly
GO:0034098 — part of — VCP-NPL4-UFD1 AAA ATPase complex
GO:0005886 — located in — plasma membrane
GO:0005515 — enables — protein binding
GO:0005811 — located in — lipid droplet
GO:0005819 — located in — spindle
GO:0016310 — has protein modification of type — phosphorylation
GO:0042802 — enables — identical protein binding
GO:0030433 — involved in — ubiquitin-dependent ERAD pathway
GO:0022626 — located in — cytosolic ribosome
GO:0005737 — located in — cytoplasm
GO:0005794 — located in — Golgi apparatus
GO:0016887 — enables — ATP hydrolysis activity
GO:0009505 — located in — plant-type cell wall
GO:0031648 — acts upstream of or within — protein destabilization

CS69995 — Mildly dwarf plants with slightly curled leaves. Partly sterile; produces very small siliques with few seeds. Elevated PR2 gene expression and SNC1 protein level. Significantly enhanced disease resistance to the oomycete pathogen Hyaloperonospora arabidopsidis (H.a.) Noco2.
cdc48-1 — Heterozygotes have reduced transmission due to defects in pollen tube germination and elongation.
cdc48-1 — Seedling lethal.Mutants have disorganized roots.
cdc48A-4 — Mildly dwarf phenotype and slightly curled leaves, suggesting a constitutive immune response, significantly enhanced disease resistance to H.a. Noco2, weak enhanced resistance phenotype, elevated SNC1 protein.

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT3G09840.1
GTCGGTTTGATATTACTAGAAGATAAGAAACAAAAAGGAAAATAAGAATAAAGGAAAAAAAAAGAGCTCTCTTTTCCAACAAGAAACGTAGAGAGATATAATTAGAGAAAATCTGTGCTCTTTCAGATCCCATTATCACAAATCCATCTCTCTCTCTCTCTCAGAGAAGAAACCAAAGAAGAAGAAAAAGCTCTCAACTTTCTTCGATTTCTCAGGGAACTCTTTCGTTAATCTCAAACTCAATCATGTCTACCCCAGCTGAATCTTCAGACTCGAAATCGAAGAAAGATTTCAGTACTGCTATTCTCGAGAGGAAGAAGTCTCCGAACCGTCTCGTCGTCGATGAGGCTATCAACGATGATAACTCCGTCGTCTCTCTTCACCCTGCAACCATGGAGAAGCTTCAGCTCTTCCGTGGTGATACCATTCTCATCAAGGGTAAGAAGAGGAAGGACACTGTCTGCATTGCTCTTGCTGATGAGACATGTGAGGAGCCAAAGATCAGAATGAATAAAGTAGTCAGATCTAACTTGAGGGTTAGACTGGGAGATGTTATATCTGTTCACCAATGCCCAGACGTCAAGTACGGAAAGCGTGTTCACATCCTGCCTGTTGATGATACTGTTGAAGGAGTGACTGGAAACCTATTTGATGCTTACCTGAAACCTTATTTCCTTGAGGCATACCGTCCAGTGAGGAAGGGTGATCTCTTCCTAGTCAGAGGAGGAATGAGGAGTGTGGAGTTCAAAGTTATAGAGACAGATCCTGCTGAGTACTGCGTGGTTGCTCCAGACACAGAGATTTTCTGTGAGGGTGAGCCTGTGAAGAGAGAGGATGAAGAAAGGCTAGATGATGTAGGTTATGATGATGTTGGTGGTGTCAGGAAACAGATGGCTCAGATTAGGGAACTTGTTGAACTTCCCTTGAGGCATCCACAGCTATTCAAGTCGATTGGTGTTAAGCCACCGAAGGGAATTCTTCTTTATGGACCACCTGGGTCTGGAAAGACTTTGATCGCTCGTGCTGTGGCTAATGAAACGGGTGCCTTTTTCTTCTGTATCAACGGACCTGAGATCATGTCCAAATTGGCTGGTGAGAGTGAGAGCAACCTCAGGAAAGCATTCGAGGAGGCTGAGAAAAATGCGCCTTCAATCATATTCATTGATGAGATCGACTCTATTGCACCGAAAAGAGAGAAGACTAATGGAGAGGTTGAGAGGAGGATTGTCTCTCAGCTCCTTACGCTAATGGATGGACTGAAATCTCGTGCTCATGTTATCGTCATGGGAGCAACCAATCGCCCCAACAGTATCGACCCAGCTTTGAGAAGGTTTGGAAGATTTGACAGGGAGATCGATATTGGAGTTCCTGACGAAATTGGACGTCTTGAAGTTCTGAGGATCCATACAAAGAACATGAAGCTGGCTGAAGATGTGGATCTCGAAAGGATCTCAAAGGACACACACGGTTACGTCGGTGCTGATCTTGCAGCTTTGTGCACAGAGGCCGCCCTGCAATGCATCAGGGAGAAGATGGATGTGATTGATCTGGAAGATGACTCCATAGACGCTGAAATCCTCAATTCCATGGCAGTCACTAATGAACATTTCCACACTGCTCTCGGGAACAGCAACCCATCTGCACTTCGTGAAACTGTTGTGGAGGTTCCCAACGTCTCTTGGAATGATATTGGAGGTCTTGAGAATGTCAAGAGAGAGCTCCAGGAGACTGTTCAATACCCAGTCGAGCACCCAGAGAAGTTTGAGAAATTCGGGATGTCTCCATCAAAGGGAGTCCTTTTCTACGGTCCTCCTGGATGTGGGAAAACCCTTTTGGCCAAAGCTATTGCCAACGAGTGCCAAGCTAATTTCATCAGTGTCAAGGGTCCCGAGCTTCTGACAATGTGGTTTGGAGAGAGTGAAGCAAATGTTCGTGAAATCTTCGACAAGGCCCGTCAATCCGCTCCATGTGTTCTTTTCTTTGATGAGCTCGACTCCATTGCAACTCAGAGAGGAGGTGGAAGTGGTGGCGATGGAGGTGGTGCTGCGGACAGAGTCTTGAACCAGCTTTTGACTGAGATGGACGGAATGAATGCCAAGAAAACCGTCTTCATCATCGGAGCTACCAACAGACCTGACATTATCGATTCAGCTCTTCTCCGTCCTGGAAGGCTTGACCAGCTCATTTACATTCCACTACCAGATGAGGATTCCCGTCTCAATATCTTCAAGGCCGCCTTGAGGAAATCTCCTATTGCTAAAGATGTAGACATCGGTGCACTTGCTAAATACACTCAGGGTTTCAGTGGTGCTGATATCACTGAGATTTGCCAGAGAGCTTGCAAGTACGCCATCAGAGAAAACATTGAGAAGGACATTGAAAAGGAGAAGAGGAGGAGCGAGAACCCAGAGGCAATGGAGGAAGATGGAGTGGATGAAGTATCAGAGATCAAAGCTGCACACTTTGAGGAGTCGATGAAGTATGCGCGTAGGAGTGTGAGTGATGCAGACATCAGGAAGTACCAAGCCTTTGCTCAGACGTTGCAGCAGTCTAGAGGGTTCGGTTCTGAGTTCAGGTTCGAGAATTCTGCTGGTTCAGGTGCCACCACTGGAGTCGCAGATCCGTTTGCCACGTCTGCAGCCGCTGCTGGGGACGATGATGATCTCTACAATTAGTGATAACTTCTTTATCCTTTTTTTTTTTAAGTTTTAAAACTCGAATTCTCTACTTTTGGATTACTGGGGAAAGTGATACTGATTCTTTCCTCGTGTTTTTAAGTTATCCGAATCTCTTGTGTTTGGGTTTTAATCAATGTTCTTAATTTTCGTTTCAATACTTGTTTGGTCGTTCATTACAAATGGAAAAAATAAAGGATTATAAAGTAAGTTAAAAAGA

CDS Sequence

>AT3G09840.1
ATGTCTACCCCAGCTGAATCTTCAGACTCGAAATCGAAGAAAGATTTCAGTACTGCTATTCTCGAGAGGAAGAAGTCTCCGAACCGTCTCGTCGTCGATGAGGCTATCAACGATGATAACTCCGTCGTCTCTCTTCACCCTGCAACCATGGAGAAGCTTCAGCTCTTCCGTGGTGATACCATTCTCATCAAGGGTAAGAAGAGGAAGGACACTGTCTGCATTGCTCTTGCTGATGAGACATGTGAGGAGCCAAAGATCAGAATGAATAAAGTAGTCAGATCTAACTTGAGGGTTAGACTGGGAGATGTTATATCTGTTCACCAATGCCCAGACGTCAAGTACGGAAAGCGTGTTCACATCCTGCCTGTTGATGATACTGTTGAAGGAGTGACTGGAAACCTATTTGATGCTTACCTGAAACCTTATTTCCTTGAGGCATACCGTCCAGTGAGGAAGGGTGATCTCTTCCTAGTCAGAGGAGGAATGAGGAGTGTGGAGTTCAAAGTTATAGAGACAGATCCTGCTGAGTACTGCGTGGTTGCTCCAGACACAGAGATTTTCTGTGAGGGTGAGCCTGTGAAGAGAGAGGATGAAGAAAGGCTAGATGATGTAGGTTATGATGATGTTGGTGGTGTCAGGAAACAGATGGCTCAGATTAGGGAACTTGTTGAACTTCCCTTGAGGCATCCACAGCTATTCAAGTCGATTGGTGTTAAGCCACCGAAGGGAATTCTTCTTTATGGACCACCTGGGTCTGGAAAGACTTTGATCGCTCGTGCTGTGGCTAATGAAACGGGTGCCTTTTTCTTCTGTATCAACGGACCTGAGATCATGTCCAAATTGGCTGGTGAGAGTGAGAGCAACCTCAGGAAAGCATTCGAGGAGGCTGAGAAAAATGCGCCTTCAATCATATTCATTGATGAGATCGACTCTATTGCACCGAAAAGAGAGAAGACTAATGGAGAGGTTGAGAGGAGGATTGTCTCTCAGCTCCTTACGCTAATGGATGGACTGAAATCTCGTGCTCATGTTATCGTCATGGGAGCAACCAATCGCCCCAACAGTATCGACCCAGCTTTGAGAAGGTTTGGAAGATTTGACAGGGAGATCGATATTGGAGTTCCTGACGAAATTGGACGTCTTGAAGTTCTGAGGATCCATACAAAGAACATGAAGCTGGCTGAAGATGTGGATCTCGAAAGGATCTCAAAGGACACACACGGTTACGTCGGTGCTGATCTTGCAGCTTTGTGCACAGAGGCCGCCCTGCAATGCATCAGGGAGAAGATGGATGTGATTGATCTGGAAGATGACTCCATAGACGCTGAAATCCTCAATTCCATGGCAGTCACTAATGAACATTTCCACACTGCTCTCGGGAACAGCAACCCATCTGCACTTCGTGAAACTGTTGTGGAGGTTCCCAACGTCTCTTGGAATGATATTGGAGGTCTTGAGAATGTCAAGAGAGAGCTCCAGGAGACTGTTCAATACCCAGTCGAGCACCCAGAGAAGTTTGAGAAATTCGGGATGTCTCCATCAAAGGGAGTCCTTTTCTACGGTCCTCCTGGATGTGGGAAAACCCTTTTGGCCAAAGCTATTGCCAACGAGTGCCAAGCTAATTTCATCAGTGTCAAGGGTCCCGAGCTTCTGACAATGTGGTTTGGAGAGAGTGAAGCAAATGTTCGTGAAATCTTCGACAAGGCCCGTCAATCCGCTCCATGTGTTCTTTTCTTTGATGAGCTCGACTCCATTGCAACTCAGAGAGGAGGTGGAAGTGGTGGCGATGGAGGTGGTGCTGCGGACAGAGTCTTGAACCAGCTTTTGACTGAGATGGACGGAATGAATGCCAAGAAAACCGTCTTCATCATCGGAGCTACCAACAGACCTGACATTATCGATTCAGCTCTTCTCCGTCCTGGAAGGCTTGACCAGCTCATTTACATTCCACTACCAGATGAGGATTCCCGTCTCAATATCTTCAAGGCCGCCTTGAGGAAATCTCCTATTGCTAAAGATGTAGACATCGGTGCACTTGCTAAATACACTCAGGGTTTCAGTGGTGCTGATATCACTGAGATTTGCCAGAGAGCTTGCAAGTACGCCATCAGAGAAAACATTGAGAAGGACATTGAAAAGGAGAAGAGGAGGAGCGAGAACCCAGAGGCAATGGAGGAAGATGGAGTGGATGAAGTATCAGAGATCAAAGCTGCACACTTTGAGGAGTCGATGAAGTATGCGCGTAGGAGTGTGAGTGATGCAGACATCAGGAAGTACCAAGCCTTTGCTCAGACGTTGCAGCAGTCTAGAGGGTTCGGTTCTGAGTTCAGGTTCGAGAATTCTGCTGGTTCAGGTGCCACCACTGGAGTCGCAGATCCGTTTGCCACGTCTGCAGCCGCTGCTGGGGACGATGATGATCTCTACAATTAG

Protein Sequence

>AT3G09840.1
MSTPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFENSAGSGATTGVADPFATSAAAAGDDDDLYN